Fruit lignification is of significant economic importance because it affects the quality of fruit and the production of seed oil.The specified lignification pattern in Camellia chekiangoleosa fruits plays critical rol...Fruit lignification is of significant economic importance because it affects the quality of fruit and the production of seed oil.The specified lignification pattern in Camellia chekiangoleosa fruits plays critical roles in its seed oil yield,but little is known about how this lignification process is regulated.Here,we report on a comprehensive tissue-specific transcriptomics analysis conducted for C.chekiangoleosa fruit.By mining the differentially expressed genes,we found that lignin biosynthesis and transcriptional regulation pathways were significantly enriched in the lignified tissues.The homolog of NST-like transcription factor,CcNST1,was highly expressed in lignified seed coat and endocarp tissues;transgenic analyses of CcNST1 in Arabidopsis and hybrid poplar revealed the enhanced lignification levels of various tissues.Gene expression analysis of the transgenic lines uncovered potential downstream genes involved in the regulation of lignin biosynthesis.This work provides a valuable gene expression resource and identified the pivotal role of CcNST1 in regulating the lignin biosynthesis underlying fruit lignification.展开更多
Phosphatidylserine （PS）, a quantitatively minor membrane phospholipid, is involved in many biological processes besides its role in membrane structure. One PS synthesis gene, PHOSPHATIDYLSERINE SYNTHASE1 （PSSl）, h...Phosphatidylserine （PS）, a quantitatively minor membrane phospholipid, is involved in many biological processes besides its role in membrane structure. One PS synthesis gene, PHOSPHATIDYLSERINE SYNTHASE1 （PSSl）, has been discovered to be required for microspore development in Arabidopsis thaliana L. but how PSS1 affects postembryonic development is still largely unknown. Here, we show that PSSl is also required for inflorescence meristem and organ development in Arabidopsis. Disruption of PSSI causes severe dwarfism, smaller lateral organs and reduced size of inflorescence meristem. Morphological and molecular studies suggest that both cell division and cell elongation are affected in the pssl-1 mutant. RNA in situ hybridization and promoter GUS analysis show that expression of both WUSCHEL （WUS） and CLA VA TA3 （CL V3） depend on PSS1. Moreover, the defect in meristem maintenance is recovered and the expression of WUS and CLV3 are restored in the pssl-1 clvl-1 double mutant. Both SHOOTSTEMLESS （STM） and BREVIPEDICELLUS （BP） are upregulated, and auxin distribution is disrupted in rosette leaves of pssl-1. However, expression of BP, which is also a regulator of internode development, is lost in the pssl-1 inflorescence stem. Our data suggest that PSS1 plays essential roles in inflorescence meristem maintenance through the WUS-CLV pathway, and in leaf and internode development by differentially regulating the class I KNOX genes.展开更多
Human life intimately depends on plants for food,biomaterials,health,energy,and a sustainable environment.Various plants have been genetically improved mostly through breeding,along with limited modification via genet...Human life intimately depends on plants for food,biomaterials,health,energy,and a sustainable environment.Various plants have been genetically improved mostly through breeding,along with limited modification via genetic engineering,yet they are still not able to meet the ever-increasing needs,in terms of both quantity and quality,resulting from the rapid increase in world population and expected standards of living.A step change that may address these challenges would be to expand the potential of plants using biosystems design approaches.This represents a shift in plant science research from relatively simple trial-and-error approaches to innovative strategies based on predictive models of biological systems.Plant biosystems design seeks to accelerate plant genetic improvement using genome editing and genetic circuit engineering or create novel plant systems through de novo synthesis of plant genomes.From this perspective,we present a comprehensive roadmap of plant biosystems design covering theories,principles,and technical methods,along with potential applications in basic and applied plant biology research.We highlight current challenges,future opportunities,and research priorities,along with a framework for international collaboration,towards rapid advancement of this emerging interdisciplinary area of research.Finally,we discuss the importance of social responsibility in utilizing plant biosystems design and suggest strategies for improving public perception,trust,and acceptance.展开更多
基金supported by Nonprofit Research Projects(CAFYBB2021QD001)of Chinese Academy of ForestryNational Key R&D Program of China(2019YFD1001602)。
文摘Fruit lignification is of significant economic importance because it affects the quality of fruit and the production of seed oil.The specified lignification pattern in Camellia chekiangoleosa fruits plays critical roles in its seed oil yield,but little is known about how this lignification process is regulated.Here,we report on a comprehensive tissue-specific transcriptomics analysis conducted for C.chekiangoleosa fruit.By mining the differentially expressed genes,we found that lignin biosynthesis and transcriptional regulation pathways were significantly enriched in the lignified tissues.The homolog of NST-like transcription factor,CcNST1,was highly expressed in lignified seed coat and endocarp tissues;transgenic analyses of CcNST1 in Arabidopsis and hybrid poplar revealed the enhanced lignification levels of various tissues.Gene expression analysis of the transgenic lines uncovered potential downstream genes involved in the regulation of lignin biosynthesis.This work provides a valuable gene expression resource and identified the pivotal role of CcNST1 in regulating the lignin biosynthesis underlying fruit lignification.
基金supported by the National Natural Science Foundation of China(Grant numbers 90717106 and 30821004 to D.L.
文摘Phosphatidylserine （PS）, a quantitatively minor membrane phospholipid, is involved in many biological processes besides its role in membrane structure. One PS synthesis gene, PHOSPHATIDYLSERINE SYNTHASE1 （PSSl）, has been discovered to be required for microspore development in Arabidopsis thaliana L. but how PSS1 affects postembryonic development is still largely unknown. Here, we show that PSSl is also required for inflorescence meristem and organ development in Arabidopsis. Disruption of PSSI causes severe dwarfism, smaller lateral organs and reduced size of inflorescence meristem. Morphological and molecular studies suggest that both cell division and cell elongation are affected in the pssl-1 mutant. RNA in situ hybridization and promoter GUS analysis show that expression of both WUSCHEL （WUS） and CLA VA TA3 （CL V3） depend on PSS1. Moreover, the defect in meristem maintenance is recovered and the expression of WUS and CLV3 are restored in the pssl-1 clvl-1 double mutant. Both SHOOTSTEMLESS （STM） and BREVIPEDICELLUS （BP） are upregulated, and auxin distribution is disrupted in rosette leaves of pssl-1. However, expression of BP, which is also a regulator of internode development, is lost in the pssl-1 inflorescence stem. Our data suggest that PSS1 plays essential roles in inflorescence meristem maintenance through the WUS-CLV pathway, and in leaf and internode development by differentially regulating the class I KNOX genes.
基金The writing of this manuscript was supported by the Center for Bioenergy Innovation,a U.S.Department of Energy(DOE)Bioenergy Research Center supported by the Biological and Environmental Research(BER)program,the Laboratory Directed Research and Development program of Oak Ridge National Laboratory,and the U.S.DOE BER Genomic Science Program,as part of the Secure Ecosystem Engineering and Design Scientific Focus Area and the Plant-Microbe Interfaces Scientific Focus AreaYY is supported by NSF Plant Genome Research Project Grant(1740874)and the USDA National Institute of Food and Agriculture and Hatch Appropriations under Project PEN04659 and Accession#1016432.HY is supported by Nonprofit Research Projects(CAFYBB2018ZY001-1)of Chinese Academy of Forestry+3 种基金CTT acknowledges the financial support from the NSF CAREER award(NSF#1553250)and the DOE BER Genomic Science Program(DE-SC0019412)PMS acknowledges support from the Joint BioEnergy Institute which is supported by the U.S.DOE Office of Science,BER program under Contract No.DE-AC02-05CH11231 between Lawrence Berkeley National Laboratory and the US Department of EnergyDL acknowledges financial support through the National Science Foundation(NSF)under Award Number 1833402.AJM acknowledges financial support from the UK Biotechnology and Biological Sciences Research Council(grants BB/M006468/1 and BB/S015531/1)the Leverhulme Trust(grant RPG-2017-402).
文摘Human life intimately depends on plants for food,biomaterials,health,energy,and a sustainable environment.Various plants have been genetically improved mostly through breeding,along with limited modification via genetic engineering,yet they are still not able to meet the ever-increasing needs,in terms of both quantity and quality,resulting from the rapid increase in world population and expected standards of living.A step change that may address these challenges would be to expand the potential of plants using biosystems design approaches.This represents a shift in plant science research from relatively simple trial-and-error approaches to innovative strategies based on predictive models of biological systems.Plant biosystems design seeks to accelerate plant genetic improvement using genome editing and genetic circuit engineering or create novel plant systems through de novo synthesis of plant genomes.From this perspective,we present a comprehensive roadmap of plant biosystems design covering theories,principles,and technical methods,along with potential applications in basic and applied plant biology research.We highlight current challenges,future opportunities,and research priorities,along with a framework for international collaboration,towards rapid advancement of this emerging interdisciplinary area of research.Finally,we discuss the importance of social responsibility in utilizing plant biosystems design and suggest strategies for improving public perception,trust,and acceptance.
