Juglandaceae species are plants of great economic value and have been cultivated,domesticated,and utilized by human society for a long time.Their edible,nutrient-rich nuts and tough,durable wood have attracted the att...Juglandaceae species are plants of great economic value and have been cultivated,domesticated,and utilized by human society for a long time.Their edible,nutrient-rich nuts and tough,durable wood have attracted the attention of botanists and breeders.With the advent of the genomics era,genome sequencing of the Juglandaceae family has been greatly accelerated,and a large amount of data has been generated.In this paper,we introduce the Portal of Juglandaceae(PJU),a tool to bring all these data together.The PJU contains genomes,gene-coding sequences,protein sequences,various types of annotation information,expression data,and miRNA data,which are configured with BLAST,JBrowse,and our self-developed synteny analysis tool.The PJU has a user-friendly and straightforward interface that performs a variety of query tasks with a few simple operations.In the future,we hope that the PJU will serve as a hub for the study of the Juglandaceae family.展开更多
基金supported by grants from the National Natural Science Foundation of China(31570666)Major Science and Technology Projects of Zhejiang Province(2018C02004)+1 种基金Major Scientific and Technological Projects for the Selection of New Varieties of Agriculture in Zhejiang Province(2016C02052-13)National Key R&D Program of China(2018YFD1000604).
文摘Juglandaceae species are plants of great economic value and have been cultivated,domesticated,and utilized by human society for a long time.Their edible,nutrient-rich nuts and tough,durable wood have attracted the attention of botanists and breeders.With the advent of the genomics era,genome sequencing of the Juglandaceae family has been greatly accelerated,and a large amount of data has been generated.In this paper,we introduce the Portal of Juglandaceae(PJU),a tool to bring all these data together.The PJU contains genomes,gene-coding sequences,protein sequences,various types of annotation information,expression data,and miRNA data,which are configured with BLAST,JBrowse,and our self-developed synteny analysis tool.The PJU has a user-friendly and straightforward interface that performs a variety of query tasks with a few simple operations.In the future,we hope that the PJU will serve as a hub for the study of the Juglandaceae family.
