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The RppC-AvrRppC NLR-effector interaction mediates the resistance to southern corn rust in maize 被引量:8
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作者 ce deng April Leonard +34 位作者 James Cahill Meng Lv Yurong Li Shawn Thatcher Xueying Li Xiaodi Zhao Wenjie Du Zheng Li Huimin Li Victor Llaca Kevin Fengler Lisa Marshall Charlotte Harris Girma Tabor Zhimin Li Zhiqiang Tian Qinghua Yang Yanhui Chen Jihua Tang Xintao Wang Junjie Hao Jianbing Yan Zhibing Lai Xiaohong Fei Weibin Song Jinsheng Lai Xuecai Zhang Guoping Shu Yibo Wang Yuxiao Chang Weiling Zhu Wei Xiong Juan Sun Bailin Li Junqiang Ding 《Molecular Plant》 SCIE CAS CSCD 2022年第5期904-912,共9页
Southern corn rust(SCR),caused by the fungal pathogen Puccinia polysora,is a major threat to maize pro-duction worldwide.Efficient breeding and deployment of resistant hybrids are key to achieving durable control of S... Southern corn rust(SCR),caused by the fungal pathogen Puccinia polysora,is a major threat to maize pro-duction worldwide.Efficient breeding and deployment of resistant hybrids are key to achieving durable control of SCR.Here,we report the molecular cloning and characterization of RppC,which encodes an NLR-type immune receptor and is responsible for a major SCR resistance quantitative trait locus.Further-more,we identified the corresponding avirulence effector,AvrRppC,which is secreted by P.polysora and triggers RppC-mediated resistance.Allelic variation of AvrRppC directly determines the effectiveness of RppC-mediated resistance,indicating that monitoring of AvrRppC variants in the field can guide the rational deployment of RppC-containing hybrids in maize production.Currently,RppC is the most frequently deployed SCR resistance gene in China,and a better understanding of its mode of action is crit-ical for extending its durability. 展开更多
关键词 MAIZE Zea mays RppC AvrRpp Csouthern corn rust SCR
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High-quality genome assembly of Huazhan and Tianfeng,the parents of an elite rice hybrid Tian-you-hua-zhan 被引量:4
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作者 Hui Zhang Yuexing Wang +8 位作者 ce deng Sheng Zhao Peng Zhang Jie Feng Wei Huang Shujing Kang Qian Qian Guosheng Xiong Yuxiao Chang 《Science China(Life Sciences)》 SCIE CAS CSCD 2022年第2期398-411,共14页
High-quality rice reference genomes have accelerated the comprehensive identification of genome-wide variations and research on functional genomics and breeding.Tian-you-hua-zhan has been a leading hybrid in China ove... High-quality rice reference genomes have accelerated the comprehensive identification of genome-wide variations and research on functional genomics and breeding.Tian-you-hua-zhan has been a leading hybrid in China over the past decade.Here,de novo genome assembly strategy optimization for the rice indica lines Huazhan(HZ)and Tianfeng(TF),including sequencing platforms,assembly pipelines and sequence depth,was carried out.The PacBio and Nanopore platforms for long-read se-quencing were utilized,with the Canu,wtdbg2,SMARTdenovo,Flye,Canu-wtdbg2,Canu-SMARTdenovo and Canu-Flye assemblers.The combination of PacBio and Canu was optimal,considering the contig N50 length,contig number,assembled genome size and polishing process.The assembled contigs were scaffolded with Hi-C data,resulting in two“golden quality”rice reference genomes,and evaluated using the scaffold N50,BUSCO,and LTR assembly index.Furthermore,42,625 and 41,815 non-transposable element genes were annotated for HZ and TF,respectively.Based on our assembly of HZ and TF,as well as Zhenshan97,Minghui63,Shuhui498 and 9311,comprehensive variations were identified using Nipponbare as a reference.The de novo assembly strategy for rice we optimized and the“golden quality”rice genomes we produced for HZ and TF will benefit rice genomics and breeding research,especially with respect to uncovering the genomic basis of the elite traits of HZ and TF. 展开更多
关键词 de novo genome assembly HIGH-QUALITY PacBio NANOPORE variation RICE
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Structural whiteness of the multi-component glaze dependence on amorphous photonic crystals 被引量:2
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作者 Hongquan ZHAN Chuanqi WU +3 位作者 ce deng Xiaohong LI Zhipeng XIE Changan WANG 《Frontiers of Materials Science》 SCIE CSCD 2019年第2期206-215,共10页
A kind of enhancing mechanism of structural whiteness dependence on amorphous photonic crystal (APC) structure is introduced in this paper. In the glaze system composed of albite, kaolin, talc, calcite, quartz, titani... A kind of enhancing mechanism of structural whiteness dependence on amorphous photonic crystal (APC) structure is introduced in this paper. In the glaze system composed of albite, kaolin, talc, calcite, quartz, titanium dioxide and zinc oxide, the APC structure will be produced by using quartz as a variable to induce the phase separation. Under different polarities between Ti, Zn etc. and Siion, the separated spheres with the core-shell structure can be obtained and then make up opal-like APCs in the glaze layer. In addition to inner and outer layers of core-shell spheres, the calculated results of refractive indices clearly show the great difference between the particles and the matrix. As a result of different refractive indices, the multiple scatting of visible light plays a key rote in the structural whiteness. However, due to the decrease of the cationic content, APCs with the reverse opal structure would be formed in the interface between glaze and body. Ultimately, the glaze appearance reveals extremely high structural whiteness due to the special APC structure. 展开更多
关键词 STRUCTURAL WHITENESS AMORPHOUS photonic crystal CORE-SHELL structure
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