Human activity over natural inputs determines the bacterial community in an ice core from the Muztag ata glacier

Ice core provides a valuable vertical timeline of past climates and anthropogenic activities.Environmental proxies have been widely used in these studies,but there are few biological indicators available.To address this gap,we investigated the bacterial community from a 74 m ice core of Muztag ata glacier on the Tibetan Plateau to link biological indicators with past climate and anthropogenic activities.By analyzing the portion of the ice core with environmental proxies available(corresponding to 1907 to 1991),we observed an increase in bacterial richness throughout the ice core,which was associated with higher NH_(4)^(+),an indicator of agricultural development.The bacterial community was jointly determined by human activity,natural input,and air temperature,with a strong human influence after the 1950s.Furthermore,the relative abundance of animal gut-associated bacteria,including Aerococcaceae,Nocardiaceae,Muribaculaceae,and Lachnospiraceae,was associated with livestock number changes in the Central Asian region.Together with other bacterial lineages,they jointly explained 59.8%of the livestock number changes.This study provides quantitative evidence of the associations between bacterial indicators and past climate and human activities,highlighting the potential of using bacterial proxies for ice core studies.

Horizontal and vertical gene transfer drive sediment antibiotic resistome in an urban lagoon system

Rapid urbanization has resulted in pervasive occurrence of antibiotic resistance genes(ARGs)in urban aquatic ecosystems.However,limited information is available concerning the ARG profiles and the forces responsible for their assembly in urban landscape lagoon systems.Here,we employed high-throughput quantitative PCR(HT-q PCR)to characterize the spatial variations of ARGs in surface and core sediments of Yundang Lagoon,China.The results indicated that the average richness and absolute abundance of ARGs were 11 and 53 times higher in the lagoon sediments as compared to pristine reference Tibetan lake sediments,highlighting the role of anthropogenic activities in ARG pollution.Co-occurrence network analysis indicated that various anaerobic prokaryotic genera belonging to Alpha-,Deltaproteobacteria,Bacteroidetes,Euryarchaeota,Firmicutes and Synergistetes were the potential hosts of ARGs.The partial least squares-path modeling(PLS-PM)analysis revealed positive and negative indirect effects of physicochemical factors and heavy metals on the lagoon ARG profiles,via biotic factors,respectively.The horizontal(mediated by mobile genetic elements)and vertical(mediated by prokaryotic communities)gene transfer may directly contribute the most to drive the abundance and composition of ARGs,respectively.Furthermore,the neutral community model demonstrated that the assembly of sediment ARG communities was jointly governed by deterministic and stochastic processes.Overall,this study provides novel insights into the diversity and distribution of ARGs in the benthic habitat of urban lagoon systems and underlying mechanisms for the spread and proliferation of ARGs.

Elevational patterns of abundant and rare bacterial diversity and composition in mountain streams in the southeast of the Tibetan Plateau

Elevational gradients are powerful ‘natural laboratory' for testing the responses of microbes to geophysical influences. Microbial communities are normally composed of a few abundant and many rare taxa. Abundant and rare taxa play different ecological roles in kinds of environments, but how their diversity and composition patterns response to elevation gradients is still poorly elucidated. In this study, we investigated the elevational patterns of abundant and rare bacterial diversity and composition in a mountain stream from 712 to 3435 m at Gangrigabu Mountain on the Tibetan Plateau, China. Our results revealed abundant and rare bacteria had similar decreasing elevation trend of alpha diversity, and both of them showed a significant elevational distance-decay relationship. However, the turnover rate of the elevational distance-decay of rare bacteria was higher than that of abundant bacteria. The species-abundance distribution patterns of rare taxonomic composition were associated with the elevational gradient, while most of abundant bacterial clades did not display any relationships with elevation.Our results suggested that rare bacteria were more sensitive to changes in elevation gradient.