In this paper, a novel reconstruction method is presented for Near Infrared (NIR) 2-D imaging to recover optical absorption coefficients from laboratory phantom data. The main body of this work validates a new generat...In this paper, a novel reconstruction method is presented for Near Infrared (NIR) 2-D imaging to recover optical absorption coefficients from laboratory phantom data. The main body of this work validates a new generation of highly efficient reconstruction algorithms called “Globally Convergent Method” (GCM) based upon actual measurements taken from brain-shape phantoms. It has been demonstrated in earlier studies using computer-simulated data that this type of reconstructions is stable for imaging complex distributions of optical absorption. The results in this paper demonstrate the excellent capability of GCM in working with experimental data measured from optical phantoms mimicking a rat brain with stroke.展开更多
Background:Myopia is the most common visual impairment in children and adolescents worldwide.This study described an economical and effective population-based screening pipeline and performed the project of a million ...Background:Myopia is the most common visual impairment in children and adolescents worldwide.This study described an economical and effective population-based screening pipeline and performed the project of a million scale children and adolescents myopia survey(CAMS),which will shed light on the further study of myopia from the level of epidemiology and precision medicine.Methods:We developed a novel population-based screening pattern,an intelligent screening process and internetbased information transmission and analysis system to carry out the survey consisting of school children in Wenzhou,China.The examination items include unaided distance visual acuity,presenting distance visual acuity,and noncycloplegic autorefraction.Myopia and high myopia were defined as spherical equivalent(SE)≤−1.00 diopters(D)and SE≤−6.00 D,respectively.Next,the reports of the vision checking were automatically sent to parents and the related departments.The CAMS project will be done two to four times annually with the support of the government.An online eyesight status information management system(OESIMS)was developed to construct comprehensive and efficient electronic vision health records(EVHRs)for myopia information inquiry,risk pre-warning,and further study.Results:The CAMS completed the first-round of screening within 30 days for 99.41%of Wenzhou students from districts and counties,in June 2019.A total of 1,060,925 participants were eligible for CAMS and 1,054,251(99.37%participation rate)were selected through data quality control,which comprised 1305 schools,and 580,609,251,050 and 170,967 elementary,middle,and high school students.The mean age of participants was 12.21±3.32 years(6-20 years),the female-to-male ratio was 0.82.The prevalence of myopia in elementary,middle,and high school students was 38.16%,77.52%,and 84.00%,respectively,and the high myopia incidence was 0.95%,6.90%,and 12.98%.Conclusions:The CAMS standardized myopia screening model involves automating large-scale information collection,data transmission,data analysis and early warning,thereby supporting myopia prevention and control.The entire survey reduced 90%of staff,cost,and time consumption compared with previous surveys.This will provide new insights for decision support for public health intervention.展开更多
This study examined carbonate dynamics in the northwestern South China Sea(NWSCS),an area jointly influenced by upwelling,river plumes and submarine groundwater discharge.Data were obtained from two cruises conducted ...This study examined carbonate dynamics in the northwestern South China Sea(NWSCS),an area jointly influenced by upwelling,river plumes and submarine groundwater discharge.Data were obtained from two cruises conducted in summer 2009 and 2012.In 2009,a high salinity-low temperature water mass occurred nearshore off northeastern Hainan Island,indicative of upwelling,commonly referred to as HNEU.A river plume fueled primarily by local rivers and characterized by low salinity and high temperature was observed in the NWSCS off the mainland roughly along the 30 m isobath.In 2012,coastal upwelling off northeastern Hainan Island was not detectable at the surface,but was observed at a different location off eastern Hainan Island(HEU).River plume waters in 2012 were patchily distributed,with a low salinity zone further westerly than that in 2009 and another on the mid-shelf of the NWSCS sourced from the Pearl River which reached out~250 km from the mouth of the Pearl River Estuary.In 2009,elevated dissolved inorganic carbon(DIC)and total alkalinity(TA)occurred in the coastal plume,where submarine groundwater discharge contributed DIC and TA additions of 38.9±20.5 and 42.5±22.3μmol kg^(−1),respectively,with a DIC/TA ratio of~0.92,which made a minor contribution to the variation of seawater partial pressure of CO_(2)(pCO_(2)),pH and the aragonite saturation state index(Ω_(arag)).Additionally,high surface phytoplankton production consumed DIC of 10.0±10.4μmol kg^(−1) but did not significantly affect TA,which dominated pCO_(2) drawdown in the coastal plume water and increased the pH andΩ_(arag) at surface.Submarine groundwater discharge was also observed in the region influenced by upwelling,but to a lesser degree than that impacted by coastal plume.Lower pH andΩ_(arag) and higher pCO_(2) values than in offshore waters were observed downstream of the upwelling system,attributable largely to organic matter remineralization with a DIC addition of 23.8±8.4μmol kg^(−1).In 2012,submarine groundwater discharge was not detected but high phytoplankton production dominated carbonate dynamics in the coastal plume water with a net DIC consumption of 104.2μmol kg^(−1),which markedly drew down sea surface pCO_(2) and increased pH andΩ_(arag).In the Pearl River Plume,the solubility-driven CO_(2) sink exceeded biological CO_(2) uptake,resulting in an additional decrease of pH andΩ_(arag) and increase of seawater pCO_(2).Taken together,this study demonstrated complex spatial and year-to-year variability,and the controls of the carbonate system under the joint modulations of upwelling,river plumes and submarine groundwater discharge.A first order estimate that considered the rise of atmospheric CO_(2) and seawater temperature further suggested a high risk of ocean acidification in this coastal area by the end of this century,which could be amplified under the stresses of river plumes,submarine groundwater discharge and organic matter remineralization.展开更多
This study investigates aberrant DNA methylations as potential diagnosis and prognosis markers for esophageal squamous-cell carcinoma(ESCC),which if diagnosed at advanced stages has<30%five-year survival rate.Compa...This study investigates aberrant DNA methylations as potential diagnosis and prognosis markers for esophageal squamous-cell carcinoma(ESCC),which if diagnosed at advanced stages has<30%five-year survival rate.Comparing genome-wide methylation sites of 91 ESCC and matched adjacent normal tissues,we identified 35,577 differentially methylated CpG sites(DMCs)and characterized their distribution patterns.展开更多
Histone methylation is a kind of important epigenetic modification which occurs on the lysine residue or arginine residue of histone tails(Zhang and Reinberg,2001).It takes part in multiple biological processes,incl...Histone methylation is a kind of important epigenetic modification which occurs on the lysine residue or arginine residue of histone tails(Zhang and Reinberg,2001).It takes part in multiple biological processes,including gene expression,genomic stability,stem cell maturity,genetic imprinting,mitosis and development(Fischle et al.,2005).展开更多
文摘In this paper, a novel reconstruction method is presented for Near Infrared (NIR) 2-D imaging to recover optical absorption coefficients from laboratory phantom data. The main body of this work validates a new generation of highly efficient reconstruction algorithms called “Globally Convergent Method” (GCM) based upon actual measurements taken from brain-shape phantoms. It has been demonstrated in earlier studies using computer-simulated data that this type of reconstructions is stable for imaging complex distributions of optical absorption. The results in this paper demonstrate the excellent capability of GCM in working with experimental data measured from optical phantoms mimicking a rat brain with stroke.
基金supported by the Key Research and Development Program of Zhejiang Province(Grant Numbers 2020C03036 and 2021C03102)the National Natural Science Foundation of China(Grant Numbers 31801098 and 81830027)+2 种基金National Key Research and Development Program for Active Health and Aging Response(Grant Number 2020YFC2008200)the Major Scientific and Technological Innovation Projects of Wen Zhou(Grant Number ZY2020013)the Internal Fund Project of Eye Hospital of Wenzhou Medical University(Grant Numbers YJGG20181001 and KYQD20190101).
文摘Background:Myopia is the most common visual impairment in children and adolescents worldwide.This study described an economical and effective population-based screening pipeline and performed the project of a million scale children and adolescents myopia survey(CAMS),which will shed light on the further study of myopia from the level of epidemiology and precision medicine.Methods:We developed a novel population-based screening pattern,an intelligent screening process and internetbased information transmission and analysis system to carry out the survey consisting of school children in Wenzhou,China.The examination items include unaided distance visual acuity,presenting distance visual acuity,and noncycloplegic autorefraction.Myopia and high myopia were defined as spherical equivalent(SE)≤−1.00 diopters(D)and SE≤−6.00 D,respectively.Next,the reports of the vision checking were automatically sent to parents and the related departments.The CAMS project will be done two to four times annually with the support of the government.An online eyesight status information management system(OESIMS)was developed to construct comprehensive and efficient electronic vision health records(EVHRs)for myopia information inquiry,risk pre-warning,and further study.Results:The CAMS completed the first-round of screening within 30 days for 99.41%of Wenzhou students from districts and counties,in June 2019.A total of 1,060,925 participants were eligible for CAMS and 1,054,251(99.37%participation rate)were selected through data quality control,which comprised 1305 schools,and 580,609,251,050 and 170,967 elementary,middle,and high school students.The mean age of participants was 12.21±3.32 years(6-20 years),the female-to-male ratio was 0.82.The prevalence of myopia in elementary,middle,and high school students was 38.16%,77.52%,and 84.00%,respectively,and the high myopia incidence was 0.95%,6.90%,and 12.98%.Conclusions:The CAMS standardized myopia screening model involves automating large-scale information collection,data transmission,data analysis and early warning,thereby supporting myopia prevention and control.The entire survey reduced 90%of staff,cost,and time consumption compared with previous surveys.This will provide new insights for decision support for public health intervention.
基金funded by the National Natural Science Foundation of China(Grant Nos.42188102,41206061)the Hong Kong Research Grants Council(Grant No.T21-602/16-R).
文摘This study examined carbonate dynamics in the northwestern South China Sea(NWSCS),an area jointly influenced by upwelling,river plumes and submarine groundwater discharge.Data were obtained from two cruises conducted in summer 2009 and 2012.In 2009,a high salinity-low temperature water mass occurred nearshore off northeastern Hainan Island,indicative of upwelling,commonly referred to as HNEU.A river plume fueled primarily by local rivers and characterized by low salinity and high temperature was observed in the NWSCS off the mainland roughly along the 30 m isobath.In 2012,coastal upwelling off northeastern Hainan Island was not detectable at the surface,but was observed at a different location off eastern Hainan Island(HEU).River plume waters in 2012 were patchily distributed,with a low salinity zone further westerly than that in 2009 and another on the mid-shelf of the NWSCS sourced from the Pearl River which reached out~250 km from the mouth of the Pearl River Estuary.In 2009,elevated dissolved inorganic carbon(DIC)and total alkalinity(TA)occurred in the coastal plume,where submarine groundwater discharge contributed DIC and TA additions of 38.9±20.5 and 42.5±22.3μmol kg^(−1),respectively,with a DIC/TA ratio of~0.92,which made a minor contribution to the variation of seawater partial pressure of CO_(2)(pCO_(2)),pH and the aragonite saturation state index(Ω_(arag)).Additionally,high surface phytoplankton production consumed DIC of 10.0±10.4μmol kg^(−1) but did not significantly affect TA,which dominated pCO_(2) drawdown in the coastal plume water and increased the pH andΩ_(arag) at surface.Submarine groundwater discharge was also observed in the region influenced by upwelling,but to a lesser degree than that impacted by coastal plume.Lower pH andΩ_(arag) and higher pCO_(2) values than in offshore waters were observed downstream of the upwelling system,attributable largely to organic matter remineralization with a DIC addition of 23.8±8.4μmol kg^(−1).In 2012,submarine groundwater discharge was not detected but high phytoplankton production dominated carbonate dynamics in the coastal plume water with a net DIC consumption of 104.2μmol kg^(−1),which markedly drew down sea surface pCO_(2) and increased pH andΩ_(arag).In the Pearl River Plume,the solubility-driven CO_(2) sink exceeded biological CO_(2) uptake,resulting in an additional decrease of pH andΩ_(arag) and increase of seawater pCO_(2).Taken together,this study demonstrated complex spatial and year-to-year variability,and the controls of the carbonate system under the joint modulations of upwelling,river plumes and submarine groundwater discharge.A first order estimate that considered the rise of atmospheric CO_(2) and seawater temperature further suggested a high risk of ocean acidification in this coastal area by the end of this century,which could be amplified under the stresses of river plumes,submarine groundwater discharge and organic matter remineralization.
基金Supported by National Natural Science Foundation of China(81988101 to D.L.and C.W.)National Science Fund for Distinguished Young Scholars(81725015 to C.W.)+2 种基金Chinese Academy Medical Sciences Innovation Fund for Medical Sciences(2021-I2M-1-013 to D.L.,C.W.and W.T.,2019-I2M-2-001 to D.L and C.W.)Beijing Outstanding Young Scientist Program(BJJWZYJH01201910023027 to C.W.)the National Key R&D Program of China(2021YFC2502000 to Y.L.).
文摘This study investigates aberrant DNA methylations as potential diagnosis and prognosis markers for esophageal squamous-cell carcinoma(ESCC),which if diagnosed at advanced stages has<30%five-year survival rate.Comparing genome-wide methylation sites of 91 ESCC and matched adjacent normal tissues,we identified 35,577 differentially methylated CpG sites(DMCs)and characterized their distribution patterns.
基金supported by the National Natural Science Foundation of China(Nos.31540033 and91131002)the Precision Medicine Research Program of the Chinese Academy of Sciences(KJZD-EW-L14)+2 种基金the Strategic Priority Research Program of the Chinese Academy of Sciences(XDA12020343)the National Basic Research Program of China(2013CB911001 and 2012CB518302)the National Excellent Youth Science Foundation of China(No.31222030)
文摘Histone methylation is a kind of important epigenetic modification which occurs on the lysine residue or arginine residue of histone tails(Zhang and Reinberg,2001).It takes part in multiple biological processes,including gene expression,genomic stability,stem cell maturity,genetic imprinting,mitosis and development(Fischle et al.,2005).