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Bacterial artificial chromosome library construction of root-knot nematode resistant pepper genotype HDA149 and identification of clones linked to Me3 resistant locus
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作者 GUO Xiao YANG Xiao-hui +5 位作者 YANG Yu MAO Zhen-chuan liU Feng MA Wei-qing XIE Bing-yan li guang-cun 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2017年第1期57-64,共8页
Pepper (Capsicum annuum. L.) is a widely cultivated vegetable crop worldwide and has the second largest planting area and the first largest vegetable output and value in China. Pepper root-knot nematode (Meloidogyn... Pepper (Capsicum annuum. L.) is a widely cultivated vegetable crop worldwide and has the second largest planting area and the first largest vegetable output and value in China. Pepper root-knot nematode (Meloidogyne spp.) is one of the most serious pests of pepper, which caused huge losses every year. Previous studies showed that the Me3 gene is resistant to a wide range of Meloidogyne species, including M. arenaria, M. javanica, and M. incognita. HDA149, a double haploid pepper genotype, harboring the root-knot nematode resistance gene Me3, was used to construct bacterial artificial chro- mosome library (BAC) via the vector of CopyControFM pCC1 in this study. The library consists of 210 200 BAC clones and is equivalent to 5.3 pepper genomes. The average insert size is 95 kb, and most of them are 90-120 kb; but the empty clones are less than 3%. In order to screen the BAC library easily, 550 super pools with 384 BAC clones of each pool were further developed in this study. Specific primers from Me3 gene locus were used for BAC library screening, and more than 20 positive BAC clones were obtained. Then the selected positive BAC clones were analyzed by restriction enzyme digestion, BAC-end sequencing, marker development, and new positive BAC clones exploration, respectively. Finally, the contig with total length of about 300 kb linked to the Me3 locus was constructed based on chromosome walking strategy, which made a solid foundation for the cloning of the important root-knot nematode resistance gene Me3. 展开更多
关键词 PEPPER bacterial artificial chromosome library.(BAC) root-knot nematode Me3 gene CONTIG
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基于RGB颜色空间评价马铃薯块茎绿化程度 被引量:1
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作者 王硕 鲍天旸 +5 位作者 刘建刚 段绍光 简银巧 李广存 金黎平 徐建飞 《作物学报》 CAS CSCD 北大核心 2023年第4期1102-1110,共9页
马铃薯是世界上最重要的作物之一,块茎作为马铃薯的商品器官,块茎绿化严重影响马铃薯商品品质,造成大量的资源浪费。建立一种方便快捷的块茎绿化评价方法,对于马铃薯种质资源鉴定和块茎品质评价具有重要意义。本研究基于提取块茎颜色空... 马铃薯是世界上最重要的作物之一,块茎作为马铃薯的商品器官,块茎绿化严重影响马铃薯商品品质,造成大量的资源浪费。建立一种方便快捷的块茎绿化评价方法,对于马铃薯种质资源鉴定和块茎品质评价具有重要意义。本研究基于提取块茎颜色空间特征,结合RGB颜色空间色差分析,对15个马铃薯四倍体和二倍体品种(系)材料的绿化趋势和绿化程度进行了系统评价。供试材料块茎在25℃条件下,125μmolm–2s–1光照强度下,中薯2号、中薯18号、中薯19号、Atlantic、Favorita和Kondor的绿化速度较快,HS66的绿化速度较慢。在光照处理9 d后,块茎色差值趋于稳定,在光照处理13d后,不同品种绿化程度差异明显,其中Favorita的绿化程度最大,中薯28号的绿化程度最小。本研究建立的基于RGB颜色空间的马铃薯块茎绿化评价方法能够准确区分不同品种(系)的绿化速度和绿化程度,该方法简便、高效,结果可靠,为精准评价块茎绿化程度并进行相关分析提供了技术方法参考。 展开更多
关键词 马铃薯 块茎 绿化 RGB颜色特征 色差分析
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四倍体马铃薯熟性连锁SCAR标记的开发与验证 被引量:6
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作者 李兴翠 李广存 +5 位作者 徐建飞 段绍光 卞春松 庞万福 刘杰 金黎平 《作物学报》 CAS CSCD 北大核心 2017年第6期821-828,共8页
熟性是马铃薯的重要数量性状之一。本研究以马铃薯早熟品种中薯3号和晚熟品种中薯19及其熟性分离群体(221份)为材料,高通量简化基因组测序和集群分离分析(BSA)相结合,开发获得一个SCAR标记,命名为SCAR5-8。进一步利用该标记对分离群体... 熟性是马铃薯的重要数量性状之一。本研究以马铃薯早熟品种中薯3号和晚熟品种中薯19及其熟性分离群体(221份)为材料,高通量简化基因组测序和集群分离分析(BSA)相结合,开发获得一个SCAR标记,命名为SCAR5-8。进一步利用该标记对分离群体的53份早熟和63份晚熟子代及70份四倍体马铃薯品种进行验证,结果表明,该标记在分离群体和四倍体品种中的检测结果与表型鉴定结果总体吻合度分别达87.1%与81.4%,Pearson’s双侧相关分析显示,其相关性均达极显著水平。该SCAR标记可被用于标记辅助选择,对加速四倍体马铃薯育种进程具有重要意义。 展开更多
关键词 马铃薯 熟性 标记开发 分子标记辅助育种
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内蒙古索伦地区中二叠统哲斯组碎屑岩成岩作用及其对储层物性的影响 被引量:1
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作者 李嘉慧 朱占平 +3 位作者 李广存 齐洪亮 楚江涛 李伟 《世界地质》 CAS 2018年第2期548-558,共11页
利用薄片确定砂岩类型、扫描电镜观察碎屑岩微观特征并划分成岩阶段以及对岩石储层进行物性测试分析等方法,系统地探究了内蒙古索伦地区中二叠统哲斯组碎屑岩成岩作用及其对储层物性的影响。研究表明该地区砂岩胶结物有钙质胶结物、硅... 利用薄片确定砂岩类型、扫描电镜观察碎屑岩微观特征并划分成岩阶段以及对岩石储层进行物性测试分析等方法,系统地探究了内蒙古索伦地区中二叠统哲斯组碎屑岩成岩作用及其对储层物性的影响。研究表明该地区砂岩胶结物有钙质胶结物、硅质胶结物、黏土矿物胶结物和凝灰质胶结物,其中钙质胶结物多为方解石,硅质胶结主要表现为石英次生加大,黏土胶结物以伊利石为主,凝灰质胶结物在该地区出现较少。地化数据显示哲斯组泥岩有机质镜质体反射率值(Ro)在2%~4%之间、最高热解温度(T_(max))>490℃、伊利石/蒙皂石(I/S)的蒙皂石层<15%;薄片镜下观察发现碎屑颗粒间以线接触为主,扫描电镜观察石英次生加大级别为Ⅲ—Ⅳ级。综合分析确定内蒙古索伦地区哲斯组碎屑岩处于晚成岩阶段B期—C期。压实和胶结作用一定程度上降低砂岩的孔隙度和渗透率;而溶蚀溶解作用提高砂岩的孔隙度和渗透率。 展开更多
关键词 索伦地区 哲斯组 成岩作用 成岩阶段
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基于2b-RAD测序的四倍体马铃薯熟性相关的分子标记开发
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作者 惠志明 徐建飞 +5 位作者 简银巧 卞春松 段绍光 胡军 李广存 金黎平 《作物学报》 CAS CSCD 北大核心 2022年第9期2274-2284,共11页
马铃薯熟性是由多基因控制的数量性状,是我国不同栽培区划选择适宜品种的重要指标之一。本研究以晚熟品种中薯18号和早熟品种中薯5号及其F_(1)分离群体为材料,2018—2019年连续2年对“中薯18号(母本)×中薯5号(父本)”杂交分离群体... 马铃薯熟性是由多基因控制的数量性状,是我国不同栽培区划选择适宜品种的重要指标之一。本研究以晚熟品种中薯18号和早熟品种中薯5号及其F_(1)分离群体为材料,2018—2019年连续2年对“中薯18号(母本)×中薯5号(父本)”杂交分离群体进行熟性评价,从中筛选出极端晚熟和极端早熟的基因型各30个,并分别构建极端晚熟和极端早熟基因组DNA混池。利用简化基因组2b-RAD(2b-restriction site-associated DNA)技术测序,寻找差异标签开发出3个与熟性连锁的分子标记SCARA2-2、SCARA4-21和SCARA5-16,3个分子标记联合使用对熟性分离群体子代进行验证,晚、早熟表型符合率分别到达了87.5%和93.0%,这些分子标记的开发和联合使用对辅助马铃薯熟性选择具有重要的参考价值。 展开更多
关键词 马铃薯 熟性 2b-RAD 分子标记
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Cloning of Proteinase Inhibitor Gene StPI in Diploid Potato and Its Expression Analysis 被引量:3
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作者 li guang-cun JINli-ping +2 位作者 XIE Kai-yun li Ying QU Dong-yu 《Agricultural Sciences in China》 CAS CSCD 2007年第11期1315-1321,共7页
A full-length cDNA of proteinase inhibitor gene with completed open reading frame of 116 amino acids was cloned from Ralstonia solanacearum (Rs) resistant potato leaves using the rapid amplification of cDNA ends (R... A full-length cDNA of proteinase inhibitor gene with completed open reading frame of 116 amino acids was cloned from Ralstonia solanacearum (Rs) resistant potato leaves using the rapid amplification of cDNA ends (RACE) method and designated as StPI. BLAST search against NCBI showed that the StPI gene shared 89% identity with potato proteinase inhibitor I precursor in nucleotide and 74% in amino acid. Analysis of semi-quantitative RT-PCR indicated that this gene was induced by Rs as well as up-regulated by jasmonic acid (JA). The StPI gene expression reached the highest level during 6-12 h post Rs-inoculation or JA-treatment, and then leveled off. Moreover, this gene was strongly induced by JA and its mRNA accumulation increased more quickly than that of Rs-inoculation. The StPI gene may play a role in potato resistance against Rs. The induction of StPI by Rs invasion may have a similar signal transduction pathway with JA treatment. 展开更多
关键词 potato bacterial wilt RACE StPI gene full-length cDNA gene expression
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Overexpression of StCYS1 gene enhances tolerance to salt stress in the transgenic potato(Solanum tuberosum L.)plant 被引量:1
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作者 liU Min-min li Ya-lun +4 位作者 li guang-cun DONG Tian-tian liU Shi-yang liU Pei WANG Qing-guo 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2020年第9期2239-2246,共8页
Salt stress seriously restricts the growth and yield of potatoes.Plant cystatins are vital players in biotic stress and development,however,their roles in salt stress resistance remain elusive.Here,we report that StCY... Salt stress seriously restricts the growth and yield of potatoes.Plant cystatins are vital players in biotic stress and development,however,their roles in salt stress resistance remain elusive.Here,we report that StCYS1 positively regulates salt tolerance in potato plants.An in vitro biochemical test demonstrated that StCYS1 is a bona fide cystatin.Overexpression of StCYS1 in both Escherichia coli and potato plants significantly increased their resistance to high salinity.Further analysis revealed that the transgenic plants accumulated more proline and chlorophyll under salt stress conditions.Moreover,the transgenic plants displayed higher H2O2 scavenging capability and cell membrane integrity compared with wild-type potato.These results demonstrate that StCYS1 is closely correlated with salt stress and its overaccumulation can substantially enhance salt stress resistance. 展开更多
关键词 POTATO salt stress CYSTATIN StCYS1 OVEREXPRESSION
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