Many fungi are pathogenic on plants and cause significant damage in agriculture and forestry.They are also part of the natural ecosystem and may play a role in regulating plant numbers/density.Morphological identifica...Many fungi are pathogenic on plants and cause significant damage in agriculture and forestry.They are also part of the natural ecosystem and may play a role in regulating plant numbers/density.Morphological identification and analysis of plant pathogenic fungi,while important,is often hampered by the scarcity of discriminatory taxonomic characters and the endophytic or inconspicuous nature of these fungi.Molecular(DNA sequence)data for plant pathogenic fungi have emerged as key information for diagnostic and classification studies,although hampered in part by non-standard laboratory practices and analytical methods.To facilitate current and future research,this study provides phylogenetic synopses for 25 groups of plant pathogenic fungi in the Ascomycota,Basidiomycota,Mucormycotina(Fungi),and Oomycota,using recent molecular data,up-to-date names,and the latest taxonomic insights.Lineagespecific laboratory protocols together with advice on their application,as well as general observations,are also provided.We hope to maintain updated backbone trees of these fungal lineages over time and to publish them jointly as new data emerge.Researchers of plant pathogenic fungi not covered by the present study are invited to join this future effort.Bipolaris,Botryosphaeriaceae,Botryosphaeria,Botrytis,Choanephora,Colletotrichum,Curvularia,Diaporthe,Diplodia,Dothiorella,Fusarium,Gilbertella,Lasiodiplodia,Mucor,Neofusicoccum,Pestalotiopsis,Phyllosticta,Phytophthora,Puccinia,Pyrenophora,Pythium,Rhizopus,Stagonosporopsis,Ustilago and Verticillium are dealt with in this paper.展开更多
Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi characterized mainly by perithecial ascomata and inoperculate unitunicate asci.The class includes many importa...Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi characterized mainly by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,coprophilous and fungicolous,lichenized or lichenicolous taxa.They occur in terrestrial,freshwater and marine habitats worldwide.This paper reviews the 107 families of the class Sordariomycetes and provides a modified backbone tree based on phylogenetic analysis of four combined loci,with a maximum five representative taxa from each family,where available.This paper brings together for the first time,since Barrs’1990 Prodromus,descriptions,notes on the history,and plates or illustrations of type or representative taxa of each family,a list of accepted genera,including asexual genera and a key to these taxa of Sordariomycetes.Delineation of taxa is supported where possible by molecular data.The outline is based on literature to the end of 2015 and the Sordariomycetes now comprises six subclasses,32 orders,105 families and 1331 genera.The family Obryzaceae and Pleurotremataceae are excluded from the class.展开更多
Grapevine anthracnose is an important disease,responsible for mild to severe yield losses in grape production,and is also an important post harvest disease.The disease was studied in vineyards in six provinces in Chin...Grapevine anthracnose is an important disease,responsible for mild to severe yield losses in grape production,and is also an important post harvest disease.The disease was studied in vineyards in six provinces in China,with 34 isolates obtained from diseased grapes.Multi-gene(ACT,ITS,GAPDH,TUB2 and CHS)analysis coupled with morphology showed that Colletotrichum aenigma,C.hebeiense sp.nov.and C.viniferum were associated with grapevine anthracnose in China.Colletotrichum aenigma is reported for the first time as associated with grapevine anthracnose.Colletotrichum hebeiense is a new species introduced here.Pathogenicity testing showed that all species can infect grapes,causing anthracnose however,virulence of species and isolates showed great variation.Phylogenetic analysis showed that C.viniferum is a cryptic species and its taxonomy needs to be resolved in the future.展开更多
Sordariomycetes is one of the largest classes of Ascomycota and is characterised by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprob...Sordariomycetes is one of the largest classes of Ascomycota and is characterised by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,and fungicolous,lichenized or lichenicolous taxa.The class includes freshwater,marine and terrestrial taxa and has a worldwide distribution.This paper provides an updated outline of the Sordariomycetes and a backbone tree incorporating asexual and sexual genera in the class.Based on phylogeny and morphology we introduced three subclasses;Diaporthomycetidae,Lulworthiomycetidae and Meliolomycetidae and five orders;Amplistromatales,Annulatascales,Falcocladiales,Jobellisiales and Togniniales.The outline is based on literature to the end of 2014 and the backbone tree published in this paper.Notes for 397 taxa with information,such as new family and genera novelties,novel molecular data published since the Outline of Ascomycota 2009,and new links between sexual and asexual genera and thus synonymies,are provided.The Sordariomycetes now comprises six subclasses,28 orders,90 families and 1344 genera.In addition a list of 829 genera with uncertain placement in Sordariomycetesis also provided.展开更多
This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study incl...This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study include 12 new genera,74 new species,three new combinations,two reference specimens,a re-circumscription of the epitype,and 15 records of sexualasexual morph connections,new hosts and new geographical distributions.Twelve new genera comprise Brunneofusispora,Brunneomurispora,Liua,Lonicericola,Neoeutypella,Paratrimmatostroma,Parazalerion,Proliferophorum,Pseudoastrosphaeriellopsis,Septomelanconiella,Velebitea and Vicosamyces.Seventy-four new species are Agaricus memnonius,A.langensis,Aleurodiscus patagonicus,Amanita flavoalba,A.subtropicana,Amphisphaeria mangrovei,Baorangia major,Bartalinia kunmingensis,Brunneofusispora sinensis,Brunneomurispora lonicerae,Capronia camelliaeyunnanensis,Clavulina thindii,Coniochaeta simbalensis,Conlarium thailandense,Coprinus trigonosporus,Liua muriformis,Cyphellophora filicis,Cytospora ulmicola,Dacrymyces invisibilis,Dictyocheirospora metroxylonis,Distoseptispora thysanolaenae,Emericellopsis koreana,Galiicola baoshanensis,Hygrocybe lucida,Hypoxylon teeravasati,Hyweljonesia indica,Keissleriella caraganae,Lactarius olivaceopallidus,Lactifluus midnapurensis,Lembosia brigadeirensis,Leptosphaeria urticae,Lonicericola hyaloseptispora,Lophiotrema mucilaginosis,Marasmiellus bicoloripes,Marasmius indojasminodorus,Micropeltis phetchaburiensis,Mucor orantomantidis,Murilentithecium lonicerae,Neobambusicola brunnea,Neoeutypella baoshanensis,Neoroussoella heveae,Neosetophoma lonicerae,Ophiobolus malleolus,Parabambusicola thysanolaenae,Paratrimmatostroma kunmingensis,Parazalerion indica,Penicillium dokdoense,Peroneutypa mangrovei,Phaeosphaeria cycadis,Phanerochaete australosanguinea,Plectosphaerella kunmingensis,Plenodomus artemisiae,P.lijiangensis,Proliferophorum thailandicum,Pseudoastrosphaeriellopsis kaveriana,Pseudohelicomyces menglunicus,Pseudoplagiostoma mangiferae,Robillarda mangiferae,Roussoella elaeicola,Russula choptae,R.uttarakhandia,Septomelanconiella thailandica,Spencermartinsia acericola,Sphaerellopsis isthmospora,Thozetella lithocarpi,Trechispora echinospora,Tremellochaete atlantica,Trichoderma koreanum,T.pinicola,T.rugulosum,Velebitea chrysotexta,Vicosamyces venturisporus,Wojnowiciella kunmingensis and Zopfiella indica.Three new combinations are Baorangia rufomaculata,Lanmaoa pallidorosea and Wojnowiciella rosicola.The reference specimens of Canalisporium kenyense and Tamsiniella labiosa are designated.The epitype of Sarcopeziza sicula is re-circumscribed based on cyto-and histochemical analyses.The sexual-asexual morph connection of Plenodomus sinensis is reported from ferns and Cirsium for the first time.In addition,the new host records and country records are Amanita altipes,A.melleialba,Amarenomyces dactylidis,Chaetosphaeria panamensis,Coniella vitis,Coprinopsis kubickae,Dothiorella sarmentorum,Leptobacillium leptobactrum var.calidus,Muyocopron lithocarpi,Neoroussoella solani,Periconia cortaderiae,Phragmocamarosporium hederae,Sphaerellopsis paraphysata and Sphaeropsis eucalypticola.展开更多
This is a continuation of a series focused on providing a stable platform for the taxonomy of phytopathogenic fungi and fungus-like organisms.This paper focuses on one family:Erysiphaceae and 24 phytopathogenic genera...This is a continuation of a series focused on providing a stable platform for the taxonomy of phytopathogenic fungi and fungus-like organisms.This paper focuses on one family:Erysiphaceae and 24 phytopathogenic genera:Armillaria,Barrio-psis,Cercospora,Cladosporium,Clinoconidium,Colletotrichum,Cylindrocladiella,Dothidotthia,,Fomitopsis,Ganoderma,Golovinomyces,Heterobasidium,Meliola,Mucor,Neoerysiphe,Nothophoma,Phellinus,Phytophthora,Pseudoseptoria,Pythium,Rhizopus,Stemphylium,Thyrostroma and Wojnowiciella.Each genus is provided with a taxonomic background,distribution,hosts,disease symptoms,and updated backbone trees.Species confirmed with pathogenicity studies are denoted when data are available.Six of the genera are updated from previous entries as many new species have been described.展开更多
The classification of subclass Xylariomycetidae is revisited with additional collections and phylogeny based on novel rDNA sequence data.Phylogenetic inferences are provided and are based on analysis of 115 sequence d...The classification of subclass Xylariomycetidae is revisited with additional collections and phylogeny based on novel rDNA sequence data.Phylogenetic inferences are provided and are based on analysis of 115 sequence data,including new data for 27 strains.An updated outline to the subclass is presented based on the phylogenies and comprises two orders,18 families and 222 genera.An account of each order,family and genus in the subclass is given.We accept the orders Amphisphaeriales and Xylariales based on morphological and phylogenetic evidence.Amphisphaeriales comprises Amphisphaeriaceae,Bartaliniaceae fam.nov.,Clypeosphaeriaceae,Discosiaceae fam.nov.,Pestalotiopsidaceae fam.nov.and Phlogicylindriaceae fam.nov.Xylariales comprises Apiosporaceae,Cainiaceae,Coniocessiaceae,Diatrypaceae,Graphostromataceae(doubtful),Hyponectriaceae,Iodosphaeriaceae,Lopadostomaceae fam.nov.,Melogrammataceae,Pseudomassariaceae fam.nov.,Vialaeaceae and Xylariaceae.The new genera and species introduced are Arthrinium hyphopodii,A.subglobosa,Cainia anthoxanthis,Ciferriascosea gen.nov.,C.fluctamurum,C.rectamurum,Discosia neofraxinea,D.pseudopleurochaeta,Hyalotiella rubi,Seimatosporium cornii,S.ficeae,S.vitis and Truncatella spartii.展开更多
This is a continuity of a series of taxonomic and phylogenetic papers on the fungi where materials were collected from many countries,examined and described.In addition to extensive morphological descriptions and appr...This is a continuity of a series of taxonomic and phylogenetic papers on the fungi where materials were collected from many countries,examined and described.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets to infer phylogenetic relationships and substantiate systematic positions of taxa within appropriate ranks.Wherever new species or combinations are proposed,we apply an integrative approach using morphological and molecular data as well as ecological features wherever applicable.Notes on 112 fungal taxa are compiled in this paper including Biatriosporaceae and Roussoellaceae,Didysimulans gen.nov.,81 new species,18 new host records and new country records,five reference specimens,two new combinations,and three sexual and asexual morph reports.The new species are Amanita cornelii,A.emodotrygon,Angustimassarina alni,A.arezzoensis,A.italica,A.lonicerae,A.premilcurensis,Ascochyta italica,A.rosae,Austroboletus appendiculatus,Barriopsis thailandica,Berkleasmium ariense,Calophoma petasitis,Camarosporium laburnicola,C.moricola,C.grisea,C.ossea,C.paraincrustata,Colletotrichum sambucicola,Coprinopsis cerkezii,Cytospora gelida,Dacrymyces chiangraiensis,Didysimulans italica,D.mezzanensis,Entodesmium italica,Entoloma magnum,Evlachovaea indica,Exophiala italica,Favolus gracilisporus,Femsjonia monospora,Fomitopsis flabellata,F.roseoalba,Gongronella brasiliensis,Helvella crispoides,Hermatomyces chiangmaiensis,H.chromolaenae,Hysterium centramurum,Inflatispora caryotae,Inocybe brunneosquamulosa,I.luteobrunnea,I.rubrobrunnea,Keissleriella cirsii,Lepiota cylindrocystidia,L.flavocarpa,L.maerimensis,Lophiotrema guttulata,Marasmius luculentus,Morenoina calamicola,Moelleriella thanathonensis,Mucor stercorarius,Myrmecridium fluviae,Myrothecium septentrionale,Neosetophoma garethjonesii,Nigrograna cangshanensis,Nodulosphaeria guttulatum,N.multiseptata,N.sambuci,Panus subfasciatus,Paraleptosphaeria padi,Paraphaeosphaeria viciae,Parathyridaria robiniae,Penicillium punicae,Phaeosphaeria calamicola,Phaeosphaeriopsis yuccae,Pleurophoma italica,Polyporus brevibasidiosus,P.koreanus,P.orientivarius,P.parvovarius,P.subdictyopus,P.ulleungus,Pseudoasteromassaria spadicea,Rosellinia mearnsii,Rubroboletus demonensis,Russula yanheensis,Sigarispora muriformis,Sillia italica,Stagonosporopsis ailanthicola,Strobilomyces longistipitatus,Subplenodomus galicola and Wolfiporia pseudococos.The new combinations are Melanomma populina and Rubroboletus eastwoodiae.The reference specimens are Cookeina tricholoma,Gnomoniopsis sanguisorbae,Helvella costifera,Polythrincium trifolii and Russula virescens.The new host records and country records are Ascochyta medicaginicola,Boletellus emodensis,Cyptotrama asprata,Cytospora ceratosperma,Favolaschia auriscalpium,F.manipularis,Hysterobrevium mori,Lentinus sajor-caju,L.squarrosulus,L.velutinus,Leucocoprinus cretaceus,Lophiotrema vagabundum,Nothophoma quercina,Platystomum rosae,Pseudodidymosphaeria phlei,Tremella fuciformis,Truncatella spartii and Vaginatispora appendiculata and three sexual and asexual morphs are Aposphaeria corallinolutea, Dothiorabuxi and Hypocrella calendulina.展开更多
This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include ...This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include one new family(viz.Pseudoberkleasmiaceae in Dothideomycetes),five new genera(Caatingomyces,Cryptoschizotrema,Neoacladium,Paramassaria and Trochilispora)and 71 new species,(viz.Acrogenospora thailandica,Amniculicola aquatica,A.guttulata,Angustimassarina sylvatica,Blackwellomyces lateris,Boubovia gelatinosa,Buellia viridula,Caatingomyces brasiliensis,Calophoma humuli,Camarosporidiella mori,Canalisporium dehongense,Cantharellus brunneopallidus,C.griseotinctus,Castanediella meliponae,Coprinopsis psammophila,Cordyceps succavus,Cortinarius minusculus,C.subscotoides,Diaporthe italiana,D.rumicicola,Diatrypella delonicis,Dictyocheirospora aquadulcis,D.taiwanense,Digitodesmium chiangmaiense,Distoseptispora dehongensis,D.palmarum,Dothiorella styphnolobii,Ellisembia aurea,Falciformispora aquatic,Fomitiporia carpinea,F.lagerstroemiae,Grammothele aurantiaca,G.micropora,Hermatomyces bauhiniae,Jahnula queenslandica,Kamalomyces mangrovei,Lecidella yunnanensis,Micarea squamulosa,Muriphaeosphaeria angustifoliae,Neoacladium indicum,Neodidymelliopsis sambuci,Neosetophoma miscanthi,N.salicis,Nodulosphaeria aquilegiae,N.thalictri,Paramassaria samaneae,Penicillium circulare,P.geumsanense,P.mali-pumilae,P.psychrotrophicum,P.wandoense,Phaeoisaria siamensis,Phaeopoacea asparagicola,Phaeosphaeria penniseti,Plectocarpon galapagoense,Porina sorediata,Pseudoberkleasmium chiangmaiense,Pyrenochaetopsis sinensis,Rhizophydium koreanum,Russula prasina,Sporoschisma chiangraiense,Stigmatomyces chamaemyiae,S.cocksii,S.papei,S.tschirnhausii,S.vikhrevii,Thysanorea uniseptata,Torula breviconidiophora,T.polyseptata,Trochilispora schefflerae and Vaginatispora palmae).Further,twelve new combinations(viz.Cryptoschizotrema cryptotrema,Prolixandromyces australi,P.elongatus,P.falcatus,P.longispinae,P.microveliae,P.neoalardi,P.polhemorum,P.protuberans,P.pseudoveliae,P.tenuistipitis and P.umbonatus),an epitype is chosen for Cantharellus goossensiae,a reference specimen for Acrogenospora sphaerocephala and new synonym Prolixandromyces are designated.Twenty-four new records on new hosts and new geographical distributions are also reported(i.e.Acrostalagmus annulatus,Cantharellus goossensiae,Coprinopsis villosa,Dothiorella plurivora,Dothiorella rhamni,Dothiorella symphoricarposicola,Dictyocheirospora rotunda,Fasciatispora arengae,Grammothele brasiliensis,Lasiodiplodia iraniensis,Lembosia xyliae,Morenoina palmicola,Murispora cicognanii,Neodidymelliopsis farokhinejadii,Neolinocarpon rachidis,Nothophoma quercina,Peroneutypa scoparia,Pestalotiopsis aggestorum,Pilidium concavum,Plagiostoma salicellum,Protofenestella ulmi,Sarocladium kiliense,Tetraploa nagasakiensis and Vaginatispora armatispora).展开更多
t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e.conidiomata.Coelomycetes comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or saprobic.Tra...t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e.conidiomata.Coelomycetes comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or saprobic.Traditional classification of coelomycetes was previously based on morphology,such as the shape of conidiomata and mode of conidiogenesis,while it was treated as a distinct group i.e.Deuteromycotina.Sequence based taxonomic studies has been used to accommodate asexual fungi in a natural classification system,resolve generic boundaries of polyphyletic genera and species complexes,as well as establish asexual-sexual links.Nevertheless,most of genera lack sequence data,thus,morphology based identification is still important when introducing new genera or species.In this paper we illustrate,describe,and provide taxonomic notes for 235 dematiaceous coelomycetous genera,including five new genera viz.Apiculospora,Didymellocamarosporium,Melanocamarosporium,Melnikia and Paulkirkia.Phylogenetic analyses of combined sequence data are provided to show placements of dematiaceous coelomycetes in Dothideomycetes,Leotiomycetes and Sordariomycetes.One-hundred and fifty-two(65%)of genera have sequence data,thus,their taxonomic placement in a natural classification system,is listed as an outline.However,83 genera still lack sequence data,hence,they are treated as Ascomycota,genera incertae sedis.In addition,separate analyses are provided where better taxonomic resolution is needed.展开更多
Rating system Exceptional/brilliant Excellent Good Has merit Not worth reading Acanthamoeba:Biology and Pathogenesis(2nd edition)By Naveed Ahmed Khan The American Phytopathological Society Hardcover;334 pages;includin...Rating system Exceptional/brilliant Excellent Good Has merit Not worth reading Acanthamoeba:Biology and Pathogenesis(2nd edition)By Naveed Ahmed Khan The American Phytopathological Society Hardcover;334 pages;including 88 figures and 26 tables;ISBN:978-1-908230-50-8(hardcover)ISBN:978-1-908230-51-5(eBook)Acanthamoeba is an opportunistic protist pathogen,causing a blinding keratitis and fatal granulomatous encephalitis.Thus Acanthamoeba has gained increasing attention during the last few decades from the scientific communities,with cellular microbiology,environmental biology,physiology,cellular interactions,molecular biology,biochemistry and the evolutionary studies.展开更多
Fungi,as all other organisms need energy for their development and metabolic processes.They are very sensitive to and competitive for environmental resources.They assess their surroundings,both below and above ground ...Fungi,as all other organisms need energy for their development and metabolic processes.They are very sensitive to and competitive for environmental resources.They assess their surroundings,both below and above ground and estimate how much energy they need for particular tasks,then realize the optimum variant.They have the ability to control certain environmental resources.They perceive themselves and can distinguish between other organisms.They process and evaluate information from surroundings and then modify their behavior accordingly.展开更多
基金the Chinese Academy of Sciences,project number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botanythe National Research Council of Thailand(grant for Pestalotiopsis No:55201020008)+3 种基金Mae Fah Luang University(grant for Pestalotiopsis No:55101020004)for financial supportthe University of Malaya for grant number RU006H-2014 entitled“diversity and importance of fungal mangrove disease”Financial support to Julia Pawłowska and Marta Wrzosek was partially provided by the Polish Ministry of Science and Higher Education(MNiSW),grant no.NN303_548839financial support from FORMAS(215-2011-498).
文摘Many fungi are pathogenic on plants and cause significant damage in agriculture and forestry.They are also part of the natural ecosystem and may play a role in regulating plant numbers/density.Morphological identification and analysis of plant pathogenic fungi,while important,is often hampered by the scarcity of discriminatory taxonomic characters and the endophytic or inconspicuous nature of these fungi.Molecular(DNA sequence)data for plant pathogenic fungi have emerged as key information for diagnostic and classification studies,although hampered in part by non-standard laboratory practices and analytical methods.To facilitate current and future research,this study provides phylogenetic synopses for 25 groups of plant pathogenic fungi in the Ascomycota,Basidiomycota,Mucormycotina(Fungi),and Oomycota,using recent molecular data,up-to-date names,and the latest taxonomic insights.Lineagespecific laboratory protocols together with advice on their application,as well as general observations,are also provided.We hope to maintain updated backbone trees of these fungal lineages over time and to publish them jointly as new data emerge.Researchers of plant pathogenic fungi not covered by the present study are invited to join this future effort.Bipolaris,Botryosphaeriaceae,Botryosphaeria,Botrytis,Choanephora,Colletotrichum,Curvularia,Diaporthe,Diplodia,Dothiorella,Fusarium,Gilbertella,Lasiodiplodia,Mucor,Neofusicoccum,Pestalotiopsis,Phyllosticta,Phytophthora,Puccinia,Pyrenophora,Pythium,Rhizopus,Stagonosporopsis,Ustilago and Verticillium are dealt with in this paper.
基金the featured microbial resources and diversity investigation in Southwest Karst area(2014FY120100).The Biodiversity and Training Program(BRT R_251006,BRT R_351004,BRT_R352015)+3 种基金National Center for Genetic Engineering and Biotechnology(BIOTEC)Khlong Luang,Pathum Thani 12120,ThailandNational Natural Science Foundation of China(NSFC,No.30870009&31460011)the International Collaboration Plan of Guizhou Province(No.G[2012]7006)Ka-Lai Pang thanks the Ministry of Science and Technology,Taiwan(grant no.101-2621-B-019-001-MY3)for financial support.
文摘Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi characterized mainly by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,coprophilous and fungicolous,lichenized or lichenicolous taxa.They occur in terrestrial,freshwater and marine habitats worldwide.This paper reviews the 107 families of the class Sordariomycetes and provides a modified backbone tree based on phylogenetic analysis of four combined loci,with a maximum five representative taxa from each family,where available.This paper brings together for the first time,since Barrs’1990 Prodromus,descriptions,notes on the history,and plates or illustrations of type or representative taxa of each family,a list of accepted genera,including asexual genera and a key to these taxa of Sordariomycetes.Delineation of taxa is supported where possible by molecular data.The outline is based on literature to the end of 2015 and the Sordariomycetes now comprises six subclasses,32 orders,105 families and 1331 genera.The family Obryzaceae and Pleurotremataceae are excluded from the class.
基金The study is funded by CARS-30.There are many people to thank for their assistance with this work.The authors would like to thank Miss.Qin Tian for the help given to perform the pathogenicity tests and Miss.K.W.T.Chethana for the help given in phylogenetic analysis.Authors would like to thank the grape cultivators who provided the diseased fruits.K.D.Hyde thanks the National Research Council of Thailand,Colletotrichum grant number 54201020003 and The Chinese Academy of Sciences,project number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany.This work was also supported by a grant from the National Plan of Science and Technology,King Abdulaziz City of Science and Technology,Riyadh,Saudi Arabia(10-Bio-965-02).M.M.R.S.Jayawardena would like to thank H.A.Ariyawansa,D.Udayanga for the support given.
文摘Grapevine anthracnose is an important disease,responsible for mild to severe yield losses in grape production,and is also an important post harvest disease.The disease was studied in vineyards in six provinces in China,with 34 isolates obtained from diseased grapes.Multi-gene(ACT,ITS,GAPDH,TUB2 and CHS)analysis coupled with morphology showed that Colletotrichum aenigma,C.hebeiense sp.nov.and C.viniferum were associated with grapevine anthracnose in China.Colletotrichum aenigma is reported for the first time as associated with grapevine anthracnose.Colletotrichum hebeiense is a new species introduced here.Pathogenicity testing showed that all species can infect grapes,causing anthracnose however,virulence of species and isolates showed great variation.Phylogenetic analysis showed that C.viniferum is a cryptic species and its taxonomy needs to be resolved in the future.
基金This research was supported by Featured microbial resources and diversity investigation in Southwest Karst area(2014FY120100).The authors extend their sincere appreciations to the Deanship of Scientific Research at King Saud University for its funding this Prolific Research Group(PRG-1436-09).Kevin D.Hyde thanks the Chinese Academy of Sciences,project number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany.B.D.Shenoy acknowledges the funding to visit Mae Fah Luang University,Chiang Rai under Indo-Thailand Bilateral Programme(THAI-1205).Y.P.Xiao and T.C.Wen are grateful to The National Natural Science Foundation of China(No.31460012&No.31200016).Shi-Ke Huang and J.C.Kang are grateful to the Agricultural Science and Technology Foundation of Guizhou Province(Nos.NY[2013]3042),the International Collaboration Plan of Guizhou Province(No.G[2012]7006)and the Innovation Team Construction for Science And Technology of Guizhou Province(No.[2012]4007)from the Science and Technology Department of Guizhou Province,China.
文摘Sordariomycetes is one of the largest classes of Ascomycota and is characterised by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,and fungicolous,lichenized or lichenicolous taxa.The class includes freshwater,marine and terrestrial taxa and has a worldwide distribution.This paper provides an updated outline of the Sordariomycetes and a backbone tree incorporating asexual and sexual genera in the class.Based on phylogeny and morphology we introduced three subclasses;Diaporthomycetidae,Lulworthiomycetidae and Meliolomycetidae and five orders;Amplistromatales,Annulatascales,Falcocladiales,Jobellisiales and Togniniales.The outline is based on literature to the end of 2014 and the backbone tree published in this paper.Notes for 397 taxa with information,such as new family and genera novelties,novel molecular data published since the Outline of Ascomycota 2009,and new links between sexual and asexual genera and thus synonymies,are provided.The Sordariomycetes now comprises six subclasses,28 orders,90 families and 1344 genera.In addition a list of 829 genera with uncertain placement in Sordariomycetesis also provided.
基金CAS President’s International Fellowship Initiative(PIFI)for Young Staff 2019-2021(grant number 2019FY0003)the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)+45 种基金the Yunnan Provincial Department of Human Resources and Social Security(Grant No.Y836181261)National Science Foundation of China(NSFC)project code 31850410489 for financial research supportthe Foreign Experts Bureau of Yunnan Province,Foreign Talents Program(2018,Grant No.YNZ2018002)Thailand Research grants entitled Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans(Grant No:RSA5980068)the future of specialist fungi in a changing climate:baseline data for generalist and specialist fungi associated with ants,Rhododendron species and Dracaena species(Grant No:DBG6080013)Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion(Grant No:RDG6130001)the Key Research Program of Frontier Sciences of the Chinese Academy of Sciences(Grant No.QYZDY-SSW-SMC014)the National Science Foundation of China and the Chinese Academy of Sciences for financial support under the following grants:41761144055,41771063 and Y4ZK111B01the Fonds de la Recherche Scientifique-FNRS(Belgium)for travel grantsCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Grant No.2018PC0006)the National Science Foundation of China(NSFC,project code 31750110478)CAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Grant No.2019PC0008)supported under the Distinguished Scientist Fellowship Program(DSFP),King Saud University,Kingdom of Saudi Arabia.the Kerala State Council for Science,Technology and Environment(KSCSTE)in the form of a PhD fellowship(Grant No.001/FSHP/2011/CSTE)the Principal Chief Conservator of forests,Kerala State,for granting permission(No.WL10-4937/2012,dated 03-10-2013)to collect agarics from the forests of Keralathe Council of Scientific&Industrial Research(CSIR),New Delhi,India,in the form of an award of CSIR Research Associateship(09/043(0178)2K17 dated:31/03/2017)the National Natural Science Foundation of China(Project ID:31470152 and 31360014)the Foundation of Innovative Group of Edible Mushrooms Industry of Beijing(Project ID:BAIC05-2017)the 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province and the 64th batch of China Postdoctoral Science FoundationCNPq for the Ph.D scholarship of RLMA(140283/2016-1)Pos-Graduacao em Biologia de Fungos(UFPE,Brazil)Capes(Capes-SIU 008/13)CNPq(PQ 307601/2015-3)FACEPE(APQ 0375-2.03/15)for funding the researchfinancial support from the Agreement ENDESA and San Ignacio de Huinay Foundations and Consejo Superior de Investigaciones Cientificas,CSIC(Projects No.2011HUIN10,2013CL0012,2014CL0011)the AECID(Agencia Espanola de Cooperacion Internacional para el Desarrollo)and Plan Nacional I+D+i project no.CGL2015-67459-Psupported by a Predoctoral Grant from the Ministerio de Economıa y Competitividad(Spain)(BES-2016-077793)Croatian Science Foundation for their partial support under the project HRZZ-IP-2018-01-1736(ForFungiDNA)supported by the Graduate Program for the Undiscovered Taxa of Koreathe Project on Survey and Discovery of Indigenous Fungal Species of Korea funded by NIBR and Project on Discovery of Fungi from Freshwater and Collection of Fungarium funded by NNIBR of the Ministry of Environment(MOE)in part carried out with the support of Cooperative Research Program for Agriculture Science and Technology Development(PJ013744)Rural Development Administration,and BK21 PLUS program funded by Ministry of Education,Republic of Koreathe CASTWAS for the PhD Fellowship.Sanjay K.Singh,Paras Nath Singh,Shiwali Rana and Frank Kwekucher Ackah thank Director,MACS,Agharkar Research Institute,Pune,India for providing facilities.Shiwali Rana and Frank Kwekucher Ackah thank UGC(Junior Research Fellowship)and DST,Govt.of India(CV Raman Fellowship for African Researchers),respectively.Gen-Nuo Wang,Huang Zhang,Wei Dong and Xian-Dong Yu thank the National Natural Science Foundation of China(Project ID:NSF 31500017).Bandarupalli Devadatha and V.Venkateswara Sarma thank The Ministry of Earth sciences,Govt.of India(Sanction order:MOES/36/OO1S/Extra/40/2014/PC-IV dt.14.1.2015)for a funding of the project,T,District Forest Office,Tiruvarur,Tamil Nadu and PCCF(Head of Forest Force),Chennai,Tamil Nadu Forest Department for providing permission to collect samples from Muthupet mangroves,and Department of Biotechnology,Pondicherry University is thanked for providing the facilities.Myung Soo Park,Seung-Yoon Oh and Young Woon Lim thank the Marine Bio Resource Bank Program of the Ministry of Ocean&Fisheries,Korea.Olinto Pereira thanks the CAPES,CNPq and FAPEMIG for financial support.Neven Matocˇec,Ivana Kusˇan and Margita Jadan express their gratitude to Livio Lorenzon,Enrico Bizio and Raffaella Trabucco(MCVE)for their kind help with loan of Sarcopeziza sicula type materialparts of their research were financed by Public Institutions Sjeverni Velebit National Park and Paklenica National Parkthe National Natural Science Foundation of China(No.NSFC 31760013,NSFC 31260087,NSFC 31460561)the Scientific Research Foundation of Yunnan Provincial Department of Education(2017ZZX186)utilization of endophytes and the Thousand Talents Plan,Youth Project of Yunnan Provincesthe National Natural Science Foundation of China(No.31760014)and the Science and Technology Foundation of Guizhou Province(No.[2017]5788)Thailand Research Fund(TRF)Grant No MRG6080089 for financial research supportThe Royal Golden Jubilee Ph.D.Program(PHD60K0147)under Thailand Research Fund,for financial research supports on project entitle"Fungi on limestone outcrops from southern Thailand to lower himalyas"the National Research Council of Thailand(Grant No.61215320023,61215320013)the Thailand Research Fund(Grant No.TRG6180001)for research financial supportthe Thailand Research Fund(RTA 5880006)Chiang Mai University for partially support this research workChina-Thailand Joint Lab on Microbial Biotechnology(Most KY201701011)for financial supportthe Mushroom Research Foundation for research financial support and PhD Fellowships.
文摘This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study include 12 new genera,74 new species,three new combinations,two reference specimens,a re-circumscription of the epitype,and 15 records of sexualasexual morph connections,new hosts and new geographical distributions.Twelve new genera comprise Brunneofusispora,Brunneomurispora,Liua,Lonicericola,Neoeutypella,Paratrimmatostroma,Parazalerion,Proliferophorum,Pseudoastrosphaeriellopsis,Septomelanconiella,Velebitea and Vicosamyces.Seventy-four new species are Agaricus memnonius,A.langensis,Aleurodiscus patagonicus,Amanita flavoalba,A.subtropicana,Amphisphaeria mangrovei,Baorangia major,Bartalinia kunmingensis,Brunneofusispora sinensis,Brunneomurispora lonicerae,Capronia camelliaeyunnanensis,Clavulina thindii,Coniochaeta simbalensis,Conlarium thailandense,Coprinus trigonosporus,Liua muriformis,Cyphellophora filicis,Cytospora ulmicola,Dacrymyces invisibilis,Dictyocheirospora metroxylonis,Distoseptispora thysanolaenae,Emericellopsis koreana,Galiicola baoshanensis,Hygrocybe lucida,Hypoxylon teeravasati,Hyweljonesia indica,Keissleriella caraganae,Lactarius olivaceopallidus,Lactifluus midnapurensis,Lembosia brigadeirensis,Leptosphaeria urticae,Lonicericola hyaloseptispora,Lophiotrema mucilaginosis,Marasmiellus bicoloripes,Marasmius indojasminodorus,Micropeltis phetchaburiensis,Mucor orantomantidis,Murilentithecium lonicerae,Neobambusicola brunnea,Neoeutypella baoshanensis,Neoroussoella heveae,Neosetophoma lonicerae,Ophiobolus malleolus,Parabambusicola thysanolaenae,Paratrimmatostroma kunmingensis,Parazalerion indica,Penicillium dokdoense,Peroneutypa mangrovei,Phaeosphaeria cycadis,Phanerochaete australosanguinea,Plectosphaerella kunmingensis,Plenodomus artemisiae,P.lijiangensis,Proliferophorum thailandicum,Pseudoastrosphaeriellopsis kaveriana,Pseudohelicomyces menglunicus,Pseudoplagiostoma mangiferae,Robillarda mangiferae,Roussoella elaeicola,Russula choptae,R.uttarakhandia,Septomelanconiella thailandica,Spencermartinsia acericola,Sphaerellopsis isthmospora,Thozetella lithocarpi,Trechispora echinospora,Tremellochaete atlantica,Trichoderma koreanum,T.pinicola,T.rugulosum,Velebitea chrysotexta,Vicosamyces venturisporus,Wojnowiciella kunmingensis and Zopfiella indica.Three new combinations are Baorangia rufomaculata,Lanmaoa pallidorosea and Wojnowiciella rosicola.The reference specimens of Canalisporium kenyense and Tamsiniella labiosa are designated.The epitype of Sarcopeziza sicula is re-circumscribed based on cyto-and histochemical analyses.The sexual-asexual morph connection of Plenodomus sinensis is reported from ferns and Cirsium for the first time.In addition,the new host records and country records are Amanita altipes,A.melleialba,Amarenomyces dactylidis,Chaetosphaeria panamensis,Coniella vitis,Coprinopsis kubickae,Dothiorella sarmentorum,Leptobacillium leptobactrum var.calidus,Muyocopron lithocarpi,Neoroussoella solani,Periconia cortaderiae,Phragmocamarosporium hederae,Sphaerellopsis paraphysata and Sphaeropsis eucalypticola.
基金National Natural Science Foundation of China(No.31972222,31560489)Program of Intro-ducing Talents of Discipline to Universities of China(111 Program,D20023)+3 种基金Talent project of Guizhou Science and Technology Coop-eration Platform([2017]5788-5 and[2019]5641)and Guizhou Sci-ence,Technology Department International Cooperation Basic project([2018]5806)Guizhou University cultivation project[2017]5788-33.Kevin D.Hyde would like to thank“the future of specialist fungi in a changing climate:baseline data for generalist and specialist fungi associated with ants,Rhododendron species and Dracaena species”(Grant No.DBG6080013),Thailand Research Fund(TRF)Grant no RDG6130001“Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion”.Work of Viktor Papp was supported by the Ministry for Innovation and Technology within the framework of the Higher Education Institutional Excellence Program(NKFIH-1159-6/2019)in the scope of plant breeding and plant protection research of Szent István University.Sinang Honsanan would like to thank the National Natural Science Foundation of China for supporting the Project no.31950410548.Our thanks are due to the Research and Researchers for Industries Grant(PHD57I0015)for financial support to Boontiya Chuankid.Napalai Chaiwan would like to thank the Royal Golden Jubilee PhD Program under Thailand Research Fund(RGJ)The scholarship no.PHD60K0147the 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province(Grant no.:Y934283261)the 64th batch of China Postdoctoral Science Foundation(Grant no.:Y913082271).
文摘This is a continuation of a series focused on providing a stable platform for the taxonomy of phytopathogenic fungi and fungus-like organisms.This paper focuses on one family:Erysiphaceae and 24 phytopathogenic genera:Armillaria,Barrio-psis,Cercospora,Cladosporium,Clinoconidium,Colletotrichum,Cylindrocladiella,Dothidotthia,,Fomitopsis,Ganoderma,Golovinomyces,Heterobasidium,Meliola,Mucor,Neoerysiphe,Nothophoma,Phellinus,Phytophthora,Pseudoseptoria,Pythium,Rhizopus,Stemphylium,Thyrostroma and Wojnowiciella.Each genus is provided with a taxonomic background,distribution,hosts,disease symptoms,and updated backbone trees.Species confirmed with pathogenicity studies are denoted when data are available.Six of the genera are updated from previous entries as many new species have been described.
基金S.Maharachchikumbura thanks the Featured microbial resources and diversity investigation in Southwest Karst area(2014FY120100)for funding.The authors extend their sincere appreciations to the Deanship of Scientific Research at King Saud University for its funding this Prolific Research Group(PRG-1436-09).Kevin D.Hyde thanks the Chinese Academy of Sciences,project number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany.Y.P.Xiao and T.C.Wen are grateful to The National Natural Science Foundation of China(No.31460012&No.31200016).Shi-Ke Huang and J.C.Kang are grateful to the Agricultural Science and Technology Foundation of Guizhou Province Nos.NY[2013]3042),the International Collaboration Plan of Guizhou Province(No.G[2012]7006)and the Innovation Team Construction for Science And Technology of Guizhou Province(No.[2012]4007)from the Science and Technology Department of Guizhou Province,China.
文摘The classification of subclass Xylariomycetidae is revisited with additional collections and phylogeny based on novel rDNA sequence data.Phylogenetic inferences are provided and are based on analysis of 115 sequence data,including new data for 27 strains.An updated outline to the subclass is presented based on the phylogenies and comprises two orders,18 families and 222 genera.An account of each order,family and genus in the subclass is given.We accept the orders Amphisphaeriales and Xylariales based on morphological and phylogenetic evidence.Amphisphaeriales comprises Amphisphaeriaceae,Bartaliniaceae fam.nov.,Clypeosphaeriaceae,Discosiaceae fam.nov.,Pestalotiopsidaceae fam.nov.and Phlogicylindriaceae fam.nov.Xylariales comprises Apiosporaceae,Cainiaceae,Coniocessiaceae,Diatrypaceae,Graphostromataceae(doubtful),Hyponectriaceae,Iodosphaeriaceae,Lopadostomaceae fam.nov.,Melogrammataceae,Pseudomassariaceae fam.nov.,Vialaeaceae and Xylariaceae.The new genera and species introduced are Arthrinium hyphopodii,A.subglobosa,Cainia anthoxanthis,Ciferriascosea gen.nov.,C.fluctamurum,C.rectamurum,Discosia neofraxinea,D.pseudopleurochaeta,Hyalotiella rubi,Seimatosporium cornii,S.ficeae,S.vitis and Truncatella spartii.
基金Saowaluck Tibpromma would like to thank the Molecular Biology Experimental Center at Kunming Institute of Botany for facilities for molecular work,the Mushroom Research Foundation(MRF)Chiang Rai,Thailand for the financial support of her study and Shaun Pennycook is thanked for nomenclatural advice.K.D.Hyde would like to thank the Thailand Research Fund Grant No.RSA5980068 entitled“Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans”+21 种基金the Chinese Academy of Sciences,Project Number 2013T2S0030for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany and National Research Council of Thailand(Mae Fah Luang University)for a grants“Biodiversity,phylogeny and role of fungal endophytes of Pandanaceae”(Grant No.:592010200112)“Diseases of mangrove trees and maintenance of good forestry practice”(Grant No.:60201000201)for supporting this study.S.C.Karunarathna,P.E.Mortimer and J.C.Xu would like to thank the World Agroforestry Centre,East and Central Asia OfficeKey Laboratory for Plant Diversity and Biogeography of East Asia,Kunming Institute of Botany,Chinese Academy of Sciencethe ChineseMinistry of Science and Technology,under the 12th 5-year National Key Technology Support Program(NKTSP)2013 BAB07B06 integration and comprehensive demonstration of key technologies on Green Phosphate-mountaion Construction and the CGIAR Research Program 6:Forest,Trees and Agroforestry for partial funding.The authors would like to extend their sincere appreciation to the Deanship of Scientific Research at King Saud University for funding this research group NO(RG-1436-025)Financial support by the German Academic Exchange Service(DAAD)and the Thai Royal Golden Ph.D.Jubilee-Industry program(RGJ)for a joint TRFDAAD PPP(2012-2014)academic exchange grant to K.D.Hyde and M.Stadler,and the RGJ for a personal grant to B.Thongbai(No.Ph.D/0138/2553 in 4.S.MF/53/A.3)is gratefully acknowledged.Chayanard Phukhamsakda(PHD/0020/2557)acknowledges the Royal Golden Jubilee Ph.D.Program under the Thailand Research Fund.Mingkwan Doilom acknowledges the Royal Golden Jubilee Ph.D.Program(PHD./0072/2553 in 4.S.M.F./53/A.2)under the Thailand Research Fund.Ausana Mapook is grateful to Research and Researchers for Industries(RRI)PHD57I0012.Rungtiwa Phookamsak expresses sincere appreciation to The CAS President’s International Fellowship for Postdoctoral Researchers(Project No.2017PB0072)Qi Zhao thanks the National Natural Science Foundation of China(No.31360015)the CAS/SAFEA International Partnership Program for Creative Research Teams,and the Knowledge Innovation Program of the Chinese Academy of Sciences(No.KSCX2-EW-Z-9 and KIB2016002).Andre´Luiz Cabral Monteiro de Azevedo Santiago,Carlos Alberto Fragoso de Souza,Diogo Xavier Lima,Rafael Jose´Vilela de Oliveira and Gladstone Alves da Silva would like to thank the Coordenac¸a˜o de Aperfeic¸oamento de Pessoal de Nı´vel Superior(Coordination for the Improvement of Higher Education Personnel)(CAPES)and the Fundac¸a˜o de Amparo a`Cieˆncia e Tecnologia do Estado de Pernambuco(Foundation for the support of Science and Technology of the state of Pernambuco)(FACEPE)for the postgraduate scholarships awarded to Diogo X.Lima and Carlos A.F.de Souza,respectively.We would also like to thank the Conselho Nacional de Desenvolvimento Cientı´fico e Tecnolo´gico(National Council for Scientific and Technological Development)(CNPq)and FACEPE for financial support through the projects:‘Mucoromycotina in upland forests in the semi-arid region of Pernambuco’(CNPq-458391/2014-0)‘Diversity of Mucoromycotina in different ecosystems of the Pernambuco Atlantic Rainforest’(FACEPE-APQ 0842-2.12/14).H.B.Lee was supported by the Graduate Program for the Undiscovered Taxa of Korea,and by the Project on Survey and Discovery of Indigenous Fungal Species of Korea funded by NIBR and Project on Discovery of Fungi from Freshwater and Collection of Fungarium funded by NNIBR of the Ministry of Environment(MOE)and in part by a fund from National Institute of Animal Science under Rural Development Administration,Republic of Korea.Z.L Luo and H.Y Su would like to thank the National Natural Science Foundation of China(Project ID:31460015)for financial support on Study of the distribution pattern and driving factors of aquatic fungal diversity in the region of Three Parallel Rivers.Saranyaphat Boonmee thanks the National Research Council of Thailand,project number 2560A30702021the Thailand Research Fund,project number TRG5880152 for providing financial support.C.G.Lin and Y.Wang thank the grant from the National Natural Science Foundation of China(No.NSFC 31560489)Fundamental Research on Science and Technology,Ministry of Science and Technology of China(2014FY120100)Mr.Jingzu Sun thank for the National Natural Science Foundations of China(No.31600024)Wei Dong thanks the for National Natural Science Foundation of China(Project ID:NSF 31500017 to Huang Zhang)P.N.Singh,A.Baghela,S.K.Singh,and S.Aamir thank the Director,MACS’Agharkar Research Institute,Pune,India for providing facilities and Rajendra Singh(Department of Zoology,DDU Gorakhpur University,UP,India)for identification of insect-host.Saisamorn Lumyong and Rene K.Schumacher are thanked for valuable suggestions and collecting specimens.K.N.A.Raj acknowledges support from the University Grants Commission(UGC)India,in the form of a Rajiv Gandhi National Fellowship(Grant No.F.14-2(SC)/2009(SA-III))K.N.A.Raj also acknowledges the permissions given to him for collecting agaric specimens from the forests of Kerala by the Principal Chief Conservator of Forests,Government of Kerala(WL12-4042/2009 dated 5 August 2009).K.P.D.Latha acknowledges the financial support from the Kerala State Council for Science,Technology and Environment(KSCSTE)in the form of a PhD fellowship(Grant No.001/FSHP/2011/CSTE)K.P.D.Latha also acknowledges the permission(No.WL10-4937/2012,dated 3-10-2013)given to her by the Principal Chief Conservator of Forests,Government of Kerala,to collect agaric specimens from the forests of Kerala.Zdenko Tkalcec has been partially supported by Croatian Science Foundation under the project HRZZ-IP-11-2013-2202(ACCTA)is grateful to Milan Cerkez for his great contribution to the study of coprinoid and coprophilous fungi in Croatia.Vladimir Antonı´n thank the Moravian Museum by the Ministry of Culture of the Czech Republic as part of its long-term conceptual development programme for research institutions(DKRVO,ref.MK000094862)T.C.Wen,Y.P.Xiao,C.Norphanphoun and K.K.Hapuarachchi are grateful to the National Natural Science Foundation of China(No.31460012)and the Science and Technology Foundation of Guizhou Province(No.[2016]2863)Y.W.Lim would like to thanks NIBR supporting the Project on Survey and Discovery of Indigenous Fungal Species of Korea.Kanad Das and Dyutiparna Chakraborty are thankful to the Director,Botanical Survey of India(BSI)and Scientist-in-Charge,BSI,Gangtok for providing facilities during this study.Sinchan Adhikari,Joydeep Karmakar and Tapas Kumar Bandyopadhyay would like to acknowledge DST-PURSE and DST-FIST for providing central instrumentation facilities and Alan JL Phillips acknowledges the Biosystems and Integrative Sciences Institute(BioISI,FCT/UID/Multi/04046/2013).
文摘This is a continuity of a series of taxonomic and phylogenetic papers on the fungi where materials were collected from many countries,examined and described.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets to infer phylogenetic relationships and substantiate systematic positions of taxa within appropriate ranks.Wherever new species or combinations are proposed,we apply an integrative approach using morphological and molecular data as well as ecological features wherever applicable.Notes on 112 fungal taxa are compiled in this paper including Biatriosporaceae and Roussoellaceae,Didysimulans gen.nov.,81 new species,18 new host records and new country records,five reference specimens,two new combinations,and three sexual and asexual morph reports.The new species are Amanita cornelii,A.emodotrygon,Angustimassarina alni,A.arezzoensis,A.italica,A.lonicerae,A.premilcurensis,Ascochyta italica,A.rosae,Austroboletus appendiculatus,Barriopsis thailandica,Berkleasmium ariense,Calophoma petasitis,Camarosporium laburnicola,C.moricola,C.grisea,C.ossea,C.paraincrustata,Colletotrichum sambucicola,Coprinopsis cerkezii,Cytospora gelida,Dacrymyces chiangraiensis,Didysimulans italica,D.mezzanensis,Entodesmium italica,Entoloma magnum,Evlachovaea indica,Exophiala italica,Favolus gracilisporus,Femsjonia monospora,Fomitopsis flabellata,F.roseoalba,Gongronella brasiliensis,Helvella crispoides,Hermatomyces chiangmaiensis,H.chromolaenae,Hysterium centramurum,Inflatispora caryotae,Inocybe brunneosquamulosa,I.luteobrunnea,I.rubrobrunnea,Keissleriella cirsii,Lepiota cylindrocystidia,L.flavocarpa,L.maerimensis,Lophiotrema guttulata,Marasmius luculentus,Morenoina calamicola,Moelleriella thanathonensis,Mucor stercorarius,Myrmecridium fluviae,Myrothecium septentrionale,Neosetophoma garethjonesii,Nigrograna cangshanensis,Nodulosphaeria guttulatum,N.multiseptata,N.sambuci,Panus subfasciatus,Paraleptosphaeria padi,Paraphaeosphaeria viciae,Parathyridaria robiniae,Penicillium punicae,Phaeosphaeria calamicola,Phaeosphaeriopsis yuccae,Pleurophoma italica,Polyporus brevibasidiosus,P.koreanus,P.orientivarius,P.parvovarius,P.subdictyopus,P.ulleungus,Pseudoasteromassaria spadicea,Rosellinia mearnsii,Rubroboletus demonensis,Russula yanheensis,Sigarispora muriformis,Sillia italica,Stagonosporopsis ailanthicola,Strobilomyces longistipitatus,Subplenodomus galicola and Wolfiporia pseudococos.The new combinations are Melanomma populina and Rubroboletus eastwoodiae.The reference specimens are Cookeina tricholoma,Gnomoniopsis sanguisorbae,Helvella costifera,Polythrincium trifolii and Russula virescens.The new host records and country records are Ascochyta medicaginicola,Boletellus emodensis,Cyptotrama asprata,Cytospora ceratosperma,Favolaschia auriscalpium,F.manipularis,Hysterobrevium mori,Lentinus sajor-caju,L.squarrosulus,L.velutinus,Leucocoprinus cretaceus,Lophiotrema vagabundum,Nothophoma quercina,Platystomum rosae,Pseudodidymosphaeria phlei,Tremella fuciformis,Truncatella spartii and Vaginatispora appendiculata and three sexual and asexual morphs are Aposphaeria corallinolutea, Dothiorabuxi and Hypocrella calendulina.
基金the Foreign Experts Bureau of Yunnan Province,Foreign Talents Program(2018,Grant No.YNZ2018002)Thailand Research grants entitled Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans(Grant No.RSA5980068)+60 种基金the future of specialist fungi in a changing climate:baseline data for generalist and specialist fungi associated with ants,Rhododendron species and Dracaena species(Grant No.DBG6080013)Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion(Grant No.RDG6130001)Chiang Mai University for the award of visiting ProfessorCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Grant No.2018PC0006)the National Science Foundation of China(NSFC,project code 31750110478)supported by the Graduate Program for the Undiscovered Taxa of Koreain part by the Project on Survey and Discovery of Indigenous Fungal Species of Korea funded by NIBR and Project on Discovery of Fungi from Freshwater and Collection of Fungarium funded by NNIBR of the Ministry of Environment(MOE)in part carried out with the support of Cooperative Research Program for Agriculture Science and Technology Development(PJ013744),Rural Development Administration,Republic of Koreain part supported by the BK21 plus program through the National Research Foundation(NRF)funded by the Ministry of Education of Korea.Jian-Kui Liu thanks the National Natural Science Foundation of China(NSFC 31600032)the CNPq(Conselho Nacional de Desenvolvimento Cientifico e Tecnologico)for a research grant(309058/2015-5)funding for collecting trips(401186/2014-8)a collaborative project with RL as Special Visiting Professor(314570/2014-4)Funding for phylogenetic work on Graphidaceae was provided by a grant from the National Science Foundation(NSF)to The Field Museum:DEB-1025861"ATM-Assembling a taxonomic monograph:The lichen family Graphidaceae"PI Thorsten Lumbsch,CoPI Robert Luckingthe CAPES,CNPq,and FAPEMIG for financial support and ICMBio/FLONA-Paraopeba for providing facilities and permits for the exploration surveys of the mycodiversity in their protected areasthe Graduate Program for the Biodiversity and Biotechnology Network of the Legal Amazon(UFPA-MPEG,Brazil)the Conselho Nacional de Desenvolvimento Cientifico Programa de Capacitacao for the scholarship to AMSS(Programa de Capacitacao Institucional 303073/2018-7)CNPq(Sisbiota 563342/2010-2,PROTAX 562106/2010-3)FACEPE(APQ 0788-2.03/12)for funding this researchsupport by a long-term research development project No.RVO 67985939 of the Czech Academy of Sciences,Institute of Botanyfinancial support from Conselho Nacional de Pesquisa e Desenvolvimento Cientifico(CNPq)National Natural Science Foundation of China(Project IDs GJL:31500013,RLZ:31470152 and 31360014)for financial supportjoint project of the Charles Darwin Foundation(CDF)and the Galapagos National Park(DPNG),part of a national biodiversity assessment"Biodiversidad Genetica del Ecuador"led by the Instituto Nacional de Biodiversidad del Ecuador(INABIO)Thailand Research Fund(TRF)Grant No.MRG6080089 entitledTaxonomy and phylogeny of foliar fungi from Mangrove and to Dr.Putarak Chomnuntithe Thailand Research Fund(No.TRG6180001)the National Research Council of Thailand(No.61215320023)Plant Genetic Conservation Project under the Royal Initiation of Her Royal Highness Princess Maha Chakri Sirindhorn-Mae Fah Luang Universitygrateful to Croatian Science Foundation for their financial support under the project HRZZ-IP-2018-01-1736(For-FungiDNA)the Royal Golden Jubilee PhD Program under Thailand Research Fund(RGJ)for a personal grant to C.Phukhamsakda(The scholarship no.PHD/0020/2557 to study towards a PhD)China-Thailand Joint Lab on Microbial Biotechnology(Most KY201701011)for financial supportCAS President’s International Fellowship Initiative(PIFI)for young staff(Grant No.2019FYC0003)the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)the Yunnan Provincial Department of Human Resources and Social Security(Grant No.Y836181261)National Science Foundation of China(NSFC)project code 31850410489 for financial supportthe National Research Council of Thailand(Grant No.256108A3070006)for financial supportthe National Natural Science Foundation of China(No.31760014)the Science and Technology Foundation of Guizhou Province(No.[2016]2863)partially supported by Chiang Mai Universitythe Graduate Program for the Biodiversity and Biotechnology Network of the Legal Amazon(UFPA-MPEG),the Museu Paraense Emilio Goeldi(MPEG),the Universidade do Estado do Amapa and the Universidade Federal de Pernambuco for the logistical support of their laboratories and herbariaCNPq for the scholarship of AMSS(Programa de Capacitacao Institucional 303073/2018-7)CNPq(Sisbiota 563342/2010-2,PROTAX 562106/2010-3)and FACEPE(APQ 0788-2.03/12)for funding this researchthe ATM of the Paris'Museum and"l'Institut Ecologie et Environnement"(CNRS-INEE)for funding the field trip with Shelly Masi to Africaall the practical help and sharing her experiencemade possible through research permit 034/MENESR/DIRCAB/DGESRSTI/DRSTSPI/SSSTI/16 from the"Ministere de l'education nationale,de l’enseignement superieur et de la recherche scientifique"of the Central African Republicfinanced in part by the National Geographic Society(grants 6365-98,7921-05)in more recent years by the ATM-project"Past and present biodiversity"of the Museum national d’histoire naturelle(Dirs.Ph.Janvier and S.Peigne)University of Mauritius for research supportthe Thailand Research Fund(PHD60K0147)contribution number 2248 of the Charles Darwin Foundation for the Galapagos IslandsLakmali Dissanayake and Binu Samarakoon for their supportCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Number 2019PC0008)the National Science Foundation of China and the Chinese Academy of Sciences for financial support under the following grants:41761144055,41771063 and Y4ZK111B01CAS President’s International Fellowship Initiative(Grant No.2018VBB0021)German Academic Exchange Service Fellowship(Grant No.57314018)Ministry of innovative development of the Republic of Uzbekistan(Projects No.P3-2014-0830174425 and PP-20170921183)for funding his research projectsthe 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province(Grant No.Y934283261)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913082271)their kind support on manuscript writing.Jianchu Xu thanks Key Research Program of Frontier Sciences"Response of Asian mountain ecosystems to global change",CAS(Grant No.QYZDYSSW-SMC014)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913083271)the support from UID/MULTI/04046/2019 Research Unit grant from FCT,Portugal to BioISI.
文摘This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include one new family(viz.Pseudoberkleasmiaceae in Dothideomycetes),five new genera(Caatingomyces,Cryptoschizotrema,Neoacladium,Paramassaria and Trochilispora)and 71 new species,(viz.Acrogenospora thailandica,Amniculicola aquatica,A.guttulata,Angustimassarina sylvatica,Blackwellomyces lateris,Boubovia gelatinosa,Buellia viridula,Caatingomyces brasiliensis,Calophoma humuli,Camarosporidiella mori,Canalisporium dehongense,Cantharellus brunneopallidus,C.griseotinctus,Castanediella meliponae,Coprinopsis psammophila,Cordyceps succavus,Cortinarius minusculus,C.subscotoides,Diaporthe italiana,D.rumicicola,Diatrypella delonicis,Dictyocheirospora aquadulcis,D.taiwanense,Digitodesmium chiangmaiense,Distoseptispora dehongensis,D.palmarum,Dothiorella styphnolobii,Ellisembia aurea,Falciformispora aquatic,Fomitiporia carpinea,F.lagerstroemiae,Grammothele aurantiaca,G.micropora,Hermatomyces bauhiniae,Jahnula queenslandica,Kamalomyces mangrovei,Lecidella yunnanensis,Micarea squamulosa,Muriphaeosphaeria angustifoliae,Neoacladium indicum,Neodidymelliopsis sambuci,Neosetophoma miscanthi,N.salicis,Nodulosphaeria aquilegiae,N.thalictri,Paramassaria samaneae,Penicillium circulare,P.geumsanense,P.mali-pumilae,P.psychrotrophicum,P.wandoense,Phaeoisaria siamensis,Phaeopoacea asparagicola,Phaeosphaeria penniseti,Plectocarpon galapagoense,Porina sorediata,Pseudoberkleasmium chiangmaiense,Pyrenochaetopsis sinensis,Rhizophydium koreanum,Russula prasina,Sporoschisma chiangraiense,Stigmatomyces chamaemyiae,S.cocksii,S.papei,S.tschirnhausii,S.vikhrevii,Thysanorea uniseptata,Torula breviconidiophora,T.polyseptata,Trochilispora schefflerae and Vaginatispora palmae).Further,twelve new combinations(viz.Cryptoschizotrema cryptotrema,Prolixandromyces australi,P.elongatus,P.falcatus,P.longispinae,P.microveliae,P.neoalardi,P.polhemorum,P.protuberans,P.pseudoveliae,P.tenuistipitis and P.umbonatus),an epitype is chosen for Cantharellus goossensiae,a reference specimen for Acrogenospora sphaerocephala and new synonym Prolixandromyces are designated.Twenty-four new records on new hosts and new geographical distributions are also reported(i.e.Acrostalagmus annulatus,Cantharellus goossensiae,Coprinopsis villosa,Dothiorella plurivora,Dothiorella rhamni,Dothiorella symphoricarposicola,Dictyocheirospora rotunda,Fasciatispora arengae,Grammothele brasiliensis,Lasiodiplodia iraniensis,Lembosia xyliae,Morenoina palmicola,Murispora cicognanii,Neodidymelliopsis farokhinejadii,Neolinocarpon rachidis,Nothophoma quercina,Peroneutypa scoparia,Pestalotiopsis aggestorum,Pilidium concavum,Plagiostoma salicellum,Protofenestella ulmi,Sarocladium kiliense,Tetraploa nagasakiensis and Vaginatispora armatispora).
基金the International Highly Cited Research Group(IHCRRGP#14-205)Nalin N.Wijayawardene would like to thank P.M.Kirk,V.A.Mel’nik,Buddhika Dilhan,Dmitrii Shabunin,Manjari Dissanayake and Lesley Ragab for being helpful to gather old literature.Kevin D.Hyde is grateful to the Chinese Academy of Sciences,project number 2013T2S0030+6 种基金for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany,research grant from the Biodiversity Research and Training Program(BRT R253012)The Thailand Research Fund(BRG 5280002).Alan J.L.Phillips thanks Mae Fah Luang University for a Visiting Professorship during the tenure of which this paper was finalised.Yong Wang would like to thank The International Scientific Cooperated Project of Guizhou Province(No[2013]7004).Rungtiwa Phookamsak thanks the Royal Golden Jubilee Ph.D.Program(PHD/0090/2551).Erio Camporesi is grateful to Giancarlo Lombardi,Sergio Montanari and Gigi Stagioni for their help in identifying host plants of fresh collections.K.Tanaka would like to thank the Japan Society for the Promotion of Science(JSPS,25440199 and 26291084)Hirosaki University Grant for Exploratory Research by Young Scientists and Newly-appointed Scientists for financial support.Yong Wang thanks Yong-Cheng Long,Prof.De-Gang Zhao and Prof.Zhuo Chen for their help in sequencing and suggestions in molecular experiments.We would like to thank MFU grant No.56101020032 for funding to study the taxonomy and phylogeny of Dothideomycetes.The authors also wish to acknowledge Saranyaphat Boonmee,Chayanard Phukhamsakda and Qing Tian.Ishani D.Goonasekara wishes to acknowledge Liu Ende,Assistant Curator,Herbarium,Kunming Institute of Botany,Chinese Academy of Sciences(KUN),Kunming,China,Wu HaiXia and staff of International Fungal Research and Development Centre(IFRD),Key Laboratory of Resource Insect Cultivation&Utilization State Forestry Administration,The Research Institute of Resource Insects,Chinese Academy of Forestry Kunming 650224,PR China and Danushka S.Tennakoon for their assistance with herbarium material.
文摘t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e.conidiomata.Coelomycetes comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or saprobic.Traditional classification of coelomycetes was previously based on morphology,such as the shape of conidiomata and mode of conidiogenesis,while it was treated as a distinct group i.e.Deuteromycotina.Sequence based taxonomic studies has been used to accommodate asexual fungi in a natural classification system,resolve generic boundaries of polyphyletic genera and species complexes,as well as establish asexual-sexual links.Nevertheless,most of genera lack sequence data,thus,morphology based identification is still important when introducing new genera or species.In this paper we illustrate,describe,and provide taxonomic notes for 235 dematiaceous coelomycetous genera,including five new genera viz.Apiculospora,Didymellocamarosporium,Melanocamarosporium,Melnikia and Paulkirkia.Phylogenetic analyses of combined sequence data are provided to show placements of dematiaceous coelomycetes in Dothideomycetes,Leotiomycetes and Sordariomycetes.One-hundred and fifty-two(65%)of genera have sequence data,thus,their taxonomic placement in a natural classification system,is listed as an outline.However,83 genera still lack sequence data,hence,they are treated as Ascomycota,genera incertae sedis.In addition,separate analyses are provided where better taxonomic resolution is needed.
文摘Rating system Exceptional/brilliant Excellent Good Has merit Not worth reading Acanthamoeba:Biology and Pathogenesis(2nd edition)By Naveed Ahmed Khan The American Phytopathological Society Hardcover;334 pages;including 88 figures and 26 tables;ISBN:978-1-908230-50-8(hardcover)ISBN:978-1-908230-51-5(eBook)Acanthamoeba is an opportunistic protist pathogen,causing a blinding keratitis and fatal granulomatous encephalitis.Thus Acanthamoeba has gained increasing attention during the last few decades from the scientific communities,with cellular microbiology,environmental biology,physiology,cellular interactions,molecular biology,biochemistry and the evolutionary studies.
文摘Fungi,as all other organisms need energy for their development and metabolic processes.They are very sensitive to and competitive for environmental resources.They assess their surroundings,both below and above ground and estimate how much energy they need for particular tasks,then realize the optimum variant.They have the ability to control certain environmental resources.They perceive themselves and can distinguish between other organisms.They process and evaluate information from surroundings and then modify their behavior accordingly.
