As the‘Green Revolution’gene,SD1(encoding GA20ox2),has been widely applied to improve yield in rice breeding.However,research on its transcriptional regulation is limited.Here,we identified a transcription factor Os...As the‘Green Revolution’gene,SD1(encoding GA20ox2),has been widely applied to improve yield in rice breeding.However,research on its transcriptional regulation is limited.Here,we identified a transcription factor OsbZIP01,which can suppress the expression of SD1 and regulate gibberellin(GA)biosynthesis in rice.Knockout mutants of OsbZIP01 exhibited increased plant height,while the overexpression lines showed a semi-dwarf phenotype and diminished germination rate.Furthermore,the semi-dwarf phenotype of OE-bZIP01,was caused by the reduced internode length,which was accompanied by a thin stem width.The predominant expression of OsbZIP01 was observed in leaves and sheaths.OsbZIP01 protein was localized in the nucleus and showed transcriptional repression activity.In addition,OsbZIP01 could directly bind to the promoter of the OsSD1 gene,and inhibit its transcription.The semi-dwarf phenotype of OE-bZIP01 could be rescued by exogenous GA_(3).Meanwhile,the bzip01 sd1 double mutant showed a shorter shoot length compared with the wild type,indicating that OsbZIP01 regulated plant growth mainly through the GA biosynthesis pathway.Collectively,OsbZIP01 negatively regulates GA biosynthesis by restraining SD1 transcription,thereby affecting plant growth and development.展开更多
【目的】根据灌浆期水稻内源激素水平解析稻穗不同部位籽粒产量性状的差异。【方法】以相同环境下种植的嘉58等6个浙江省常规粳稻品种为实验材料,将稻穗籽粒按一次枝梗在主穗上的节点划分为稻穗上部、中部和下部籽粒,测定了不同部位籽...【目的】根据灌浆期水稻内源激素水平解析稻穗不同部位籽粒产量性状的差异。【方法】以相同环境下种植的嘉58等6个浙江省常规粳稻品种为实验材料,将稻穗籽粒按一次枝梗在主穗上的节点划分为稻穗上部、中部和下部籽粒,测定了不同部位籽粒水杨酸(SA)、脱落酸(ABA)、吲哚乙酸(IAA)和生物量的动态变化及收获后籽粒千粒重、整精米率、长宽比、胶稠度和碱消值等相关性状。【结果】籽粒在灌浆期内0~35 d处于持续增重状态,且表现为上部>中部>下部,花后35 d各品种不同部位籽粒生物量的变异系数为1.66%~10.26%,35 d以后不同部位籽粒生物量的差距逐渐缩小但仍有差异,籽粒成熟后千粒重仍表现为上部籽粒(25.08~33.88g)>中部(24.04~32.49 g)>下部(23.46~31.78 g);不同部位间籽粒整精米率与长宽比略有差异,且千粒重与长宽比呈极显著正相关(r=0.89, P<0.01),与整精米率呈极显著负相关(r=-0.68, P<0.01);在胶稠度、碱消值方面,品种间的差异显著大于部位间的差异;三种内源激素在不同部位籽粒中的差异均较为显著,且SA差异最为稳定,全周期不同部位间籽粒SA含量变异系数为0.59%~25.90%,ABA和IAA变异系数依次为1.35%~66.25%和0.16%~81.04%。不同部位SA含量在灌浆初期与末期正相反,前期表现为上部籽粒>中部>下部,末期却表现为下部籽粒>中部>上部。【结论】不同部位籽粒的内源激素及产量等相关性状差异均较为显著,激素含量差异以SA最为稳定。SA与ABA和IAA分别呈显著正相关(r=0.54, P <0.05)和极显著正相关(r=0.59, P<0.01),与千粒重呈显著负相关(r=-0.53, P <0.05),其与长宽比和整精米率也分别为极显著负相关(r=-0.66, P <0.01)和极显著正相关(r=0.95, P <0.01)。展开更多
Isoamylase 1(ISA1) is an isoamylase-type debranching enzyme which plays a predominant role in amylopectin synthesis. In this study, the clustered regularly interspaced short palindromic repeats(CRISPR)/CRISPR-associat...Isoamylase 1(ISA1) is an isoamylase-type debranching enzyme which plays a predominant role in amylopectin synthesis. In this study, the clustered regularly interspaced short palindromic repeats(CRISPR)/CRISPR-associated endonuclease 9(CRISPR/Cas9) system was used to edit ISA1 gene in rice via Agrobacterium-mediated transformation. We identified 36 genetic edited lines from 55 T_0 transgenic events, and classified the mutation forms into 7 types. Of those, two homozygous mutants, cr-isa1-1(type 1, with an adenine insertion) and cr-isa1-2(type 3, with a cytosine deletion) were selected for further analysis. Seed sizes of both cr-isa1-1 and cr-isa1-2 were affected, and the two mutants also displayed a shrunken endosperm with significantly lower grain weight. Electron microscopy analysis showed that abnormal starch granules and amyloplasts were found in cr-isa1-1 and cr-isa1-2 endosperm cells. The contents of total starch, amylose and amylopectin in the endosperm of the cr-isa1 mutants were significantly reduced, whereas sugar content and starch gel consistency were observably increased compared to the wild-type. The gelatinization temperature and starch chain length distributions of the cr-isa1 mutants were also altered. Moreover, transcript levels of most starch synthesis-related genes were significantly lower in cr-isa1 mutants. In conclusion, the results indicated that gene edition of ISA1 affected starch synthesis and endosperm development, and brought potential implications for rice quality breeding.展开更多
Rice grain chalkiness is an important characteristic,but the difference between chalky and translucent parts in grains is still unclear.Here,we investigated the differences of flour made from the chalky or translucent...Rice grain chalkiness is an important characteristic,but the difference between chalky and translucent parts in grains is still unclear.Here,we investigated the differences of flour made from the chalky or translucent part of rice grains in three indica and three japonica rice varieties.The chalky flour had significantly lower amylose and protein contents and looser starch granule morphology,and starches in the chalky flour had higher relative crystallinity,higher short chain content but lower long chain content than those in the translucent flour.The water states,determined with nuclear magnetic resonance,differed between the chalky and translucent flour after soaking,cooking and retrograding,and the chalky flour had more bound and free water but less constructural water than the translucent flour.Mostly,the chalky flour had lower viscosity and shorter gel consistency,but higher onset temperature and gelatinization enthalpy than the translucent flour.The results indicated that starch granule morphology would be more indicative than other attributions on pasting and gelatinization properties of chalky and translucent parts of rice grains.展开更多
Amylose content(AC)is the key determinant of eating and cooking quality(ECQ)of rice.The major Wxa allele of granule-bound starch synthase I(GBSS I)in indica rice produces higher AC,making rice hard and dry after cooki...Amylose content(AC)is the key determinant of eating and cooking quality(ECQ)of rice.The major Wxa allele of granule-bound starch synthase I(GBSS I)in indica rice produces higher AC,making rice hard and dry after cooking.Recent work has improved ECQ of japonica rice via clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9(CRISPR/Cas9)or cytosine base editing(CBE)techniques.展开更多
NRL3 is essential for the growth and development of rice leaves.In this study,we found that the loss function of NRL3 also delayed heading date under natural long daylight and short daylight conditions.The yeast two-h...NRL3 is essential for the growth and development of rice leaves.In this study,we found that the loss function of NRL3 also delayed heading date under natural long daylight and short daylight conditions.The yeast two-hybrid and the bimolecular fluorescence complementation proved that NRL3interacts with OsK4,a Snf1-related kinase.OsK4 localized to the nucleus and expressed in various rice tissues.The rhythmic expression pattern of Os K4 was similar to NRL3 under long daylight and short daylight conditions.Knock-out mutants of Os K4 exhibited early heading under long daylight conditions,indicating that it acts as a negative regulator of heading date in rice.Interestingly,the OsK4 mutant under the nrl3 mutant background rescued the late heading phenotype of nrl3 under long daylight conditions,suggesting that Os K4 functions downstream of NRL3.Moreover,both NRL3 and Os K4 controlled heading date through regulating the expression of Hd3a and RFT1 genes.These findings shed light on the heading date regulation in rice and provide a sound theoretical base to improve regional adaptability of rice.展开更多
基金supported by the National Natural Science Foundation of China(Grant No.32101763)China National Postdoctoral Program for Innovative Talents(Grant No.BX2021266)China Postdoctoral Science Foundation(Grant No.2021M692853).
文摘As the‘Green Revolution’gene,SD1(encoding GA20ox2),has been widely applied to improve yield in rice breeding.However,research on its transcriptional regulation is limited.Here,we identified a transcription factor OsbZIP01,which can suppress the expression of SD1 and regulate gibberellin(GA)biosynthesis in rice.Knockout mutants of OsbZIP01 exhibited increased plant height,while the overexpression lines showed a semi-dwarf phenotype and diminished germination rate.Furthermore,the semi-dwarf phenotype of OE-bZIP01,was caused by the reduced internode length,which was accompanied by a thin stem width.The predominant expression of OsbZIP01 was observed in leaves and sheaths.OsbZIP01 protein was localized in the nucleus and showed transcriptional repression activity.In addition,OsbZIP01 could directly bind to the promoter of the OsSD1 gene,and inhibit its transcription.The semi-dwarf phenotype of OE-bZIP01 could be rescued by exogenous GA_(3).Meanwhile,the bzip01 sd1 double mutant showed a shorter shoot length compared with the wild type,indicating that OsbZIP01 regulated plant growth mainly through the GA biosynthesis pathway.Collectively,OsbZIP01 negatively regulates GA biosynthesis by restraining SD1 transcription,thereby affecting plant growth and development.
文摘【目的】根据灌浆期水稻内源激素水平解析稻穗不同部位籽粒产量性状的差异。【方法】以相同环境下种植的嘉58等6个浙江省常规粳稻品种为实验材料,将稻穗籽粒按一次枝梗在主穗上的节点划分为稻穗上部、中部和下部籽粒,测定了不同部位籽粒水杨酸(SA)、脱落酸(ABA)、吲哚乙酸(IAA)和生物量的动态变化及收获后籽粒千粒重、整精米率、长宽比、胶稠度和碱消值等相关性状。【结果】籽粒在灌浆期内0~35 d处于持续增重状态,且表现为上部>中部>下部,花后35 d各品种不同部位籽粒生物量的变异系数为1.66%~10.26%,35 d以后不同部位籽粒生物量的差距逐渐缩小但仍有差异,籽粒成熟后千粒重仍表现为上部籽粒(25.08~33.88g)>中部(24.04~32.49 g)>下部(23.46~31.78 g);不同部位间籽粒整精米率与长宽比略有差异,且千粒重与长宽比呈极显著正相关(r=0.89, P<0.01),与整精米率呈极显著负相关(r=-0.68, P<0.01);在胶稠度、碱消值方面,品种间的差异显著大于部位间的差异;三种内源激素在不同部位籽粒中的差异均较为显著,且SA差异最为稳定,全周期不同部位间籽粒SA含量变异系数为0.59%~25.90%,ABA和IAA变异系数依次为1.35%~66.25%和0.16%~81.04%。不同部位SA含量在灌浆初期与末期正相反,前期表现为上部籽粒>中部>下部,末期却表现为下部籽粒>中部>上部。【结论】不同部位籽粒的内源激素及产量等相关性状差异均较为显著,激素含量差异以SA最为稳定。SA与ABA和IAA分别呈显著正相关(r=0.54, P <0.05)和极显著正相关(r=0.59, P<0.01),与千粒重呈显著负相关(r=-0.53, P <0.05),其与长宽比和整精米率也分别为极显著负相关(r=-0.66, P <0.01)和极显著正相关(r=0.95, P <0.01)。
基金supported by the National Nature Science Foundation of China (Grant Nos. 31471472 and 31521064)the National S&T Major Project of China (Grant No. 2016ZX08001006)the Central Level, Non-Profit, Scientific Research Institutes Basic R and D Operations Special Fund (Grant Nos.Y2017PT46 and 2017RG002-1)
文摘Isoamylase 1(ISA1) is an isoamylase-type debranching enzyme which plays a predominant role in amylopectin synthesis. In this study, the clustered regularly interspaced short palindromic repeats(CRISPR)/CRISPR-associated endonuclease 9(CRISPR/Cas9) system was used to edit ISA1 gene in rice via Agrobacterium-mediated transformation. We identified 36 genetic edited lines from 55 T_0 transgenic events, and classified the mutation forms into 7 types. Of those, two homozygous mutants, cr-isa1-1(type 1, with an adenine insertion) and cr-isa1-2(type 3, with a cytosine deletion) were selected for further analysis. Seed sizes of both cr-isa1-1 and cr-isa1-2 were affected, and the two mutants also displayed a shrunken endosperm with significantly lower grain weight. Electron microscopy analysis showed that abnormal starch granules and amyloplasts were found in cr-isa1-1 and cr-isa1-2 endosperm cells. The contents of total starch, amylose and amylopectin in the endosperm of the cr-isa1 mutants were significantly reduced, whereas sugar content and starch gel consistency were observably increased compared to the wild-type. The gelatinization temperature and starch chain length distributions of the cr-isa1 mutants were also altered. Moreover, transcript levels of most starch synthesis-related genes were significantly lower in cr-isa1 mutants. In conclusion, the results indicated that gene edition of ISA1 affected starch synthesis and endosperm development, and brought potential implications for rice quality breeding.
基金supported by the National Natural Science Foundation of China (Grant Nos. 32172080 and 31971925)China Agriculture Research System (Grant No. CARS-01-16)
文摘Rice grain chalkiness is an important characteristic,but the difference between chalky and translucent parts in grains is still unclear.Here,we investigated the differences of flour made from the chalky or translucent part of rice grains in three indica and three japonica rice varieties.The chalky flour had significantly lower amylose and protein contents and looser starch granule morphology,and starches in the chalky flour had higher relative crystallinity,higher short chain content but lower long chain content than those in the translucent flour.The water states,determined with nuclear magnetic resonance,differed between the chalky and translucent flour after soaking,cooking and retrograding,and the chalky flour had more bound and free water but less constructural water than the translucent flour.Mostly,the chalky flour had lower viscosity and shorter gel consistency,but higher onset temperature and gelatinization enthalpy than the translucent flour.The results indicated that starch granule morphology would be more indicative than other attributions on pasting and gelatinization properties of chalky and translucent parts of rice grains.
基金supported by the China National Key Research and Development Program(Grant No.2020YFE0202300)the Central Public-Interest Scientific Institution Basal Research Fund of China(Grant No&Y2020PT07 and Y2020YJ09)the International Science&Technology Innovation Program of Chinese Academy of Agricultural Sciences,China(Grant No.CAAS-ZDRW202109).
文摘Amylose content(AC)is the key determinant of eating and cooking quality(ECQ)of rice.The major Wxa allele of granule-bound starch synthase I(GBSS I)in indica rice produces higher AC,making rice hard and dry after cooking.Recent work has improved ECQ of japonica rice via clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9(CRISPR/Cas9)or cytosine base editing(CBE)techniques.
基金supported by the China National Natural Science Foundation(Grant No.31871597)the Key Research and Development Program of Zhejiang Province,China(Grant No.2021C02063-2)+2 种基金the Key Research and Development Program of China National Rice Research Institute(Grant No.CNRRI-2020-02)the Science and Technology Project of Jiangxi Provincial Department of Education,China(Grant No.GJJ180217)the Project supported by Jiangxi Youth Science Foundation,China(Grant No.20202BAB215001)。
文摘NRL3 is essential for the growth and development of rice leaves.In this study,we found that the loss function of NRL3 also delayed heading date under natural long daylight and short daylight conditions.The yeast two-hybrid and the bimolecular fluorescence complementation proved that NRL3interacts with OsK4,a Snf1-related kinase.OsK4 localized to the nucleus and expressed in various rice tissues.The rhythmic expression pattern of Os K4 was similar to NRL3 under long daylight and short daylight conditions.Knock-out mutants of Os K4 exhibited early heading under long daylight conditions,indicating that it acts as a negative regulator of heading date in rice.Interestingly,the OsK4 mutant under the nrl3 mutant background rescued the late heading phenotype of nrl3 under long daylight conditions,suggesting that Os K4 functions downstream of NRL3.Moreover,both NRL3 and Os K4 controlled heading date through regulating the expression of Hd3a and RFT1 genes.These findings shed light on the heading date regulation in rice and provide a sound theoretical base to improve regional adaptability of rice.