The tumor heterogeneity results in different clinical characteristics of tumor patients,so precise therapy is a popular treatment strategy clinically.Microsatellite instability(MSI)is found in 10%-15%of colorectal can...The tumor heterogeneity results in different clinical characteristics of tumor patients,so precise therapy is a popular treatment strategy clinically.Microsatellite instability(MSI)is found in 10%-15%of colorectal cancer(CRC)patients and exhibits different clinical outcomes than microsatellite stable(MSS)patients.Surprisingly,MSI patients have a better prognosis than patients with stable microsatellites.Msl patients exhibit clinical features that are not responsive to chemotherapy,however,Msl patients showed excellent responses to immunotherapy.'Although the subtype classification of MSI is beneficial to the clinical treatment of CRC patients,the mechanism of MSl remains unclear.展开更多
Metabolic reprogramming is a hallmark of cancer,including lung cancer.However,the exact underlying mechanism and therapeutic potential are largely unknown.Here we report that protein arginine methyltransferase 6(PRMT6...Metabolic reprogramming is a hallmark of cancer,including lung cancer.However,the exact underlying mechanism and therapeutic potential are largely unknown.Here we report that protein arginine methyltransferase 6(PRMT6)is highly expressed in lung cancer and is required for cell metabolism,tumorigenicity,and cisplatin response of lung cancer.PRMT6 regulated the oxidative pentose phosphate pathway(PPP)flux and glycolysis pathway in human lung cancer by increasing the activity of 6-phosphogluconate dehydrogenase(6PGD)and a-enolase(ENO1).Furthermore,PRMT6 methylated R324 of 6PGD to enhancing its activity;while methylation at R9 and R372 of ENO1 promotes formation of active ENO1 dimers and 2-phosphoglycerate(2-PG)binding to ENO1,respectively.Lastly,targeting PRMT6 blocked the oxidative PPP flux,glycolysis pathway,and tumor growth,as well as enhanced the antitumor effects of cisplatin in lung cancer.Together,this study demonstrates that PRMT6 acts as a posttranslational modification(PTM)regulator of glucose metabolism,which leads to the pathogenesis of lung cancer.It was proven that the PRMT6-6PGD/ENO1 regulatory axis is an important determinant of carcinogenesis and may become a promising cancer therapeutic strategy.展开更多
Numerical instability may occur when simulating high Reynolds number flows by the lattice Boltzmann method(LBM).The multiple-relaxation-time(MRT)model of the LBM can improve the accuracy and stability,but is still sub...Numerical instability may occur when simulating high Reynolds number flows by the lattice Boltzmann method(LBM).The multiple-relaxation-time(MRT)model of the LBM can improve the accuracy and stability,but is still subject to numerical instability when simulating flows with large single-grid Reynolds number(Reynolds number/grid number).The viscosity counteracting approach proposed recently is a method of enhancing the stability of the LBM.However,its effectiveness was only verified in the single-relaxation-time model of the LBM(SRT-LBM).This paper aims to propose the viscosity counteracting approach for the multiple-relaxationtime model(MRT-LBM)and analyze its numerical characteristics.The verification is conducted by simulating some benchmark cases:the two-dimensional(2D)lid-driven cavity flow,Poiseuille flow,Taylor-Green vortex flow and Couette flow,and threedimensional(3D)rectangular jet.Qualitative and Quantitative comparisons show that the viscosity counteracting approach for the MRT-LBMhas better accuracy and stability than that for the SRT-LBM.展开更多
This paper aims to study the numerical features of a coupling scheme between the immersed boundary(IB)method and the lattice Boltzmann BGK(LBGK)model by four typical test problems:the relaxation of a circular membrane...This paper aims to study the numerical features of a coupling scheme between the immersed boundary(IB)method and the lattice Boltzmann BGK(LBGK)model by four typical test problems:the relaxation of a circular membrane,the shearing flow induced by a moving fiber in the middle of a channel,the shearing flow near a non-slip rigid wall,and the circular Couette flow between two inversely rotating cylinders.The accuracy and robustness of the IB-LBGK coupling scheme,the performances of different discrete Dirac delta functions,the effect of iteration on the coupling scheme,the importance of the external forcing term treatment,the sensitivity of the coupling scheme to flow and boundary parameters,the velocity slip near non-slip rigid wall,and the origination of numerical instabilities are investigated in detail via the four test cases.It is found that the iteration in the coupling cycle can effectively improve stability,the introduction of a second-order forcing term in LBGK model is crucial,the discrete fiber segment length and the orientation of the fiber boundary obviously affect accuracy and stability,and the emergence of both temporal and spatial fluctuations of boundary parameters seems to be the indication of numerical instability.These elaborate results shed light on the nature of the coupling scheme and may benefit those who wish to use or improve the method.展开更多
基金supported by grants from National Nature Science Foundation of China(No.81973356,81902826 and 82273963)Natural Science Foundation of Tianjin(No.21JCZDJC00060 and 21JCYBJC00180)the Fundamental Research Funds for the Central Universities of Nankai University(No.ZB22010404,3206054,91923101,63213082,and 92122017).
文摘The tumor heterogeneity results in different clinical characteristics of tumor patients,so precise therapy is a popular treatment strategy clinically.Microsatellite instability(MSI)is found in 10%-15%of colorectal cancer(CRC)patients and exhibits different clinical outcomes than microsatellite stable(MSS)patients.Surprisingly,MSI patients have a better prognosis than patients with stable microsatellites.Msl patients exhibit clinical features that are not responsive to chemotherapy,however,Msl patients showed excellent responses to immunotherapy.'Although the subtype classification of MSI is beneficial to the clinical treatment of CRC patients,the mechanism of MSl remains unclear.
基金supported by grants from the Natural Science Foundation of Tianjin(21JCZDJC00060,China)the National Nature Science Foundation of China(81973356,91957120,81902826,and 81672781)+4 种基金the Fundamental Research Funds for the Central Universities of Nankai University(3206054,91923101,63213082 and 92122017,China)the State Key Laboratory of Drug Research(SIMM2105KF-08,China)the National Key R&D Program of China(No.2018YFC2002000)the Innovative S&T Projects for Young Researchers of Tianjin Academy of Agricultural Science(grant No.201918,China)the Natural Science Foundation of Tianjin(19JCYBJC29600 and 21JCYBJC00180,China)。
文摘Metabolic reprogramming is a hallmark of cancer,including lung cancer.However,the exact underlying mechanism and therapeutic potential are largely unknown.Here we report that protein arginine methyltransferase 6(PRMT6)is highly expressed in lung cancer and is required for cell metabolism,tumorigenicity,and cisplatin response of lung cancer.PRMT6 regulated the oxidative pentose phosphate pathway(PPP)flux and glycolysis pathway in human lung cancer by increasing the activity of 6-phosphogluconate dehydrogenase(6PGD)and a-enolase(ENO1).Furthermore,PRMT6 methylated R324 of 6PGD to enhancing its activity;while methylation at R9 and R372 of ENO1 promotes formation of active ENO1 dimers and 2-phosphoglycerate(2-PG)binding to ENO1,respectively.Lastly,targeting PRMT6 blocked the oxidative PPP flux,glycolysis pathway,and tumor growth,as well as enhanced the antitumor effects of cisplatin in lung cancer.Together,this study demonstrates that PRMT6 acts as a posttranslational modification(PTM)regulator of glucose metabolism,which leads to the pathogenesis of lung cancer.It was proven that the PRMT6-6PGD/ENO1 regulatory axis is an important determinant of carcinogenesis and may become a promising cancer therapeutic strategy.
基金supported by the National Natural Science Foundation of China(NSFC,Grant Numbers 10572106,10872153 and 11172219)the Specialized Research Fund for the Doctoral Program of Higher Education of China(Grant No.20130141110013).
文摘Numerical instability may occur when simulating high Reynolds number flows by the lattice Boltzmann method(LBM).The multiple-relaxation-time(MRT)model of the LBM can improve the accuracy and stability,but is still subject to numerical instability when simulating flows with large single-grid Reynolds number(Reynolds number/grid number).The viscosity counteracting approach proposed recently is a method of enhancing the stability of the LBM.However,its effectiveness was only verified in the single-relaxation-time model of the LBM(SRT-LBM).This paper aims to propose the viscosity counteracting approach for the multiple-relaxationtime model(MRT-LBM)and analyze its numerical characteristics.The verification is conducted by simulating some benchmark cases:the two-dimensional(2D)lid-driven cavity flow,Poiseuille flow,Taylor-Green vortex flow and Couette flow,and threedimensional(3D)rectangular jet.Qualitative and Quantitative comparisons show that the viscosity counteracting approach for the MRT-LBMhas better accuracy and stability than that for the SRT-LBM.
基金the National Natural Science Foundation of China(NSFC,Grant numbers 10572106,10872153 and 11172219)the Specialized Research Fund for the Doctoral Program of Higher Education of China(Grant No.20130141110013)。
文摘This paper aims to study the numerical features of a coupling scheme between the immersed boundary(IB)method and the lattice Boltzmann BGK(LBGK)model by four typical test problems:the relaxation of a circular membrane,the shearing flow induced by a moving fiber in the middle of a channel,the shearing flow near a non-slip rigid wall,and the circular Couette flow between two inversely rotating cylinders.The accuracy and robustness of the IB-LBGK coupling scheme,the performances of different discrete Dirac delta functions,the effect of iteration on the coupling scheme,the importance of the external forcing term treatment,the sensitivity of the coupling scheme to flow and boundary parameters,the velocity slip near non-slip rigid wall,and the origination of numerical instabilities are investigated in detail via the four test cases.It is found that the iteration in the coupling cycle can effectively improve stability,the introduction of a second-order forcing term in LBGK model is crucial,the discrete fiber segment length and the orientation of the fiber boundary obviously affect accuracy and stability,and the emergence of both temporal and spatial fluctuations of boundary parameters seems to be the indication of numerical instability.These elaborate results shed light on the nature of the coupling scheme and may benefit those who wish to use or improve the method.