Plantations of native shrub species restore soil microbial diversity in the Horqin Sandy Land, northeastern China

Caragana microphylla Lam., a leguminous shrub species, plays an important role in revegetation in the degraded ecosystems of the Horqin Sandy Land, Northeastern China. Large areas planted with this shrub have been artificially established as sand binders for soil protection, which might change the composition of soil bacterial communities with the development of sand dune stabilization. In this paper, we investigated the diversity and composition of native soil bacterial communities in the C. microphylla plantation for sand fixation using polymerase chain reaction with denaturing gradient gel electrophoresis（PCR-DGGE） to understand the influence of this plantation on sandy soil ecosystem development. We collected soil samples from plantations with an age sequence of 0, 9, 16, and 26 years, as well as from the natural community, to identify the differences among soil bacterial communities. The result showed that bacterial abundance and community composition in the sandy land were affected by the age of the C. microphylla plantation. Moreover, bacterial diversity decreased with increasing plantation age, and the composition of the bacterial community in the 26-year plantation was similar to that in the natural community. Phylogenetic analysis of bands excised from the DGGE gels showed that members of alpha Proteobacterium, gamma Proteobacterium, Gemmatimonadetes and Chloroflexi were dominant in the sandy land. The stabilization of moving sand dune and development of sand-fixed plantation resulted in an increase of soil fertility, which could drive the structural evolvement of soil bacterial community, and it needs over 20 years for the soil bacterial community to form a stable structure, similar to the case for the natural vegetation.

Fungal diversity in major oil-shale mines in China

As an insufficiently utilized energy resource,oil shale is conducive to the formation of characteristic microbial communities due to its special geological origins.However,little is known about fungal diversity in oil shale.Polymerase chain reaction cloning was used to construct the fungal ribosomal deoxyribonucleic acid internal transcribed spacer（r DNA ITS）clone libraries of Huadian Mine in Jilin Province,Maoming Mine in Guangdong Province,and Fushun Mine in Liaoning Province.Pure culture and molecular identification were applied for the isolation of cultivable fungi in fresh oil shale of each mine.Results of clone libraries indicated that each mine had over 50% Ascomycota（58.4%–98.9%）and 1.1%–13.5%unidentified fungi.Fushun Mine and Huadian Mine had 5.9% and 28.1% Basidiomycota,respectively.Huadian Mine showed the highest fungal diversity,followed by Fushun Mine and Maoming Mine.Jaccard indexes showed that the similarities between any two of three fungal communities at the genus level were very low,indicating that fungi in each mine developed independently during the long geological adaptation and formed a community composition fitting the environment.In the fresh oil-shale samples of the three mines,cultivable fungal phyla were consistent with the results of clone libraries.Fifteen genera and several unidentified fungi were identified as Ascomycota and Basidiomycota using pure culture.Penicillium was the only genus found in all three mines.These findings contributed to gaining a clear understanding of current fungal resources in major oil-shale mines in China and provided useful information for relevant studies on isolation of indigenous fungi carrying functional genes from oil shale.