A knowledge graph(KG)is a knowledge base that integrates and represents data based on a graph-structured data model or topology.Geoscientists have made efforts to construct geosciencerelated KGs to overcome semantic h...A knowledge graph(KG)is a knowledge base that integrates and represents data based on a graph-structured data model or topology.Geoscientists have made efforts to construct geosciencerelated KGs to overcome semantic heterogeneity and facilitate knowledge representation,data integration,and text analysis.However,there is currently no comprehensive paleontology KG or data-driven discovery based on it.In this study,we constructed a two-layer model to represent the ordinal hierarchical structure of the paleontology KG following a top-down construction process.An ontology containing 19365 concepts has been defined up to 2023.On this basis,we derived the synonymy list based on the paleontology KG and designed corresponding online functions in the OneStratigraphy database to showcase the use of the KG in paleontological research.展开更多
Paleobiogeography investigates geographical distributions of fossil organisms and controlling factors that affect their distributions in geological history,to reveal the macro-evolution and coordinated development of ...Paleobiogeography investigates geographical distributions of fossil organisms and controlling factors that affect their distributions in geological history,to reveal the macro-evolution and coordinated development of life and the environment.It is a crucial window for understanding the biosphere and the geographical environment.After two centuries of development,paleobiogeographic studies have led to the accumulation of significant amounts of knowledge and data;however,the voluminous outputs present the characteristics of an“isolated island”with a scattered,limited number of authoritative definitions of terminologies and semantic heterogeneity among them.This makes data queries cumbersome,the rate of data reuse low,and data sharing more difficult.A knowledge graph(KG)has the advantage of expressing concepts and their semantic relations,which is an important tool for achieving data organization and fusion,and data mining;further,it is also a key technology for realizing the unrestricted sharing of paleobiogeographic information.Through our efforts over the past two years,a paleobiogeographic KG was developed based on the established construction procedure of the KG,which contains 273 concepts,172 properties,and 47 rules.Meanwhile,the completion of this KG and the construction of a paleobiogeographic platform for display and analysis are now being carried out.展开更多
The Carboniferous-Permian strata in the North China Block(NCB) contain abundant fossils, coals and natural gases.Establishing a high-resolution timescale for the Carboniferous and Permian in the NCB is essential to un...The Carboniferous-Permian strata in the North China Block(NCB) contain abundant fossils, coals and natural gases.Establishing a high-resolution timescale for the Carboniferous and Permian in the NCB is essential to understand the geologic events and explore the spatial and temporal distributions of the natural resources. The upper Carboniferous and the basal part of Permian are relatively well correlated because they yield marine conodont and fusuline fossils. However, the Permian terrestrial strata mostly rely on poorly constrained palynostratigraphy and phytostratigraphy and are short of the precise geochronologic constraints on the correlation with the marine strata. This study provides a critical review on the state-of-the-art of the latest Carboniferous and Permian chronostratigraphic and biostratigraphic frameworks and stratigraphic correlation in the NCB. The Penchi Formation ranges from lower Bashkirian to lower Gzhelian;the Taiyuan Formation is assigned to the upper Gzhelian to lower Asselian;the Shansi and Lower Shihhotse formations are from middle Asselian to lower Sakmarian;the Upper Shihhotse Formation is assigned to upper Artinskian to lower Kungurian, and the Sunjiagou Formation was assigned to Lopingian, respectively. A long hiatus up to ~20 Myr between the Upper Shihhotse and Sunjiagou formations, mainly marked by a large-scale erosional surface at the base of a coarse conglomeratic sandstone unit and/or multiple paleosol layers as well as significant differences of floras between these two lithostratigraphic units, is present probably due to tectonic uplift in association with the closure of the Paleo Asian Ocean(PAO) during the Cisuralian and Guadalupian. The possible amplitude of sea-level changes from Carboniferous to Permian on the NCB is estimated from 0 to 40 m.The floral succession, depositional records and organic carbon isotope profiles suggest that the latest Carboniferous and earliest Permian was a favorable period for coal accumulation under an ever-wet and warm climate, followed by a prominent shift to dry climate from early-middle Cisuralian. This climatic shift during the Permian was mainly resulted from northward migration of the Pangea and the closure of the PAO, which is comparable with the Carboniferous and Permian trends in central Europe.展开更多
基金supported by the National Natural Science Foundation of China(Nos.41725007,42250104,41830323,42002015,and 42302001)the Fundamental Research Funds for the Central Universities(Nos.020614380168,JZ2023HGQA0144 and JZ2023HGTA0175)。
文摘A knowledge graph(KG)is a knowledge base that integrates and represents data based on a graph-structured data model or topology.Geoscientists have made efforts to construct geosciencerelated KGs to overcome semantic heterogeneity and facilitate knowledge representation,data integration,and text analysis.However,there is currently no comprehensive paleontology KG or data-driven discovery based on it.In this study,we constructed a two-layer model to represent the ordinal hierarchical structure of the paleontology KG following a top-down construction process.An ontology containing 19365 concepts has been defined up to 2023.On this basis,we derived the synonymy list based on the paleontology KG and designed corresponding online functions in the OneStratigraphy database to showcase the use of the KG in paleontological research.
基金supported by the National Natural Science Foundation of China(Nos.42172174,41802017,42250104)the National Key R&D Program of China(No.2018YFE0204201)the Fundamental Research Funds for the Central Universities(No.0206-14380168)。
文摘Paleobiogeography investigates geographical distributions of fossil organisms and controlling factors that affect their distributions in geological history,to reveal the macro-evolution and coordinated development of life and the environment.It is a crucial window for understanding the biosphere and the geographical environment.After two centuries of development,paleobiogeographic studies have led to the accumulation of significant amounts of knowledge and data;however,the voluminous outputs present the characteristics of an“isolated island”with a scattered,limited number of authoritative definitions of terminologies and semantic heterogeneity among them.This makes data queries cumbersome,the rate of data reuse low,and data sharing more difficult.A knowledge graph(KG)has the advantage of expressing concepts and their semantic relations,which is an important tool for achieving data organization and fusion,and data mining;further,it is also a key technology for realizing the unrestricted sharing of paleobiogeographic information.Through our efforts over the past two years,a paleobiogeographic KG was developed based on the established construction procedure of the KG,which contains 273 concepts,172 properties,and 47 rules.Meanwhile,the completion of this KG and the construction of a paleobiogeographic platform for display and analysis are now being carried out.
基金supported by the Strategic Priority Research Program of the Chinese Academy of Sciences (Grant No. XDB26000000)the National Natural Science Foundation of China (Grant No. 91955201)the Science Research and Technology Development of RIPED (Grant No. RIPED-2019-JS-984)。
文摘The Carboniferous-Permian strata in the North China Block(NCB) contain abundant fossils, coals and natural gases.Establishing a high-resolution timescale for the Carboniferous and Permian in the NCB is essential to understand the geologic events and explore the spatial and temporal distributions of the natural resources. The upper Carboniferous and the basal part of Permian are relatively well correlated because they yield marine conodont and fusuline fossils. However, the Permian terrestrial strata mostly rely on poorly constrained palynostratigraphy and phytostratigraphy and are short of the precise geochronologic constraints on the correlation with the marine strata. This study provides a critical review on the state-of-the-art of the latest Carboniferous and Permian chronostratigraphic and biostratigraphic frameworks and stratigraphic correlation in the NCB. The Penchi Formation ranges from lower Bashkirian to lower Gzhelian;the Taiyuan Formation is assigned to the upper Gzhelian to lower Asselian;the Shansi and Lower Shihhotse formations are from middle Asselian to lower Sakmarian;the Upper Shihhotse Formation is assigned to upper Artinskian to lower Kungurian, and the Sunjiagou Formation was assigned to Lopingian, respectively. A long hiatus up to ~20 Myr between the Upper Shihhotse and Sunjiagou formations, mainly marked by a large-scale erosional surface at the base of a coarse conglomeratic sandstone unit and/or multiple paleosol layers as well as significant differences of floras between these two lithostratigraphic units, is present probably due to tectonic uplift in association with the closure of the Paleo Asian Ocean(PAO) during the Cisuralian and Guadalupian. The possible amplitude of sea-level changes from Carboniferous to Permian on the NCB is estimated from 0 to 40 m.The floral succession, depositional records and organic carbon isotope profiles suggest that the latest Carboniferous and earliest Permian was a favorable period for coal accumulation under an ever-wet and warm climate, followed by a prominent shift to dry climate from early-middle Cisuralian. This climatic shift during the Permian was mainly resulted from northward migration of the Pangea and the closure of the PAO, which is comparable with the Carboniferous and Permian trends in central Europe.