Experiments were carried out to study the effects of nitrification inhibitors (NI) on the transformation of soil nitrogen (N) in purple soil and the effects on the N accumulation in different organs of citrus seedling...Experiments were carried out to study the effects of nitrification inhibitors (NI) on the transformation of soil nitrogen (N) in purple soil and the effects on the N accumulation in different organs of citrus seedlings. In incubation and pot experiments, the rate of nitrification inhibitors 2-chloro-6-trichloro-methyl pyridine (Nitrapyrin), 3,4-dimethylpyrazole phosphate (DMPP) and dicyandiamide (DCD) was 2.4%, 1.0% and 5.0% of N rate, respectively. The trend of different nitrification inhibitors on ammonium nitrogen ( NH+4-N ), nitrate nitrogen ( NO-3-N ) content and pH was compared in incubation experiment;and the effect of different NI on the dry matter quality, N uptake of citrus seedling was studied in pot experiment. The results showed that NI could significantly inhibit soil nitrification in the early culture period (p DMPP > En (calculated as nitrogen application rate). Application of NI increased the height and dry matter accumulation, N accumulation of citrus seedling grown in pot experiment. Thus, application of NI would be helpful for improving N use efficiency in purple soil which is one of major soil types for citrus production in China.展开更多
Despite recent progress in crop genomics studies,the genomic changes brought about by modern breeding selection are still poorly understood,thus hampering genomics-assisted breeding,especially in polyploid crops with ...Despite recent progress in crop genomics studies,the genomic changes brought about by modern breeding selection are still poorly understood,thus hampering genomics-assisted breeding,especially in polyploid crops with compound genomes such as common wheat(Triticum aestivum).In this work,we constructed genome resources for the modern elite common wheat variety Aikang 58(AK58).Comparative genomics between AK58 and the landrace cultivar Chinese Spring(CS)shed light on genomic changes that occurred through recent varietal improvement.We also explored subgenome diploidization and divergence in common wheat and developed a homoeologous locus-based genome-wide association study(HGWAS)approach,which was more effective than single homoeolog-based GWAS in unraveling agronomic trait-associated loci.A total of 123 major HGWAs loci were detected using a genetic population derived from AK58 and cs.Elite homoeologous haplotypes(HHs),formed by combinations of subgenomic homoeologs of the associated loci,were found in both parents and progeny,and many could substantially improve wheat yield and related traits.We built a website where users can download genome assembly sequence and annotation data for AK58,perform blast analysis,and run JBrowse.Our work enriches genome resources for wheat,provides new insights into genomic changes during modern wheat improve-.ment,and suggests that efficientmining of elite HHs can make a substantial contribuutionto genomics-assisted breeding in common wheat and other polyploid crops.展开更多
Wheat(Triticum aestivum,BBAADD)is an allohexaploid species that originated from two polyploidization events.The progenitors of the A and D subgenomes have been identified as Triticum urartu and Aegilops tauschii,respe...Wheat(Triticum aestivum,BBAADD)is an allohexaploid species that originated from two polyploidization events.The progenitors of the A and D subgenomes have been identified as Triticum urartu and Aegilops tauschii,respectively.Current research suggests that Aegilops speltoides is the closest but not the direct ancestor of the B subgenome.However,whether Ae.speltoides has contributed genomically to the wheat B subgenome and which chromosome regions are conserved between Ae.speltoides and the B subgenome remain unclear.Here,we assembled a high-quality reference genome for Ae.speltoides,resequenced 53 accessions from seven species(Aegilops bicornis,Aegilops longissima,Aegilops searsii,Aegilops sharonensis,Ae.speltoides,Aegilops mutica[syn.Amblyopyrum muticum],and Triticumdicoccoides)and revealed their genomic contributions to the wheat B subgenome.Our results showed that centromeric regions were particularly conserved between Aegilops and Triticum and revealed 0.17 Gb of conserved blocks between Ae.speltoides and the B subgenome.We classified five groups of conserved and non-conserved genes between Aegilops and Triticum,revealing their biological characteristics,differentiation in gene expression patterns,and collinear relationships between Ae.speltoides and the wheat B subgenome.We also identified gene families that expanded in Ae.speltoides during its evolution and 789 genes specific to Ae.speltoides.These genes can serve as genetic resources for improvement of adaptability to biotic and abiotic stress.The newly constructed reference genome and large-scale resequencing data for Sitopsis species will provide a valuable genomic resource for wheat genetic improvement and genomic studies.展开更多
The precise control of flowering time is important for the regional adaptability and productivity of many crops.Various categories of genes related to flowering have been isolated and characterized functionally in whe...The precise control of flowering time is important for the regional adaptability and productivity of many crops.Various categories of genes related to flowering have been isolated and characterized functionally in wheat(Triticum aestivum) in response to vernalization to adjust flowering initiation. Before vernalization, the inhibitory histone modification H3K27me3 is enriched in the promoter and the first intron of the vernalization gene VRN1.展开更多
Bulked segregant analysis(BSA)is an efficient and low-cost strategy that is widely used to identify causal genes in segregating populations.BSA-based methods,such as BSA sequencing(Wenger et al.,2010),bulked segregant...Bulked segregant analysis(BSA)is an efficient and low-cost strategy that is widely used to identify causal genes in segregating populations.BSA-based methods,such as BSA sequencing(Wenger et al.,2010),bulked segregant RNA sequencing(BSR-seq)(del Viso et al.,2012),and MutMap(Abe et al.,2012),are powerful tools that can be used for rapidly discovering genetic markers and gene mapping.Although BSA is increasingly being used in wheat(Triticum aestivum)gene mapping efforts,few user-friendly BSA tools have been developed for researchers lacking a strong bioinformatics background.Here,we developed the web-based BSA platform WheatGmap(https://www.wheatgmap.org),which integrates multiple BSA mapping models and large amounts of public data to accelerate gene cloning and functional research and facilitate resource sharing.展开更多
Ion-exchange polymer and modified carbonization bacterial cellulose(CBC)electrodes were fabricated using varying amounts of cation-exchange polymers(glutaric acid(GA)and sulfosuccinic acid(SSA))and assembled within an...Ion-exchange polymer and modified carbonization bacterial cellulose(CBC)electrodes were fabricated using varying amounts of cation-exchange polymers(glutaric acid(GA)and sulfosuccinic acid(SSA))and assembled within an asymmetric capacitive deionization unit(p-CDI).The performance of selective NO2-electro-adsorption was studied.The AC/CBCSSA group showed a better salt adsorption capacity(14.56 mg/g)and nitrite removal efficiency(71.01%)than the AC/CBC-GA(10.72 mg/g,47.83%)and AC/AC(4.81 mg/g,12.74%)groups.It was confirmed that the CBC-SSA/GA electrodes enhanced nitrite selectivity and increased the adsorption capacity,and the total amounts of adsorbed anions increased when the applied voltage was increased from 0.8 to 1.2 V,while the molar fraction of nitrate decreased.The competitive and preferential adsorption of anions was further investigated using different binary solutions of anions and occurred in the following sequence:NO2->SO42->NO3->F-≈Cl-.Furthermore,the p-CDI units were applied to remove nitrite in real wastewater samples,and the results showed that they had excellent reusability and application for use in dyeing wastewater treatment.展开更多
Nitrogenization is an effective method for improving the capacitive deionization(CDI)performance of porous carbon materials.In particular,polymer organic frameworks with heteroatom doping,containing an ordered pore st...Nitrogenization is an effective method for improving the capacitive deionization(CDI)performance of porous carbon materials.In particular,polymer organic frameworks with heteroatom doping,containing an ordered pore structure and excellent electrochemical stability,are ideal precursors for carbon materials for high-performance CDI.In this study,a nitrogen-enriched micro-mesoporous carbon(NMC)electrode was fabricated by carbonizing a Schiff base network-1 at 500,600,and 700℃.Scanning electron microscopy,Fourier transform infrared spectroscopy,X-ray diffraction,N_(2) adsorption-desorption,the contact angle of water,cyclic voltammetry,and electrochemical impedance spectroscopy were used to characterize the morphological structure,wettability,Brunauer–Emmett–Teller surface areas,and electrochemical performance of the NMCs.The results showed that the NMC carbonized at 600℃ achieved the best specific capacitance(152.33 F/g),as well as a high electrosorption capacity(25.53 mg/g)because of its chemical composition(15.57%N)and surface area(312 m^(2)/g).These findings prove that NMC is viable as an electrode material for desalination by high-performance CDI applications.展开更多
文摘Experiments were carried out to study the effects of nitrification inhibitors (NI) on the transformation of soil nitrogen (N) in purple soil and the effects on the N accumulation in different organs of citrus seedlings. In incubation and pot experiments, the rate of nitrification inhibitors 2-chloro-6-trichloro-methyl pyridine (Nitrapyrin), 3,4-dimethylpyrazole phosphate (DMPP) and dicyandiamide (DCD) was 2.4%, 1.0% and 5.0% of N rate, respectively. The trend of different nitrification inhibitors on ammonium nitrogen ( NH+4-N ), nitrate nitrogen ( NO-3-N ) content and pH was compared in incubation experiment;and the effect of different NI on the dry matter quality, N uptake of citrus seedling was studied in pot experiment. The results showed that NI could significantly inhibit soil nitrification in the early culture period (p DMPP > En (calculated as nitrogen application rate). Application of NI increased the height and dry matter accumulation, N accumulation of citrus seedling grown in pot experiment. Thus, application of NI would be helpful for improving N use efficiency in purple soil which is one of major soil types for citrus production in China.
基金the Collaborative Innovation Center for Henan Grain Crops,the Ministry of Science and Technology of the People's Republic of China(2021YFF1000200)the National Natural Science Foundation of China(Major Program,31991213)+4 种基金the Central Publicinterest Scientific Institution Basal Research Fund(Y2021YJ01)the Major Public Welfare Projects of Henan Province(201300110800)the Key Research and Development Program of China(2016YFD0100102)the CAAS Agricultural Science and Technology Innovation Program(CAASZDRW202002)the seed innovation program of the Ministry of Agriculture and Rural Affairs of China,and the Henan Provincial R&D Projects of Interregional Cooperation for Local Scientific and Technological Development Guided by the Central Government(YDZX20214100004191).
文摘Despite recent progress in crop genomics studies,the genomic changes brought about by modern breeding selection are still poorly understood,thus hampering genomics-assisted breeding,especially in polyploid crops with compound genomes such as common wheat(Triticum aestivum).In this work,we constructed genome resources for the modern elite common wheat variety Aikang 58(AK58).Comparative genomics between AK58 and the landrace cultivar Chinese Spring(CS)shed light on genomic changes that occurred through recent varietal improvement.We also explored subgenome diploidization and divergence in common wheat and developed a homoeologous locus-based genome-wide association study(HGWAS)approach,which was more effective than single homoeolog-based GWAS in unraveling agronomic trait-associated loci.A total of 123 major HGWAs loci were detected using a genetic population derived from AK58 and cs.Elite homoeologous haplotypes(HHs),formed by combinations of subgenomic homoeologs of the associated loci,were found in both parents and progeny,and many could substantially improve wheat yield and related traits.We built a website where users can download genome assembly sequence and annotation data for AK58,perform blast analysis,and run JBrowse.Our work enriches genome resources for wheat,provides new insights into genomic changes during modern wheat improve-.ment,and suggests that efficientmining of elite HHs can make a substantial contribuutionto genomics-assisted breeding in common wheat and other polyploid crops.
基金supported by the National Natural Science Foundation of China(grant no.31991213)the Talent Program and Agricultural Science and the Technology Innovation Program of CAAS,the China Postdoctoral Science Foundation(grant no.2022M713430)the Central Public-interest Scientific Institution Basal Research Fund(grant no.S2022ZD02).
文摘Wheat(Triticum aestivum,BBAADD)is an allohexaploid species that originated from two polyploidization events.The progenitors of the A and D subgenomes have been identified as Triticum urartu and Aegilops tauschii,respectively.Current research suggests that Aegilops speltoides is the closest but not the direct ancestor of the B subgenome.However,whether Ae.speltoides has contributed genomically to the wheat B subgenome and which chromosome regions are conserved between Ae.speltoides and the B subgenome remain unclear.Here,we assembled a high-quality reference genome for Ae.speltoides,resequenced 53 accessions from seven species(Aegilops bicornis,Aegilops longissima,Aegilops searsii,Aegilops sharonensis,Ae.speltoides,Aegilops mutica[syn.Amblyopyrum muticum],and Triticumdicoccoides)and revealed their genomic contributions to the wheat B subgenome.Our results showed that centromeric regions were particularly conserved between Aegilops and Triticum and revealed 0.17 Gb of conserved blocks between Ae.speltoides and the B subgenome.We classified five groups of conserved and non-conserved genes between Aegilops and Triticum,revealing their biological characteristics,differentiation in gene expression patterns,and collinear relationships between Ae.speltoides and the wheat B subgenome.We also identified gene families that expanded in Ae.speltoides during its evolution and 789 genes specific to Ae.speltoides.These genes can serve as genetic resources for improvement of adaptability to biotic and abiotic stress.The newly constructed reference genome and large-scale resequencing data for Sitopsis species will provide a valuable genomic resource for wheat genetic improvement and genomic studies.
基金supported by the National Key Research and Development Program of China (2022YFF1002902)Grant from Ministry of Agriculture and Rural Affairs of China, Talent Program and Agricultural Science and the Technology Innovation Program of CAAS (2060299-2)。
文摘The precise control of flowering time is important for the regional adaptability and productivity of many crops.Various categories of genes related to flowering have been isolated and characterized functionally in wheat(Triticum aestivum) in response to vernalization to adjust flowering initiation. Before vernalization, the inhibitory histone modification H3K27me3 is enriched in the promoter and the first intron of the vernalization gene VRN1.
基金This work was supported by the National Key Research and Development Program of China(2016YFD0101802,2018YFE0112000,2016YFD0101001,and 2017YFD0100900)the National Transgenic Research Project of China(2016ZX08009001-001-004)+2 种基金the Talent Program and Innovation Program of the Chinese Academy of Agricultural Sciences(CAAS)the Tianshan Innovation Team Plan(2020D14002)the National Natural Science Foundation of China(31871609,91935303 and 31771792).
文摘Bulked segregant analysis(BSA)is an efficient and low-cost strategy that is widely used to identify causal genes in segregating populations.BSA-based methods,such as BSA sequencing(Wenger et al.,2010),bulked segregant RNA sequencing(BSR-seq)(del Viso et al.,2012),and MutMap(Abe et al.,2012),are powerful tools that can be used for rapidly discovering genetic markers and gene mapping.Although BSA is increasingly being used in wheat(Triticum aestivum)gene mapping efforts,few user-friendly BSA tools have been developed for researchers lacking a strong bioinformatics background.Here,we developed the web-based BSA platform WheatGmap(https://www.wheatgmap.org),which integrates multiple BSA mapping models and large amounts of public data to accelerate gene cloning and functional research and facilitate resource sharing.
基金supported by the Special Applied Technology Research and Development of Guangdong Province(major project)(No.2015B020235013)the National Natural Science Foundation of China(No.21577027)the 2017 Central Special Fund for Soil,Preliminary Study on HarmlessTreatment and Comprehensive Utilization of Tailings in Dabao Mountain(No.18HK0108)
文摘Ion-exchange polymer and modified carbonization bacterial cellulose(CBC)electrodes were fabricated using varying amounts of cation-exchange polymers(glutaric acid(GA)and sulfosuccinic acid(SSA))and assembled within an asymmetric capacitive deionization unit(p-CDI).The performance of selective NO2-electro-adsorption was studied.The AC/CBCSSA group showed a better salt adsorption capacity(14.56 mg/g)and nitrite removal efficiency(71.01%)than the AC/CBC-GA(10.72 mg/g,47.83%)and AC/AC(4.81 mg/g,12.74%)groups.It was confirmed that the CBC-SSA/GA electrodes enhanced nitrite selectivity and increased the adsorption capacity,and the total amounts of adsorbed anions increased when the applied voltage was increased from 0.8 to 1.2 V,while the molar fraction of nitrate decreased.The competitive and preferential adsorption of anions was further investigated using different binary solutions of anions and occurred in the following sequence:NO2->SO42->NO3->F-≈Cl-.Furthermore,the p-CDI units were applied to remove nitrite in real wastewater samples,and the results showed that they had excellent reusability and application for use in dyeing wastewater treatment.
基金supported by the Local Innovative and Research Teams Project of Guangdong Pearl River Talents Program(No.2017BT01Z032)the National Natural Science Foundation of China(No.21577027)the 2017 Central Special Fund for Soil,Preliminary Study on Harmless Treatment and Comprehensive Utilization of Tailings in Dabao Mountain(No.18HK0108)。
文摘Nitrogenization is an effective method for improving the capacitive deionization(CDI)performance of porous carbon materials.In particular,polymer organic frameworks with heteroatom doping,containing an ordered pore structure and excellent electrochemical stability,are ideal precursors for carbon materials for high-performance CDI.In this study,a nitrogen-enriched micro-mesoporous carbon(NMC)electrode was fabricated by carbonizing a Schiff base network-1 at 500,600,and 700℃.Scanning electron microscopy,Fourier transform infrared spectroscopy,X-ray diffraction,N_(2) adsorption-desorption,the contact angle of water,cyclic voltammetry,and electrochemical impedance spectroscopy were used to characterize the morphological structure,wettability,Brunauer–Emmett–Teller surface areas,and electrochemical performance of the NMCs.The results showed that the NMC carbonized at 600℃ achieved the best specific capacitance(152.33 F/g),as well as a high electrosorption capacity(25.53 mg/g)because of its chemical composition(15.57%N)and surface area(312 m^(2)/g).These findings prove that NMC is viable as an electrode material for desalination by high-performance CDI applications.