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Properties and organic activation of ocean clay in the East Pacific
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作者 Peiping Zhang Xiaoguo Chi +3 位作者 chunyan tian Baojun Wang Huahua Lü Xuefa Shi 《Global Geology》 2006年第1期19-29,共11页
In order to make use of ocean clay reasonably and excavate its potential applications the properties of ocean clay in Chinese investigating area of the East Pacific have been tested with the chemical analysis, XRFS, I... In order to make use of ocean clay reasonably and excavate its potential applications the properties of ocean clay in Chinese investigating area of the East Pacific have been tested with the chemical analysis, XRFS, ICP/MAS, granulometry and SSA, etc. The results show that the clay sediments of this area are rich in clay minerals, fine granularity, bigger SSA, bigger water absorbability and lower ion changing ability etc. To improve the adaptability of ocean clay and macromolecule materials, using the dry milling method with silane, aluminate, stearic acid coupling agents etc the properties of ocean clay are improved. The effect has been evaluated by testing the water absorbing of the modified ocean clay and their dispersing in paraffin liquid. The result is that KH550 is better than any other active reagents, and the best activation technics is that 1.5% (volume) of KH550 quantity, 20min of milling time. The DTA, XRD, SEM and IR analyses and SSA testing show that the organic activation can not change the mineral structure but can densify the structure of clay, and activation mechanism is chemical covered mainly and chemical combined secondly. 展开更多
关键词 ocean clay organic activation structure PROPERTY
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基于集成的共表达网络分析方法研究3种癌症的肿瘤相关模块 被引量:1
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作者 王梦男 韩明飞 +2 位作者 刘炳辉 田春艳 朱云平 《生物工程学报》 CAS CSCD 北大核心 2021年第11期4111-4123,共13页
在肿瘤/癌旁基因表达数据中,差异表达(DE,differentialexpression)代表各种生物条件下基因表达水平的变化,而差异共表达(DC,differential co-expression)代表基因对之间相关系数的变化。单独的DC和DE研究方法已经被广泛应用于人类疾病... 在肿瘤/癌旁基因表达数据中,差异表达(DE,differentialexpression)代表各种生物条件下基因表达水平的变化,而差异共表达(DC,differential co-expression)代表基因对之间相关系数的变化。单独的DC和DE研究方法已经被广泛应用于人类疾病研究中。但是,目前仍然缺乏有效整合DC和DE的分析方法。文中提出一个新颖的分析框架DC&DEmodule,该框架可以基于共表达模块整合DC和DE的特征,并同时整合多个肿瘤/癌旁表达谱的信息,用以识别与疾病相关的基因共表达模块,包括激活模块(肿瘤样本中上调且共表达增强)和失能模块(肿瘤样本中下调且失去共表达)。将该框架用于分析肝癌、胃癌和结直肠癌各两组微阵列数据,分别得到肝癌、胃癌和结直肠癌的2、5和2个激活模块以及5、5和1个失能模块。富集分析表明与同类方法相比,文中的方法在检测已知的肿瘤相关通路和发现新通路方面均具有更高的灵敏度。然后,进一步从这3种癌症的激活模块中鉴定出17、69和11个模块关键基因,其中包含53个已报道的预后生物标志物以及3个分别与3种癌症存活率显著相关的新预后标志物。基于关键基因训练了3种癌症的随机森林模型,用于区分TCGA(The Cancer Genome Atlas)和GEO(Gene Expression Omnibus)数据库中的肿瘤和癌旁样本,结果显示其分类的平均准确性达到了93%。三种癌症的比较为不同癌症的共有和组织特异性机制提供了新的见解。一系列评估表明,DC&DEmodule框架能够整合公共数据库中快速积累的表达谱,发现更多疾病中功能失调的生物过程。 展开更多
关键词 癌症 差异共表达 差异表达 共表达模块 基于集成的分析框架
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A Yeast BiFC-seq Method for Genome-wide Interactome Mapping 被引量:1
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作者 Limin Shang Yuehui Zhang +9 位作者 Yuchen Liu Chaozhi Jin Yanzhi Yuan chunyan tian Ming Ni Xiaochen Bo Li Zhang Dong Li Fuchu He Jian Wang 《Genomics, Proteomics & Bioinformatics》 SCIE CAS CSCD 2022年第4期795-807,共13页
Genome-wide physical protein±protein interaction(PPI)mapping remains a major challenge for current technologies.Here,we reported a high-efficiency BiFC-seq method,yeastenhanced green fluorescent protein-based bim... Genome-wide physical protein±protein interaction(PPI)mapping remains a major challenge for current technologies.Here,we reported a high-efficiency BiFC-seq method,yeastenhanced green fluorescent protein-based bimolecular fluorescence complementation(y EGFPBiFC)coupled with next-generation DNA sequencing,for interactome mapping.We first applied y EGFP-BiFC method to systematically investigate an intraviral network of the Ebola virus.Two-thirds(9/14)of known interactions of EBOV were recaptured,and five novel interactions were discovered.Next,we used the BiFC-seq method to map the interactome of the tumor protein p53.We identified 97 interactors of p53,more than three-quarters of which were novel.Furthermore,in a more complex background,we screened potential interactors by pooling two BiFC libraries together and revealed a network of 229 interactions among 205 proteins.These results show that BiFC-seq is a highly sensitive,rapid,and economical method for genome-wide interactome mapping. 展开更多
关键词 Bimolecular fluorescence complementation Protein–protein interaction HIGH-THROUGHPUT Next-generation sequencing
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Temporal changes in the characteristics of algae in Dianchi Lake,Yunnan Province,China
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作者 Ruixia SHEN chunyan tian +4 位作者 Zhidan LIU Yuanhui ZHANG Baoming LI Haifeng LU Na DUAN 《Frontiers of Agricultural Science and Engineering》 2015年第3期266-275,共10页
Algal blooms have become a worldwide environmental concern due to water eutrophication.Dianchi Lake in Yunnan Province,China is suffering from severe eutrophication and is listed in the Three Important Lakes Restorati... Algal blooms have become a worldwide environmental concern due to water eutrophication.Dianchi Lake in Yunnan Province,China is suffering from severe eutrophication and is listed in the Three Important Lakes Restoration Act of China.Hydrothermal liquefaction allows a promising and direct conversion of algal biomass into biocrude oil.In this study,algal samples were collected from Dianchi Lake after a separation procedure including dissolved air flotation with polyaluminum chloride and centrifugation during four months,April,June,August and October.The algal biochemical components varied over the period;lipids from 0.7%to 2.1%ash-free dry weight(afdw),protein from 20.9%to 33.4%afdw and ash from 36.6%to 45.2%dry weight.The algae in June had the highest lipid and protein concentrations,leading to a maximum biocrude oil yield of 24.3%afdw.Biodiversity analysis using pyrosequencing revealed different distributions of microbial communities,specifically Microcystis in April(89.0%),June(63.7%)and August(84.0%),and Synechococcus in April(2.2%),June(12.0%)and August(1.0%).This study demonstrated remarkable temporal changes in the biochemical composition and biodiversity of algae harvested from Dianchi Lake and changes in biocrude oil production potential. 展开更多
关键词 algal blooms temporal change biochemical property BIODIVERSITY hydrothermal liquefaction
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