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BioTreasury:a community-based repository enabling indexing and rating of bioinformatics tools
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作者 Qi Zhao Xin Zhou +13 位作者 Jingxing Wu jieyi cai Xiaoqiong Bao Lin Tang Chaoye Wang Chunlei Liu Yukai Wang Yuyan Teng Mohan Zheng Weiping Mu Zhixiang Zuo Yubin Xie Xiaotong Luo Jian Ren 《Science China(Life Sciences)》 SCIE CAS CSCD 2024年第2期221-229,共9页
The exponential growth of bioinformatics tools in recent years has posed challenges for scientists in selecting the most suitable one for their data analysis assignments.Therefore,to aid scientists in making informed ... The exponential growth of bioinformatics tools in recent years has posed challenges for scientists in selecting the most suitable one for their data analysis assignments.Therefore,to aid scientists in making informed choices,a community-based platform that indexes and rates bioinformatics tools is urgently needed.In this study,we introduce Bio Treasury(http://biotreasury.rjmart.cn),an integrated communitybased repository that provides an interactive platform for users and developers to share their experiences in various bioinformatics tools.Bio Treasury offers a comprehensive collection of well-indexed bioinformatics software,tools,and databases,totaling over 10,000 entries.In the past two years,we have continuously improved and maintained Bio Treasury,adding several exciting features,including creating structured homepages for every tool and user,a hierarchical category of bioinformatics tools and classifying tools using large language model(LLM).Bio Treasury streamlines the tool submission process with intelligent auto-completion.Additionally,Bio Treasury provides a wide range of social features,for example,enabling users to participate in interactive discussions,rate tools,build and share tool collections for the public.We believe Bio Treasury can be a valuable resource and knowledge-sharing platform for the biomedical community.It empowers researchers to effectively discover and evaluate bioinformatics tools,fostering collaboration and advancing bioinformatics research. 展开更多
关键词 bioinformatics tools index tool database rating system large language model tool collections shari
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Color-tunable hypersensitive temperature sensor based on metal organic framework doped with Eu^(3+)and Dy^(3+)via phonon-assisted energy transfer 被引量:1
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作者 Mingze Zhang Lin Lin +7 位作者 Zhuohong Feng Zhezhe Wang Yuanming Yang Wenjun Ma jieyi cai Pan Lu Siyi Jia Zhiqiang Zheng 《Journal of Rare Earths》 SCIE EI CAS CSCD 2023年第11期1662-1669,I0001,共9页
In this work,catena-[(μ-benzene-1,3,5-tricarboxylato)-(1,10-phenanthroline)-(N,N-dimethylfo rmamide)-gadolinium(ⅲ)-N,N-dimethylformamide solvate](denoted as Gd-MOF)co-doped with Eu^(3+)and Dy^(3+)was successfully sy... In this work,catena-[(μ-benzene-1,3,5-tricarboxylato)-(1,10-phenanthroline)-(N,N-dimethylfo rmamide)-gadolinium(ⅲ)-N,N-dimethylformamide solvate](denoted as Gd-MOF)co-doped with Eu^(3+)and Dy^(3+)was successfully synthesized.The entire X-ray diffraction peaks of the sample match well with the GdMOF phase.A detailed characterization by inductively coupled plasma mass spectrometry(ICP-MS)shows that the actual concentration is basically consistent with the design concentration.The temperature sensing properties of Gd-MOF:Eu^(3+),Dy^(3+)were analyzed by temperature-dependent fluorescence spectra from 213 to 453 K.As temperature rises,the emission color of Gd-MOF:Eu^(3+),Dy^(3+)changes from yellow to red.The relative sensitivity reaches a maximum of 5.87%/K at 383 K in the Gd-MOF:1%Eu^(3+),30%Dy^(3+)sample.The high relative sensitivity of this MOF is due to the phonon-assisted energy transfer from Dy^(3+)to Eu^(3+),which is proved via fluorescence decay curves and fluoresce nce spectra.The major route of this energy transfer is^(4)F_(9/2)(Dy^(3+))→^(5)D_(1)(Eu^(3+)). 展开更多
关键词 Rare-earth doped phosphors Tempetature sensor MOF Phonon-assisted energy transfer
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