The coronavirus disease 2019(COVID-19)pandemic caused by frequently mutating severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)has had a worldwide impact.However,detailed data on the potential aerosol transmi...The coronavirus disease 2019(COVID-19)pandemic caused by frequently mutating severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)has had a worldwide impact.However,detailed data on the potential aerosol transmission of SARS-CoV-2 in real-world and controlled laboratory settings remain sparse.During the COVID-19 pandemic in Shanghai,China in 2022,samples were collected in a Fangcang shelter hospital,a large-scale temporary hospital rapidly built by converting the existing National Exhibition and Convention Center(Shanghai)into a health care facility.Aerosol samples at different sites and intervals around patients and in public areas,surface samples,and pharyngeal swab samples from corresponding patients were included.Samples were tested for SARS-CoV-2 using real-time quantitative polymerase chain reaction(RT-qPCR)assays,followed by sequencing if the cycle threshold(Ct)value was<30.The positivity rate for SARS-CoV-2 in aerosol samples was high in contaminated zones(37.5%,104/277),especially around the bed(41.2%,68/165)and near ventilation inlets(45.2%,14/31).The prevalence of SARS-CoV-2 around the bed,public areas,and air inlets of exhaust vents fluctuated and was closely related to the positivity rate among patients at corresponding sampling sites.Some surface samples of different personal protective equipment from medical staff had high positivity rates.Sixty sequences of joined ORF1ab and spike genes obtained from sixty samples represented two main clusters of Omicron SARS-CoV-2.There was consistency in virus sequences from the same patient and their environment,and the detected virus sequences matched those of virus strains in circulation during the collection periods,which indicated a high likelihood of cross-contamination in the Fangcang shelter hospital.In summary,the results provide a quantitative and real landscape of the aerosol transmission of SARS-CoV-2 and a patient-centered view of contamination in large and enclosed spaces and offer a useful guide for taking targeted measures to avoid nosocomial infections during the management of SARS-CoV-2 or other respiratory virus diseases in a Fangcang shelter hospital.展开更多
Mobile location-based services(MLBS)refer to services around geographic location data.Mobile terminals use wireless communication networks(or satellite positioning systems)to obtain users’geographic location coordina...Mobile location-based services(MLBS)refer to services around geographic location data.Mobile terminals use wireless communication networks(or satellite positioning systems)to obtain users’geographic location coordinate information based on spatial databases and integrate with other information to provide users with required location-related services.The development of systems based on MLBS has significance and practical value.In this paper a visualization management information system for personnel in major events based on microservices,namely MEPMIS,is designed and implemented by using MLBS.The system consists of a server and a client app,and it has some functions including map search and query,personnel positioning and scheduling,location management,messaging,and location service.Managers of the events can quickly search and locate the staff on the specific area of the map in real-time,and make broadcasting messages to the staff,and manage the staff.The client app is developed on the Android system,by which staff users can send the positions information to the server timely.The client users can search fuzzily near their peers and list their locations,and also call near peers through sending messages or query the history record of staff locations.In the design of the system,several new proposed techniques,including visual annotation method for overlapping locations,correcting trajectory drift algorithm,microservices-based overall system architecture methodology and other new techniques,which are applied to the implementation of the system.Also,HTML5,JQuery,MLBS APIs(Application Program Interfaces)related programming techniques have been used and combined with loading Ajax asynchronously and Json data encapsulation,map marker optimization techniques,that can improve the positioning accuracy and the performance of the system.The developed system with practical functions can enhance the efficiencies of the organization and management of major events.展开更多
Plant NDR1/HIN1-like(NHL)genes play an important role in triggering plant defenses in response to biotic stresses.In this study,we performed a genome-wide identification of the NHL genes in pepper(Capsicum annuum L.)a...Plant NDR1/HIN1-like(NHL)genes play an important role in triggering plant defenses in response to biotic stresses.In this study,we performed a genome-wide identification of the NHL genes in pepper(Capsicum annuum L.)and characterized the functional roles of these CaNHL genes in response to abiotic stresses and infection by different pathogens.Phylogenetic analysis revealed that CaNHLs can be classified into five distinct subgroups,with each group containing generic and specific motifs.Regulatory element analysis showed that the majority of the promoter regions of the identified CaNHLs contain jasmonic acid(JA)-responsive and salicylic acid(SA)-responsive elements,and transcriptomic analysis revealed that CaNHL genes are expressed in all the examined tissues of pepper.The CaNHL1,CaNHL4,CaNHL6,CaNHL10,CaNHL11,and CaNHL12 genes were significantly upregulated under abiotic stress as well as in response to different pathogens,such as TMV,Phytophthora capsici and Pseudomonas syringae.In addition,we found that CaNHL4 localizes to the plasma membrane.CaNHL4-silenced pepper plants display significantly increased susceptibility to TMV,Phytophthora capsici and Pseudomonas syringae,exhibiting reduced expression of JA-related and SA-related genes and reduced ROS production.However,transient overexpression of CaNHL4 in pepper increases the expression of JArelated and SA-related genes,enhances the accumulation of ROS,and inhibits the infection of these three pathogens.Collectively,for the first time,we identified the NHL genes in pepper and demonstrated that CaNHL4 is involved in the production of ROS and that it also regulates the expression of JA-related and SA-related genes in response to different pathogens,suggesting that members of the CaNHL family play an essential role in the disease resistance of pepper.展开更多
In the field of plant protection,certain methods for assessing the current pest situation and implementing appropriate protection countermeasures can effectively protect plants while saving manpower and material resou...In the field of plant protection,certain methods for assessing the current pest situation and implementing appropriate protection countermeasures can effectively protect plants while saving manpower and material resources.However,current pest monitoring methods are primarily based on the stage of"seeing,hand checking,disc shooting and net catching",and the level of automation is low.Manual methods are time-consuming,prone to error,and difficult to review.We designed a method based on infrared thermography principle for counting Ricania guttata(Walker),a pest which is harmful to mangrove plants.This method,which is based on thermal infrared images and binarized image segmentation,realizes image processing of surface temperature,effectively distinguishes pests and sticky board,automatically counts the number of pests,and expands the data source based on image processing.Furthermore,this method contributes to the solution of the problem that counting error of insect close to the color of sticky board is greater in image recognition of visible light,when the pest color is close to the stick board.It can facilitate manual investigation of mangrove pests,simply and efficiently count the number of pests on the stick board,and provide data and technical support for pest condition analysis and control.展开更多
1.Introduction,Understanding and predicting microstructure and its relationship with the mechanical properties of metallic materials require detailed knowledge of phase transformations(PTs)and plastic deformations(PDs...1.Introduction,Understanding and predicting microstructure and its relationship with the mechanical properties of metallic materials require detailed knowledge of phase transformations(PTs)and plastic deformations(PDs).These two processes,as central topics in material science,can be fundamentally described to a large extent by a framework of thermodynamic and kinetics(thermo-kinetics).The situation of PTs arises when the microstructure is losing phase stability,whereas the issue of PDs corresponds to the break of mechanical stability,all of which can be uniformly defined as the so-called loss of thermodynamic stability(TS).In this context,the higher TS will lead to the higher driving force G essentially required for the PT and/or PD forming and/or changing the microstructure.In the case of PTs,extensive examples showing the high TS can be found,such as martensite transformations(MTs)upon continuous cooling or strain[1,2],coherent precipitation[3,4],so-called Schwarz crystal[5],etc.展开更多
Designing structured materials with optimized mechanical properties generally focuses on engineering microstructures,which are closely determined by the processing routes,such as phase transformations(PTs)and plastic ...Designing structured materials with optimized mechanical properties generally focuses on engineering microstructures,which are closely determined by the processing routes,such as phase transformations(PTs)and plastic deformations(PDs).Both PTs and PDs follow inherent trade-off relation between thermodynamic driving force ΔG and kinetic energy barrier Q,i.e.,so-called thermo-kinetic correlation.By analyzing nucleation and growth and proposing a conception of negative driving force integrating strain energy,interface energy and any kind of energy that equivalently inhibits the PT itself,ΔG^(S),unified expressions for the thermo-kinetic correlation and generalized stability(GS)were derived for three kinds of PTs,i.e.,diffusive PTs with simultaneously decreasedΔG and increased Q,diffusive PTs with simultaneously increasedΔG and decreased Q,and displacive PTs with simultaneously increased ΔG and decreased Q.This leads to so-called thermo-kinetic connectivity by integrating the thermo-kinetic correlation and the GS,where,by application in typical PTs,it was clearly shown,a criterion of high ΔG-high GS can be predicted by modulating chemical driving force,negative driving force and kinetic energy barrier for diffusion or nucleation.Following thermo-kinetic connectivity,analogous procedure for dislocation evolution upon PDs was performed,and materials design in terms of the highΔG-high GS criterion was discussed and prospected.展开更多
Dear Editor,By the end of June 2020,the pandemic of coronavirus diseases 2019(COVID-19)had resulted in more than 10 million individuals,all over the world,being infected with the severe acute respiratory syndrome coro...Dear Editor,By the end of June 2020,the pandemic of coronavirus diseases 2019(COVID-19)had resulted in more than 10 million individuals,all over the world,being infected with the severe acute respiratory syndrome coronavirus 2(SARS-CoV-2).1 The high contagiousness of SARS-CoV-2 virus was largely attributed to the relatively unique sequence composition in its spike(S)glycoprotein,which is in charge of the host entry by interacting with its cellular receptor angiotensin-converting enzyme 2(ACE2).2,3 The S glycoprotein can be processed into an N terminal S1 fragment that is responsible for receptor binding,and a C terminal S2 fragment that functions to promote membrane fusion.4 SARS-CoV-2 is a type of single-stranded positive-sense ribonucleic acid(RNA)virus,and an increasing number of mutations were identified across the SARS-CoV-2 genome,including the region encoding S glycoprotein.Nevertheless,the functional implications of these mutations remain largely unknown,we here reported the mutation analysis of S gene and a functional exploration of the dominant D614G mutation.展开更多
The coronavirus disease 2019(COVID-19)pandemic caused by severe acute respiratory syndrome coronavirus 2(SARSCoV-2)is a global crisis.Clinical candidates with high efficacy,ready availability,and that do not develop r...The coronavirus disease 2019(COVID-19)pandemic caused by severe acute respiratory syndrome coronavirus 2(SARSCoV-2)is a global crisis.Clinical candidates with high efficacy,ready availability,and that do not develop resistance are in urgent need.Despite that screening to repurpose clinically approved drugs has provided a variety of hits shown to be effective against SARS-CoV-2 infection in cell culture,there are few confirmed antiviral candidates in vivo.In this study,94 compounds showing high antiviral activity against SARS-CoV-2 in Vero E6 cells were identified from 2,580 FDA-approved small-molecule drugs.Among them,24 compounds with low cytotoxicity were selected,and of these,17 compounds also effectively suppressed SARS-CoV-2 infection in He La cells transduced with human ACE2.Six compounds disturb multiple processes of the SARSCoV-2 life cycle.Their prophylactic efficacies were determined in vivo using Syrian hamsters challenged with SARS-CoV-2infection.Seven compounds reduced weight loss and promoted weight regain of hamsters infected not only with the original strain but also the D614G variant.Except for cisatracurium,six compounds reduced hamster pulmonary viral load,and IL-6 and TNF-αm RNAwhen assayed at 4 d postinfection.In particular,sertraline,salinomycin,and gilteritinib showed similar protective effects as remdesivir in vivo and did not induce antiviral drug resistance after 10 serial passages of SARS-CoV-2 in vitro,suggesting promising application for COVID-19 treatment.展开更多
基金supported by National Key Research and Development Program of China(2019YFC1200500)supported by Emergency Key Program of Guangzhou Laboratory(EKPG21-01)supported by National Natural Science Foundation of China(32070166)。
文摘The coronavirus disease 2019(COVID-19)pandemic caused by frequently mutating severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)has had a worldwide impact.However,detailed data on the potential aerosol transmission of SARS-CoV-2 in real-world and controlled laboratory settings remain sparse.During the COVID-19 pandemic in Shanghai,China in 2022,samples were collected in a Fangcang shelter hospital,a large-scale temporary hospital rapidly built by converting the existing National Exhibition and Convention Center(Shanghai)into a health care facility.Aerosol samples at different sites and intervals around patients and in public areas,surface samples,and pharyngeal swab samples from corresponding patients were included.Samples were tested for SARS-CoV-2 using real-time quantitative polymerase chain reaction(RT-qPCR)assays,followed by sequencing if the cycle threshold(Ct)value was<30.The positivity rate for SARS-CoV-2 in aerosol samples was high in contaminated zones(37.5%,104/277),especially around the bed(41.2%,68/165)and near ventilation inlets(45.2%,14/31).The prevalence of SARS-CoV-2 around the bed,public areas,and air inlets of exhaust vents fluctuated and was closely related to the positivity rate among patients at corresponding sampling sites.Some surface samples of different personal protective equipment from medical staff had high positivity rates.Sixty sequences of joined ORF1ab and spike genes obtained from sixty samples represented two main clusters of Omicron SARS-CoV-2.There was consistency in virus sequences from the same patient and their environment,and the detected virus sequences matched those of virus strains in circulation during the collection periods,which indicated a high likelihood of cross-contamination in the Fangcang shelter hospital.In summary,the results provide a quantitative and real landscape of the aerosol transmission of SARS-CoV-2 and a patient-centered view of contamination in large and enclosed spaces and offer a useful guide for taking targeted measures to avoid nosocomial infections during the management of SARS-CoV-2 or other respiratory virus diseases in a Fangcang shelter hospital.
基金The work is supported by the Tianjin Planning Project of Philosophy and Social Science under Grant No.TJGL20-018 for Dr.L.J.Hou of Tianjin Normal University,China。
文摘Mobile location-based services(MLBS)refer to services around geographic location data.Mobile terminals use wireless communication networks(or satellite positioning systems)to obtain users’geographic location coordinate information based on spatial databases and integrate with other information to provide users with required location-related services.The development of systems based on MLBS has significance and practical value.In this paper a visualization management information system for personnel in major events based on microservices,namely MEPMIS,is designed and implemented by using MLBS.The system consists of a server and a client app,and it has some functions including map search and query,personnel positioning and scheduling,location management,messaging,and location service.Managers of the events can quickly search and locate the staff on the specific area of the map in real-time,and make broadcasting messages to the staff,and manage the staff.The client app is developed on the Android system,by which staff users can send the positions information to the server timely.The client users can search fuzzily near their peers and list their locations,and also call near peers through sending messages or query the history record of staff locations.In the design of the system,several new proposed techniques,including visual annotation method for overlapping locations,correcting trajectory drift algorithm,microservices-based overall system architecture methodology and other new techniques,which are applied to the implementation of the system.Also,HTML5,JQuery,MLBS APIs(Application Program Interfaces)related programming techniques have been used and combined with loading Ajax asynchronously and Json data encapsulation,map marker optimization techniques,that can improve the positioning accuracy and the performance of the system.The developed system with practical functions can enhance the efficiencies of the organization and management of major events.
基金supported by The National Natural Science Foundation of China(31670148,31870147)the Fundamental Research Funds for the Central Universities(XDJK2020B064)+1 种基金the Science and Technology Projects of the Chongqing Company of China Tobacco Corporation(NY20180401070001,NY20180401070008,NY20180401070010)Southwest University’s Training Program of Innovation and Entrepreneurship for Undergraduates(Project No.X201910635133).
文摘Plant NDR1/HIN1-like(NHL)genes play an important role in triggering plant defenses in response to biotic stresses.In this study,we performed a genome-wide identification of the NHL genes in pepper(Capsicum annuum L.)and characterized the functional roles of these CaNHL genes in response to abiotic stresses and infection by different pathogens.Phylogenetic analysis revealed that CaNHLs can be classified into five distinct subgroups,with each group containing generic and specific motifs.Regulatory element analysis showed that the majority of the promoter regions of the identified CaNHLs contain jasmonic acid(JA)-responsive and salicylic acid(SA)-responsive elements,and transcriptomic analysis revealed that CaNHL genes are expressed in all the examined tissues of pepper.The CaNHL1,CaNHL4,CaNHL6,CaNHL10,CaNHL11,and CaNHL12 genes were significantly upregulated under abiotic stress as well as in response to different pathogens,such as TMV,Phytophthora capsici and Pseudomonas syringae.In addition,we found that CaNHL4 localizes to the plasma membrane.CaNHL4-silenced pepper plants display significantly increased susceptibility to TMV,Phytophthora capsici and Pseudomonas syringae,exhibiting reduced expression of JA-related and SA-related genes and reduced ROS production.However,transient overexpression of CaNHL4 in pepper increases the expression of JArelated and SA-related genes,enhances the accumulation of ROS,and inhibits the infection of these three pathogens.Collectively,for the first time,we identified the NHL genes in pepper and demonstrated that CaNHL4 is involved in the production of ROS and that it also regulates the expression of JA-related and SA-related genes in response to different pathogens,suggesting that members of the CaNHL family play an essential role in the disease resistance of pepper.
文摘In the field of plant protection,certain methods for assessing the current pest situation and implementing appropriate protection countermeasures can effectively protect plants while saving manpower and material resources.However,current pest monitoring methods are primarily based on the stage of"seeing,hand checking,disc shooting and net catching",and the level of automation is low.Manual methods are time-consuming,prone to error,and difficult to review.We designed a method based on infrared thermography principle for counting Ricania guttata(Walker),a pest which is harmful to mangrove plants.This method,which is based on thermal infrared images and binarized image segmentation,realizes image processing of surface temperature,effectively distinguishes pests and sticky board,automatically counts the number of pests,and expands the data source based on image processing.Furthermore,this method contributes to the solution of the problem that counting error of insect close to the color of sticky board is greater in image recognition of visible light,when the pest color is close to the stick board.It can facilitate manual investigation of mangrove pests,simply and efficiently count the number of pests on the stick board,and provide data and technical support for pest condition analysis and control.
基金the financial support of the Natural Science Foundation of China(Nos.52130110,51790480,52271116,and 51901185)the Fundamental Research Funds for the Central Universities(No.D5000220052).
文摘1.Introduction,Understanding and predicting microstructure and its relationship with the mechanical properties of metallic materials require detailed knowledge of phase transformations(PTs)and plastic deformations(PDs).These two processes,as central topics in material science,can be fundamentally described to a large extent by a framework of thermodynamic and kinetics(thermo-kinetics).The situation of PTs arises when the microstructure is losing phase stability,whereas the issue of PDs corresponds to the break of mechanical stability,all of which can be uniformly defined as the so-called loss of thermodynamic stability(TS).In this context,the higher TS will lead to the higher driving force G essentially required for the PT and/or PD forming and/or changing the microstructure.In the case of PTs,extensive examples showing the high TS can be found,such as martensite transformations(MTs)upon continuous cooling or strain[1,2],coherent precipitation[3,4],so-called Schwarz crystal[5],etc.
基金the National Key R&D Program of China(No.2017YFB0703001)the National Natural Science Foundation of China(Nos.52130110,51790481,51901182 and 51901185)the Natural Science Foundation of Shaanxi Province(Nos.2020JQ-157 and 2020JQ-153)。
文摘Designing structured materials with optimized mechanical properties generally focuses on engineering microstructures,which are closely determined by the processing routes,such as phase transformations(PTs)and plastic deformations(PDs).Both PTs and PDs follow inherent trade-off relation between thermodynamic driving force ΔG and kinetic energy barrier Q,i.e.,so-called thermo-kinetic correlation.By analyzing nucleation and growth and proposing a conception of negative driving force integrating strain energy,interface energy and any kind of energy that equivalently inhibits the PT itself,ΔG^(S),unified expressions for the thermo-kinetic correlation and generalized stability(GS)were derived for three kinds of PTs,i.e.,diffusive PTs with simultaneously decreasedΔG and increased Q,diffusive PTs with simultaneously increasedΔG and decreased Q,and displacive PTs with simultaneously increased ΔG and decreased Q.This leads to so-called thermo-kinetic connectivity by integrating the thermo-kinetic correlation and the GS,where,by application in typical PTs,it was clearly shown,a criterion of high ΔG-high GS can be predicted by modulating chemical driving force,negative driving force and kinetic energy barrier for diffusion or nucleation.Following thermo-kinetic connectivity,analogous procedure for dislocation evolution upon PDs was performed,and materials design in terms of the highΔG-high GS criterion was discussed and prospected.
基金supported by the National Key Research&Development Program of China(2019YFA09003801,2018YFA0900804)the National Natural Science Foundation of China(31671432,31970685,81572799).
文摘Dear Editor,By the end of June 2020,the pandemic of coronavirus diseases 2019(COVID-19)had resulted in more than 10 million individuals,all over the world,being infected with the severe acute respiratory syndrome coronavirus 2(SARS-CoV-2).1 The high contagiousness of SARS-CoV-2 virus was largely attributed to the relatively unique sequence composition in its spike(S)glycoprotein,which is in charge of the host entry by interacting with its cellular receptor angiotensin-converting enzyme 2(ACE2).2,3 The S glycoprotein can be processed into an N terminal S1 fragment that is responsible for receptor binding,and a C terminal S2 fragment that functions to promote membrane fusion.4 SARS-CoV-2 is a type of single-stranded positive-sense ribonucleic acid(RNA)virus,and an increasing number of mutations were identified across the SARS-CoV-2 genome,including the region encoding S glycoprotein.Nevertheless,the functional implications of these mutations remain largely unknown,we here reported the mutation analysis of S gene and a functional exploration of the dominant D614G mutation.
基金supported by the National Natural Science Foundation of China(31570170)the National Key Research and Development Program of China(2016YFC1200401)。
文摘The coronavirus disease 2019(COVID-19)pandemic caused by severe acute respiratory syndrome coronavirus 2(SARSCoV-2)is a global crisis.Clinical candidates with high efficacy,ready availability,and that do not develop resistance are in urgent need.Despite that screening to repurpose clinically approved drugs has provided a variety of hits shown to be effective against SARS-CoV-2 infection in cell culture,there are few confirmed antiviral candidates in vivo.In this study,94 compounds showing high antiviral activity against SARS-CoV-2 in Vero E6 cells were identified from 2,580 FDA-approved small-molecule drugs.Among them,24 compounds with low cytotoxicity were selected,and of these,17 compounds also effectively suppressed SARS-CoV-2 infection in He La cells transduced with human ACE2.Six compounds disturb multiple processes of the SARSCoV-2 life cycle.Their prophylactic efficacies were determined in vivo using Syrian hamsters challenged with SARS-CoV-2infection.Seven compounds reduced weight loss and promoted weight regain of hamsters infected not only with the original strain but also the D614G variant.Except for cisatracurium,six compounds reduced hamster pulmonary viral load,and IL-6 and TNF-αm RNAwhen assayed at 4 d postinfection.In particular,sertraline,salinomycin,and gilteritinib showed similar protective effects as remdesivir in vivo and did not induce antiviral drug resistance after 10 serial passages of SARS-CoV-2 in vitro,suggesting promising application for COVID-19 treatment.