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GAAD: A Gene and Autoimmiune Disease Association Database
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作者 guanting lu Xiaowen Hao +1 位作者 Wei-Hua Chen Shijie Mu 《Genomics, Proteomics & Bioinformatics》 SCIE CAS CSCD 2018年第4期252-261,共10页
Autoimmune diseases (ADs) arise from an abnormal immune response of the body against substances and tissues normally present in the body. More than a hundred of ADs have been described in the literature so far. Alth... Autoimmune diseases (ADs) arise from an abnormal immune response of the body against substances and tissues normally present in the body. More than a hundred of ADs have been described in the literature so far. Although their etiology remains largely unclear, various types of ADs tend to share more associated genes with other types of ADs than with non-AD types. Here we present GAAD, a gene and AD association database. In GAAD, we collected 44,762 associations between 49 ADs and 4249 genes from public databases and MEDLINE documents. We manually verified the associations to ensure the quality and credibility. We reconstructed and recapitulated the relationships among ADs using their shared genes, which further validated the quality of our data. We also provided a list of significantly co-occurring gene pairs among ADs;with embedded tools, users can query gene co-occurrences and construct customized cooccurrence network with genes of interest. To make GAAD more straightforward to experimental biologists and medical scientists, we extracted additional information describing the associations through text mining, including the putative diagnostic value of the associations, type and position of gene polymorphisms, expression changes of implicated genes, as well as the phenotypical consequences, and grouped the associations accordingly. GAAD is freely available at http://gaad.medgenius.info. 展开更多
关键词 Autoimmune diseases Disease-gene association DATABASE Text mining
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A Long Type of TBCK Is a Novel Cytoplasmic and Mitotic Apparatus-Associated Protein Likely Suppressing Cell Proliferation
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作者 Jin Wu Qianyi Li +7 位作者 Yan Li Jing Lin Dong Yang Guixin Zhu Limin Wang Dacheng He guanting lu Changqing Zeng 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2014年第2期69-72,共4页
Autoantibodies from patients with various connective tissue diseases have been shown to be specific probes that can detect cellular structures, including centrosome, centromere/kineto- chore, spliceosome, Golgi comple... Autoantibodies from patients with various connective tissue diseases have been shown to be specific probes that can detect cellular structures, including centrosome, centromere/kineto- chore, spliceosome, Golgi complex and the rough endoplasmic reticulum (Louvard et al., 1982; Rattner et al., 1998; 展开更多
关键词 Cell TBC A Long Type of TBCK Is a Novel Cytoplasmic and Mitotic Apparatus-Associated Protein Likely Suppressing Cell Proliferation
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