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聚乙二醇对角蛋白游离巯基的保护作用及对材料性能的影响
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作者 袁久刚 张宇婷 +3 位作者 周爱晖 代琛露 徐进 范雪荣 《高分子材料科学与工程》 EI CAS CSCD 北大核心 2023年第3期148-154,162,共8页
游离巯基很容易连接形成二硫键,对角蛋白溶液的稳定性及再生蛋白韧性都会产生不良影响,因此对巯基进行适当保护有助于提升角蛋白的性能。为此,文中分别选择聚乙二醇(PEG)、聚乙烯醇(PVA)及十二烷基硫酸钠(SDS)3种物质分析其对巯基的保... 游离巯基很容易连接形成二硫键,对角蛋白溶液的稳定性及再生蛋白韧性都会产生不良影响,因此对巯基进行适当保护有助于提升角蛋白的性能。为此,文中分别选择聚乙二醇(PEG)、聚乙烯醇(PVA)及十二烷基硫酸钠(SDS)3种物质分析其对巯基的保护效果。以保护效果最好的PEG为例,分析了其相对分子质量和浓度对巯基保护效果的影响,同时采用动态光散射、荧光光谱及拉曼光谱对其胶束粒径、疏水氨基酸暴露程度和角蛋白二级构象等进行了测试表征。结果显示,PEG可以通过疏水作用力和氢键等方式与角蛋白分子间形成高分子复合物,PEG相对分子质量越大、浓度越高,所形成的复合物粒径就越大,保护效果也越好;而且,复合物能使角蛋白分子舒展,减弱了巯基无序交联形成二硫键的比例,在固化后的角蛋白混合膜中,二级结构变得规整有序,膜的柔韧性和透光性均显著增加。 展开更多
关键词 角蛋白 聚乙二醇 巯基保护 二硫键 复合物
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Orbital-Free Density Functional Theory for Molecular Structure Calculations 被引量:1
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作者 Huajie Chen aihui zhou 《Numerical Mathematics(Theory,Methods and Applications)》 SCIE 2008年第1期1-28,共28页
We give here an overview of the orbital-flee density functional theory that is used for modeling atoms and molecules. We review typical approximations to the kinetic energy, exchange-correlation corrections to the k... We give here an overview of the orbital-flee density functional theory that is used for modeling atoms and molecules. We review typical approximations to the kinetic energy, exchange-correlation corrections to the kinetic and Hartree energies, and constructions of the pseudopotentials. We discuss numerical discretizations for the orbital-free methods and include several numerical results for illustrations. 展开更多
关键词 Density functional theory molecular structure numerical discretization orbital-free
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Convergent and Orthogonality Preserving Schemes for Approximating the Kohn-Sham Orbitals
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作者 Xiaoying Dai Liwei Zhang aihui zhou 《Numerical Mathematics(Theory,Methods and Applications)》 SCIE CSCD 2023年第1期1-25,共25页
To obtain convergent numerical approximations without using any orthogonalization operations is of great importance in electronic structure calculations.In this paper,we propose and analyze a class of iteration scheme... To obtain convergent numerical approximations without using any orthogonalization operations is of great importance in electronic structure calculations.In this paper,we propose and analyze a class of iteration schemes for the discretized Kohn-Sham Density Functional Theory model,with which the iterative approximations are guaranteed to converge to the Kohn-Sham orbitals without any orthogonalization as long as the initial orbitals are orthogonal and the time step sizes are given properly.In addition,we present a feasible and efficient approach to get suitable time step sizes and report some numerical experiments to validate our theory. 展开更多
关键词 Gradient flow based model density functional theory orthogonality preserving scheme convergence temporal discretization
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LOCAL AND PARALLEL FINITE ELEMENT ALGORITHMS FOR THE NAVIER-STOKES PROBLEM 被引量:17
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作者 Yinnian He Jinchao Xu aihui zhou 《Journal of Computational Mathematics》 SCIE EI CSCD 2006年第3期227-238,共12页
Based on two-grid discretizations, in this paper, some new local and parallel finite element algorithms are proposed and analyzed for the stationary incompressible Navier- Stokes problem. These algorithms are motivate... Based on two-grid discretizations, in this paper, some new local and parallel finite element algorithms are proposed and analyzed for the stationary incompressible Navier- Stokes problem. These algorithms are motivated by the observation that for a solution to the Navier-Stokes problem, low frequency components can be approximated well by a relatively coarse grid and high frequency components can be computed on a fine grid by some local and parallel procedure. One major technical tool for the analysis is some local a priori error estimates that are also obtained in this paper for the finite element solutions on general shape-regular grids. 展开更多
关键词 Navier-Stokes problem Finite element Two-grid method Local and parallel algorithm.
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FINITE ELEMENT APPROXIMATIONS FOR SCHRDINGER EQUATIONS WITH APPLICATIONS TO ELECTRONIC STRUCTURE COMPUTATIONS 被引量:7
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作者 Xin-Gao Gong Lihua Shen +1 位作者 Dier Zhang aihui zhou 《Journal of Computational Mathematics》 SCIE CSCD 2008年第3期310-323,共14页
In this paper, both the standard finite element discretization and a two-scale finite element discretization for SchrSdinger equations are studied. The numerical analysis is based on the regularity that is also obtain... In this paper, both the standard finite element discretization and a two-scale finite element discretization for SchrSdinger equations are studied. The numerical analysis is based on the regularity that is also obtained in this paper for the Schroedinger equations. Very satisfying applications to electronic structure computations are provided, too. 展开更多
关键词 Error analysis Finite element EIGENVALUE Quantum chemistry Schroedinger equation TWO-SCALE
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A mathematical aspect of Hohenberg-Kohn theorem 被引量:3
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作者 aihui zhou 《Science China Mathematics》 SCIE CSCD 2019年第1期63-68,共6页
The Hohenberg-Kohn theorem plays a fundamental role in density functional theory, which has become the most popular and powerful computational approach to study the electronic structure of matter.In this article, we s... The Hohenberg-Kohn theorem plays a fundamental role in density functional theory, which has become the most popular and powerful computational approach to study the electronic structure of matter.In this article, we study the Hohenberg-Kohn theorem for a class of external potentials based on a unique continuation principle. 展开更多
关键词 density functional theory electronic structure UNIQUE CONTINUATION PRINCIPLE Hohenberg-Kohn THEOREM
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A TWO-SCALE HIGHER-ORDER FINITE ELEMENT DISCRETIZATION FOR SCHRDINGER EQUATION 被引量:3
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作者 Huajie Chen Fang Liu aihui zhou 《Journal of Computational Mathematics》 SCIE CSCD 2009年第2期315-337,共23页
In this paper, a two-scale higher-order finite element discretization scheme is proposed and analyzed for a Schroedinger equation on tensor product domains. With the scheme, the solution of the eigenvalue problem on a... In this paper, a two-scale higher-order finite element discretization scheme is proposed and analyzed for a Schroedinger equation on tensor product domains. With the scheme, the solution of the eigenvalue problem on a fine grid can be reduced to an eigenvalue problem on a much coarser grid together with some eigenvalue problems on partially fine grids. It is shown theoretically and numerically that the proposed two-scale higher-order scheme not only significantly reduces the number of degrees of freedom but also produces very accurate approximations. 展开更多
关键词 HIGHER-ORDER Finite element DISCRETIZATION EIGENVALUE Schroedinger equation TWO-SCALE
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MULTI-LEVEL ADAPTIVE CORRECTIONS IN FINITE DIMENSIONAL APPROXIMATIONS 被引量:2
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作者 aihui zhou 《Journal of Computational Mathematics》 SCIE CSCD 2010年第1期45-54,共10页
Based on the Boolean sum technique, we introduce and analyze in this paper a class of multi-level iterative corrections for finite dimensional approximations. This type of multi-level corrections is adaptive and can p... Based on the Boolean sum technique, we introduce and analyze in this paper a class of multi-level iterative corrections for finite dimensional approximations. This type of multi-level corrections is adaptive and can produce highly accurate approximations. For illustration, we present some old and new finite element correction schemes for an elliptic boundary value problem. 展开更多
关键词 ADAPTIVE Boolean sum CORRECTION Finite dimensional MULTI-LEVEL
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TWO-SCALE FINITE ELEMENT GREEN'S FUNCTION APPROXIMATIONS WITH APPLICATIONS TO ELECTROSTATIC POTENTIAL COMPUTATION 被引量:1
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作者 Ying YANG aihui zhou 《Journal of Systems Science & Complexity》 SCIE EI CSCD 2010年第1期177-193,共17页
In this paper,a two-scale finite element approach is proposed and analyzed for approximationsof Green's function in three-dimensions.This approach is based on a two-scale finite elementspace defined,respectively,o... In this paper,a two-scale finite element approach is proposed and analyzed for approximationsof Green's function in three-dimensions.This approach is based on a two-scale finite elementspace defined,respectively,on the whole domain with size H and on some subdomain containing singularpoints with size h (h << H).It is shown that this two-scale discretization approach is very efficient.In particular,the two-scale discretization approach is applied to solve Poisson-Boltzmann equationssuccessfully. 展开更多
关键词 Error analysis finite element Green's function Poisson-Boltzmann equation two-scale.
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Adaptive Finite Element Approximations for a Class of Nonlinear Eigenvalue Problems in Quantum Physics
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作者 Huajie Chen Xingao Gong +1 位作者 Lianhua He aihui zhou 《Advances in Applied Mathematics and Mechanics》 SCIE 2011年第4期493-518,共26页
In this paper,we study an adaptive finite element method for a class of nonlinear eigenvalue problems resulting from quantum physics that may have a nonconvex energy functional.We prove the convergence of adaptive fin... In this paper,we study an adaptive finite element method for a class of nonlinear eigenvalue problems resulting from quantum physics that may have a nonconvex energy functional.We prove the convergence of adaptive finite element approximations and present several numerical examples of micro-structure of matter calculations that support our theory. 展开更多
关键词 Adaptive finite element CONVERGENCE MICRO-STRUCTURE nonlinear eigenvalue
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On the “Preconditioning” Function Used in Planewave DFT Calculations and its Generalization
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作者 Yunkai zhou James R.Chelikowsky +1 位作者 Xingyu Gao aihui zhou 《Communications in Computational Physics》 SCIE 2015年第6期167-179,共13页
The Teter,Payne,and Allan“preconditioning”function plays a significant role in planewave DFT calculations.This function is often called the TPA preconditioner.We present a detailed study of this“preconditioning”fu... The Teter,Payne,and Allan“preconditioning”function plays a significant role in planewave DFT calculations.This function is often called the TPA preconditioner.We present a detailed study of this“preconditioning”function.We develop a general formula that can readily generate a class of“preconditioning”functions.These functions have higher order approximation accuracy and fulfill the two essential“preconditioning”purposes as required in planewave DFT calculations.Our general class of functions are expected to have applications in other areas. 展开更多
关键词 Density functional theory planewave preconditioning function eigenvalue problem
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Parallel Mesh Refinement of Higher Order Finite Elements for Electronic Structure Calculations
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作者 Dier Zhang aihui zhou Xin-Gao Gong 《Communications in Computational Physics》 SCIE 2008年第10期1086-1105,共20页
The finite element method is a promising method for electronic structure calculations.In this paper,a new parallelmesh refinementmethod for electronic structure calculations is presented.Some properties of the method ... The finite element method is a promising method for electronic structure calculations.In this paper,a new parallelmesh refinementmethod for electronic structure calculations is presented.Some properties of the method are investigated to make itmore efficient andmore convenient for implementation.Several practical issues such as distributed memory parallel computation,less tetrahedra prototypes,and the assignment of the mesh elements carried out independently in each sub-domain will be discussed.The numerical experiments on the periodic system,cluster and nano-tube are presented to demonstrate the effectiveness of the proposed method. 展开更多
关键词 Tetrahedralmesh adaptivemesh refinement parallel algorithms electronic structure calculations
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