Objective:We aimed to prospectively evaluate the association of oral microbiome with malignant esophageal lesions and its predictive potential as a biomarker of risk.Methods:We conducted a case-control study nested wi...Objective:We aimed to prospectively evaluate the association of oral microbiome with malignant esophageal lesions and its predictive potential as a biomarker of risk.Methods:We conducted a case-control study nested within a population-based cohort with up to 8 visits of oral swab collection for each subject over an 11-year period in a high-risk area for esophageal cancer in China.The oral microbiome was evaluated with 16 S ribosomal RNA(rRNA)gene sequencing in 428 pre-diagnostic oral specimens from 84 cases with esophageal lesions of severe squamous dysplasia and above(SDA)and 168 matched healthy controls.DESeq analysis was performed to identify taxa of differential abundance.Differential oral species together with subject characteristics were evaluated for their potential in predicting SDA risk by constructing conditional logistic regression models.Results:A total of 125 taxa including 37 named species showed significantly different abundance between SDA cases and controls(all P<0.05&false discovery rate-adjusted Q<0.10).A multivariate logistic model including 11 SDA lesion-related species and family history of esophageal cancer provided an area under the receiver operating characteristic curve(AUC)of 0.89(95%CI,0.84-0.93).Cross-validation and sensitivity analysis,excluding cases diagnosed within 1 year of collection of the baseline specimen and their matched controls,or restriction to screenendoscopic-detected or clinically diagnosed case-control triads,or using only bacterial data measured at the baseline,yielded AUCs>0.84.Conclusions:The oral microbiome may play an etiological and predictive role in esophageal cancer,and it holds promise as a non-invasive early warning biomarker for risk stratification for esophageal cancer screening programs.展开更多
For years, biochar has been successfully used for the remediation of polycyclic aromatic hydrocarbons(PAHs) in contaminated soils, not only for improving their removal from soil but also for reducing their uptake by c...For years, biochar has been successfully used for the remediation of polycyclic aromatic hydrocarbons(PAHs) in contaminated soils, not only for improving their removal from soil but also for reducing their uptake by crops. However, the underlying mechanism of biochar application reducing PAH uptake and accumulation in winter wheat remains unclear. Pot trials were conducted on a PAH-contaminated soil amended with bamboo biochar, coconut shell biochar,and maize straw biochar(MSB) for an entire growth period of winter wheat. Compared with no biochar control(CK), application of the three types of biochar significantly(P < 0.01) reduced grain PAH concentration, total equivalent concentration(TEC), and incremental lifetime cancer risk(ILCR), indicating that biochar application, especially MSB, reduced the risk of exposure to PAHs in wheat grain. Furthermore, all three types of biochar significantly(P < 0.05)reduced PAH uptake and accumulation in wheat roots and stems, probably because biochar application enhanced the degradation of PAHs in the rhizosphere soil. Compared with CK, application of the three types of biochar significantly(P < 0.05) reduced the concentration of PAHs in the rhizosphere soil by15.9%–33.7%. It was found that the degradation rate of high-molecular-weight(HMW) PAHs(5-and 6-ring PAHs) was significantly(P < 0.05) higher than that of low-molecular-weight(LMW) PAHs(2–4-ring PAHs) regardless of the type of biochar used. Additionally, all three types of biochar significantly increased the relative abundance of the dominant bacterial phyla and genera in soil. Redundancy and correlation analyses also showed that there was a strong correlation between the removal rate of PAHs and dominant bacteria in the rhizosphere soil. This study indicated that biochar effectively reduced the health risk from dietary exposure to PAHs in wheat grains by increasing the abundance of bacteria related to PAH degradation, promoting the biodegradation of PAHs in the rhizosphere soil, and consequently reducing PAH uptake by wheat.展开更多
基金the National Natural Science Foundation of China(No.30930102,82073626,81502855,81773501)the National Key R&D program of China(No.2016YFC0901404)+4 种基金the National Special Programme of Scientific and Technological Resources Investigation(No.2019FY101102)the Digestive Medical Coordinated Development Center of Beijing Hospitals Authority(No.XXZ0204)the Beijing Natural Science Foundation(No.7182033)the Beijing Municipal Administration of Hospital’s Youth Programme(No.QML20171101)the Science Foundation of Peking University Cancer Hospital(No.2020-7)。
文摘Objective:We aimed to prospectively evaluate the association of oral microbiome with malignant esophageal lesions and its predictive potential as a biomarker of risk.Methods:We conducted a case-control study nested within a population-based cohort with up to 8 visits of oral swab collection for each subject over an 11-year period in a high-risk area for esophageal cancer in China.The oral microbiome was evaluated with 16 S ribosomal RNA(rRNA)gene sequencing in 428 pre-diagnostic oral specimens from 84 cases with esophageal lesions of severe squamous dysplasia and above(SDA)and 168 matched healthy controls.DESeq analysis was performed to identify taxa of differential abundance.Differential oral species together with subject characteristics were evaluated for their potential in predicting SDA risk by constructing conditional logistic regression models.Results:A total of 125 taxa including 37 named species showed significantly different abundance between SDA cases and controls(all P<0.05&false discovery rate-adjusted Q<0.10).A multivariate logistic model including 11 SDA lesion-related species and family history of esophageal cancer provided an area under the receiver operating characteristic curve(AUC)of 0.89(95%CI,0.84-0.93).Cross-validation and sensitivity analysis,excluding cases diagnosed within 1 year of collection of the baseline specimen and their matched controls,or restriction to screenendoscopic-detected or clinically diagnosed case-control triads,or using only bacterial data measured at the baseline,yielded AUCs>0.84.Conclusions:The oral microbiome may play an etiological and predictive role in esophageal cancer,and it holds promise as a non-invasive early warning biomarker for risk stratification for esophageal cancer screening programs.
基金financially supported by the National Natural Science Foundation of China (Nos. 42077325 and 41571456)the Natural Science Basic Research Plan in Shaanxi Province of China (No. 2019JZ-25)。
文摘For years, biochar has been successfully used for the remediation of polycyclic aromatic hydrocarbons(PAHs) in contaminated soils, not only for improving their removal from soil but also for reducing their uptake by crops. However, the underlying mechanism of biochar application reducing PAH uptake and accumulation in winter wheat remains unclear. Pot trials were conducted on a PAH-contaminated soil amended with bamboo biochar, coconut shell biochar,and maize straw biochar(MSB) for an entire growth period of winter wheat. Compared with no biochar control(CK), application of the three types of biochar significantly(P < 0.01) reduced grain PAH concentration, total equivalent concentration(TEC), and incremental lifetime cancer risk(ILCR), indicating that biochar application, especially MSB, reduced the risk of exposure to PAHs in wheat grain. Furthermore, all three types of biochar significantly(P < 0.05)reduced PAH uptake and accumulation in wheat roots and stems, probably because biochar application enhanced the degradation of PAHs in the rhizosphere soil. Compared with CK, application of the three types of biochar significantly(P < 0.05) reduced the concentration of PAHs in the rhizosphere soil by15.9%–33.7%. It was found that the degradation rate of high-molecular-weight(HMW) PAHs(5-and 6-ring PAHs) was significantly(P < 0.05) higher than that of low-molecular-weight(LMW) PAHs(2–4-ring PAHs) regardless of the type of biochar used. Additionally, all three types of biochar significantly increased the relative abundance of the dominant bacterial phyla and genera in soil. Redundancy and correlation analyses also showed that there was a strong correlation between the removal rate of PAHs and dominant bacteria in the rhizosphere soil. This study indicated that biochar effectively reduced the health risk from dietary exposure to PAHs in wheat grains by increasing the abundance of bacteria related to PAH degradation, promoting the biodegradation of PAHs in the rhizosphere soil, and consequently reducing PAH uptake by wheat.