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SULF1作为特发性肺纤维化与肺腺癌共同基因的鉴定及其生物学功能分析
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作者 王俊轶 鲁璐 +4 位作者 何翔 马丽娟 陈涛 李国平 于海杰 《中国肺癌杂志》 CAS CSCD 北大核心 2023年第9期669-683,共15页
背景和目的特发性肺纤维化(idiopathic pulmonary fibrosis,IPF)是一种原因不明的慢性、进行性、间质性肺疾病,确诊后中位生存期为3-5年。IPF与肺癌风险增加有关。因此,探索IPF和肺腺癌的关键共同致病基因和分子通路,对开发IPF合并肺腺... 背景和目的特发性肺纤维化(idiopathic pulmonary fibrosis,IPF)是一种原因不明的慢性、进行性、间质性肺疾病,确诊后中位生存期为3-5年。IPF与肺癌风险增加有关。因此,探索IPF和肺腺癌的关键共同致病基因和分子通路,对开发IPF合并肺腺癌的新治疗手段和个性化精准治疗策略的制定具有重要意义。方法利用基因表达综合(Gene Expression Omnibus,GEO)数据库中公开的IPF和肺腺癌基因表达数据集进行生物信息学分析。使用加权基因共表达网络分析识别涉及两种疾病进程的共同基因,进而功能富集分析。随后,联合额外数据集鉴定两种疾病的核心共同基因。并通过癌症基因组图谱计划(The Cancer Genome Atlas,TCGA)数据库和单细胞RNA测序数据集,分析核心共同基因与患者预后的关系,并评估其在肺腺癌中的表达模式、临床相关性、遗传特征和免疫相关功能。最后通过药物数据库筛选出相关的潜在治疗药物。结果两者之间有529个共同致病基因。其中,SULF1作为核心共同致病基因与患者预后不良相关,其在肺腺癌组织中的表达水平显著升高,同时与高突变频率、显著基因组异质性以及抑制性免疫微环境相关。随后的单细胞分析发现SULF1高表达主要源于肿瘤相关成纤维细胞。SULF1表达与肿瘤药物敏感性变化相关,并筛选出与靶向SULF1高表达成纤维细胞相关的潜在小分子药物。结论本研究鉴别出IPF和肺腺癌之间的共同分子途径和核心基因,其中SULF1可能作为两种疾病的潜在生物标志物和治疗靶点。 展开更多
关键词 肺肿瘤 特发性肺纤维化 加权基因共表达网络分析 SULF1 单细胞转录组学分析
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外显子拼接复合体塑造m^(6)A表观转录组的形成
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作者 宋鹏辉 马丽娟 严冬 《遗传》 CAS CSCD 北大核心 2023年第6期464-471,共8页
N6-甲基腺嘌呤(N6-methyladenosine,m^(6)A)是mRNA中含量最丰富的化学修饰之一,在各种生理病理过程中发挥关键性的作用。m^(6)A修饰主要位于mRNA终止密码子附近和长的内部外显子上,然而导致这一特异性分布的机制却一直不清楚。近期发表... N6-甲基腺嘌呤(N6-methyladenosine,m^(6)A)是mRNA中含量最丰富的化学修饰之一,在各种生理病理过程中发挥关键性的作用。m^(6)A修饰主要位于mRNA终止密码子附近和长的内部外显子上,然而导致这一特异性分布的机制却一直不清楚。近期发表的3篇论文揭示了外显子拼接复合体(exon junction complexes,EJCs)作为m^(6)A修饰的抑制蛋白suppressors,塑造了m^(6)A表观转录组的形成,解决了这一重大问题。由此,本文简要介绍了m^(6)A修饰通路,并结合这些研究成果阐述了EJC对m^(6)A修饰形成的作用和机理,进而说明外显子-内含子结构通过m^(6)A修饰影响mRNA的稳定性,以期理解m^(6)A这一RNA表观修饰领域的最新进展。 展开更多
关键词 RNA修饰 m^(6)A 外显子拼接复合体 剪接 RNA稳定性
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Effects of water salinity and N application rate on water- and N-use efficiency of cotton under drip irrigation 被引量:13
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作者 Wei MIN ZhenAn HOU +3 位作者 lijuan ma Wen ZHANG SiBo RU Jun YE 《Journal of Arid Land》 SCIE CSCD 2014年第4期454-467,共14页
In arid and semi-arid regions, freshwater scarcity and high water salinity are serious and chronic problems for crop production and sustainable agriculture development. We conducted a field experiment to evaluate the ... In arid and semi-arid regions, freshwater scarcity and high water salinity are serious and chronic problems for crop production and sustainable agriculture development. We conducted a field experiment to evaluate the effect of irrigation water salinity and nitrogen(N) application rate on soil salinity and cotton yield under drip irrigation during the 2011 and 2012 growing seasons. The experimental design was a 3×4 factorial with three irrigation water salinity levels(0.35, 4.61 and 8.04 dS/m) and four N application rates(0, 240, 360 and 480 kg N/hm2). Results showed that soil water content increased as the salinity of the irrigation water increased, but decreased as the N application rate increased. Soil salinity increased as the salinity of the irrigation water increased. Specifically, soil salinity measured in 1:5 soil:water extracts was 218% higher in the 4.61 dS/m treatment and 347% higher in the 8.04 dS/m treatment than in the 0.35 dS/m treatment. Nitrogen fertilizer application had relatively little effect on soil salinity, increasing salinity by only 3%–9% compared with the unfertilized treatment. Cotton biomass, cotton yield and evapotranspiration(ET) decreased significantly in both years as the salinity of irrigation water increased, and increased as the N application rate increased regardless of irrigation water salinity; however, the positive effects of N application were reduced when the salinity of the irrigation water was 8.04 dS/m. Water use efficiency(WUE) was significantly higher by 11% in the 0.35 dS/m treatment than in the 8.04 dS/m treatment. There was no significant difference in WUE between the 0.35 dS/m treatment and the 4.61 dS/m treatment. The WUE was also significantly affected by the N application rate. The WUE was highest in the 480 kg N/hm2 treatment, being 31% higher than that in the 0 kg N/hm2 treatment and 12% higher than that in the 240 kg N/hm2 treatment. There was no significant difference between the 360 and 480 kg N/hm2 treatments. The N use efficiency(NUE) was significantly lower in the 8.04 dS/m treatment than in either the 4.61 dS/m or the 0.35 dS/m treatment. There was no significant difference in NUE between the latter two treatments. These results suggest that irrigation water with salinity 〈4.61 dS/m does not have an obvious negative effect on cotton production, WUE or NUE under the experimental conditions. Application of N fertilizer(0–360 kg N/hm2) could alleviate salt damage, promote cotton growth, and increase both cotton yield and water use efficiency. 展开更多
关键词 saline water NITROGEN soil salinity COTTON water use efficiency nitrogen use efficiency
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Assessment of Snow Cover Vulnerability over the Qinghai-Tibetan Plateau 被引量:4
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作者 lijuan ma Dahe Qin +2 位作者 Lingen Bian Cunde Xiao Yong Luo 《Advances in Climate Change Research》 SCIE 2011年第2期93-100,共8页
由在 Qinghai 西藏的高原(QTP ) 上从 98 个气象学的车站使用每日的空气温度和降水数据,和每日的降雪的天气现象数据,这份报纸在温暖状况的当前的气候状况和未来气候下面在 QTP 上在降雪和积累的雪上执行在风险评估。当降雨,降雪,... 由在 Qinghai 西藏的高原(QTP ) 上从 98 个气象学的车站使用每日的空气温度和降水数据,和每日的降雪的天气现象数据,这份报纸在温暖状况的当前的气候状况和未来气候下面在 QTP 上在降雪和积累的雪上执行在风险评估。当降雨,降雪,或积累的雪天气现象发生时,批评价值为当前的气候条件基于每日的空气温度和降水被决定。0 潣摮瑩潩敮 ? 湩畤瑳祲愠摮愠慮祬敺 ? 桴 ? 湥楶潲浮湥慴? 敢敮楦獴漠 ? 捡散敬慲楴杮琠敨瀠慨敳漭瑵漠 ? 的空气温度 ?? 木′湩 ? 展开更多
关键词 青藏高原积雪 漏洞评估 空气温度 青藏高原南部 降雪量 降水资料 天气现象 气候条件
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Temporal-spatial characteristics of observed key parameters of snow cover in China during 1957-2009 被引量:4
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作者 lijuan ma DaHe Qin 《Research in Cold and Arid Regions》 2012年第5期384-393,共10页
Using observed snow cover dam from Chinese meteorological stations, this study indicated that annual mean snow depth, Snow Water Equivalent (SWE), and snow density during 1957-2009 were 0.49 cm, 0.7 ram, and 0.14 g/... Using observed snow cover dam from Chinese meteorological stations, this study indicated that annual mean snow depth, Snow Water Equivalent (SWE), and snow density during 1957-2009 were 0.49 cm, 0.7 ram, and 0.14 g/cm3 over China as a whole, re- spectively. On average, they were all the smallest in the Qinghai-Tibetan Plateau (QTP), and were greater in northwestern China (NW). Spatially, the regions with greater annual mean snow depth and SWE were located in northeastern China including eastern Inner Mongolia (NE), northern Xinjiang municipality, and a small fraction of southwestern QTP. Annual mean snow density was below 0.14 g/cm3 in most of China, and was higher in the QTP, NE, and NW. The trend analyses revealed that both annual mean snow depth and SWE presented increasing trends in NE, NW, the QTP, and China as a whole during 1957-2009. Although the trend in China as a whole was not significant, the amplitude of variation became increasingly greater in the second half of the 20th century. Spatially, the statistically significant (95%-level) positive trends for annual mean snow depth were located in western and northem NE, northwestem Xinjiang municipality, and northeastem QTP. The distribution of positive and negative trends for annu- al mean SWE were similar to that of snow depth in position, but not in range. The range with positive trends of SWE was not as large as that of snow depth, but the range with negative trends was larger. 展开更多
关键词 snow cover snow density snow depth snow water equivalent climate change
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Sensitivity of the Number of Snow Cover Days to Surface Air Temperature over the Qinghai-Tibetan Plateau 被引量:1
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作者 lijuan ma Dahe Qin +2 位作者 Lingen Bian Cunde Xiao Yong Luo 《Advances in Climate Change Research》 SCIE 2010年第2期76-83,共8页
基于雪盖子天(NSCD ) 的数字并且一致为时期的表面空气温度数据 19512004,这研究在 Qinghai 西藏的高原(QTP ) 上在 NSCD 的敏感上执行定量分析到表面空气温度。结果证明在当前的气候下面的极端敏感和敏感比在 QTP 的中央区域在边是更... 基于雪盖子天(NSCD ) 的数字并且一致为时期的表面空气温度数据 19512004,这研究在 Qinghai 西藏的高原(QTP ) 上在 NSCD 的敏感上执行定量分析到表面空气温度。结果证明在当前的气候下面的极端敏感和敏感比在 QTP 的中央区域在边是更高的。在那里存在在车站举起和批评温度,敏感在到达极值之间的强壮的否定关联。在举起和极端敏感之间的否定关联不象以前的一样强壮。当前,在许多车站的 climatological 温度不到达批评阶段。在这些车站的敏感将在温暖的气候的当前的背景下面变得更大,它意味着 NSCD 将对表面空气温度更敏感。引证妈, L. , D。Qin, L。Bian,等, 2010:到在 Qinghai 西藏的高原上的表面空气温度的雪盖子天的数字的敏感。副词。Clim。变化物件, 1, doi:10.3724/SP .J.1248.2010.00076。 展开更多
关键词 气候敏感性 青藏高原 积雪日数 地表气温 温度数据 空气温度 负相关性 定量分析
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Data-driven engineering framework with AI algorithm of Ginkgo Folium tablets manufacturing 被引量:1
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作者 lijuan ma Jing Zhang +8 位作者 Ling Lin Tuanjie Wang Chaofu ma Xiaomeng Wang Mingshuang Li Yanjiang Qiao Yongxiang Wang Guimin Zhang Zhisheng Wu 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2023年第5期2188-2201,共14页
Smart manufacturing still remains critical challenges for pharmaceutical manufacturing.Here,an original data-driven engineering framework was proposed to tackle the challenges.Firstly,from sporadic indicators to five ... Smart manufacturing still remains critical challenges for pharmaceutical manufacturing.Here,an original data-driven engineering framework was proposed to tackle the challenges.Firstly,from sporadic indicators to five kinds of systematic quality characteristics,nearly 2,000,000 real-world data points were successively characterized from Ginkgo Folium tablet manufacturing.Then,from simplex to the multivariate system,the digital process capability diagnosis strategy was proposed by multivariate C_(pk)integrated Bootstrap-t.The C_(pk)of Ginkgo Folium extracts,granules,and tablets were discovered,which was 0.59,0.42,and 0.78,respectively,indicating a relatively weak process capability,especially in granulating.Furthermore,the quality traceability was discovered from unit to end-to-end analysis,which decreased from 2.17 to 1.73.This further proved that attention should be paid to granulating to improve the quality characteristic.In conclusion,this paper provided a data-driven engineering strategy empowering industrial innovation to face the challenge of smart pharmaceutical manufacturing. 展开更多
关键词 Smart manufacturing Data-driven engineering Artificial intelligence Information fusion Process capability index End-to-end Quality traceability Real-world Ginkgo Folium products
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Snow water equivalent over Eurasia in the next 50 years projected by aggregated CMIP3 models
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作者 lijuan ma Yong Luo DaHe Qin 《Research in Cold and Arid Regions》 2012年第2期93-106,共14页
Based on remote sensing snow water equivalent (SWE) data, the simulated SWE in 20C3M experiments from 14 models attend- hag the third phase of the Coupled Models for Inter-comparison Project (CMIP3) was first eval... Based on remote sensing snow water equivalent (SWE) data, the simulated SWE in 20C3M experiments from 14 models attend- hag the third phase of the Coupled Models for Inter-comparison Project (CMIP3) was first evaluated by computing the different percentage, spatial correlation coefficient, and standard deviation of biases during 1979-2000. Then, the diagnosed ten models that performed better simulation in Eurasian SWE were aggregated by arithmetic mean to project the changes of Eurasian SWE in 2002-2060. Results show that SWE will decrease significantly for Eurasia as a whole in the next 50 years. Spatially, significant decreasing trends dominate Eurasia except for significant increase in the northeastern part. Seasonally, decreasing proportion will be greatest in summer indicating that snow cover in wanner seasons is more sensitive to climate warming. However, absolute decreasing trends are not the greatest in winter, but in spring. This is caused by the greater magnitude of negative trends, but smaller positive trends in spring than in winter. The changing characteristics of increasing in eastern Eurasia and decreasing in western Eurasia and over the Qinghai-Tibetan Plateau favor the viewpoint that there will be more rainfall in North China and less in the middle and lower reaches of the Yangtze River in summer. Additionally, the decreasing rate and extent with significant decreasing trends under SRES A2 are greater than those under SRES B1, indicating that the emission of greenhouse gases (GHG) will speed up the decreasing rate of snow cover both temporally and spatially. It is crucial to control the discharge of GHG emissions for mitigating the disappearance of snow cover over Eurasia. 展开更多
关键词 snow water equivalent PROJECTION CMIP3 EURASIA climate change simulation
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Art Museum Education Combined with Elementary and Junior High School
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作者 lijuan ma 《International Journal of Technology Management》 2013年第4期30-32,共3页
关键词 初中教育 小学 美术馆 艺术博物馆
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Accuracy and capability of tri-ponderal mass index in assessing cardio-metabolic risk factors in Chinese children and adolescents aged 3 to 17 years,compared with body mass index
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作者 Rui Chen Lang Ji +6 位作者 lijuan ma Yitong Chen Jiali Duan Mingjing ma Ying Sun Jun Tai Linghui Meng 《Chinese Medical Journal》 SCIE CAS CSCD 2023年第11期1339-1348,共10页
Background:Tri-ponderal mass index(TMI)has been reported to be a more accurate estimate of body fat than body mass index(BMI).This study aims to compare the effectiveness of TMI and BMI in identifying hypertension,dys... Background:Tri-ponderal mass index(TMI)has been reported to be a more accurate estimate of body fat than body mass index(BMI).This study aims to compare the effectiveness of TMI and BMI in identifying hypertension,dyslipidemia,impaired fasting glucose(IFG),abdominal obesity,and clustered cardio-metabolic risk factors(CMRFs)in 3-to 17-year-old children.Methods:A total of 1587 children aged 3 to 17 years were included.Logistic regression was used to evaluate correlations between BMI and TMI.Area under the curves(AUCs)were used to compare discriminative capability among indicators.BMI was converted to BMI-z scores,and accuracy was compared by false-positive rate,false-negative rate,and total misclassification rate.Results:Among children aged 3 to 17 years,the mean TMI was 13.57±2.50 kg/m 3 for boys and 13.3±2.33 kg/m 3 for girls.Odds ratios(ORs)of TMI for hypertension,dyslipidemia,abdominal obesity,and clustered CMRFs ranged from 1.13 to 3.15,higher than BMI,whose ORs ranged from 1.08 to 2.98.AUCs showed similar ability of TMI(AUC:0.83)and BMI(AUC:0.85)in identifying clustered CMRFs.For abdominal obesity and hypertension,the AUC of TMI was 0.92 and 0.64,respectively,which was significantly better than that of BMI,0.85 and 0.61.AUCs of TMI for dyslipidemia and IFG were 0.58 and 0.49.When 85th and 95th of TMI were set as thresholds,total misclassification rates of TMI for clustered CMRFs ranged from 6.5%to 16.4%,which was not significantly different from that of BMI-z scores standardized according to World Health Organization criteria.Conclusions:TMI was found to have equal or even better effectiveness in comparison with BMI in identifying hypertension,abdominal obesity,and clustered CMRFs TMI was more stable than BMI in 3-to 17-year-old children,while it failed to identify dyslipidemia and IFG.It is worth considering the use of TMI for screening CMRFs in children and adolescents. 展开更多
关键词 Tri-ponderal mass index Body mass index Cardio-metabolic risk factors Children Adolescents
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Novel discovery of schisandrin A regulating the interplay of autophagy and apoptosis in oligoasthenospermia by targeting SCF/c-kit and TRPV1 via biosensors 被引量:1
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作者 lijuan ma Boyi Li +10 位作者 Jinchen ma Chunyuan Wu Nan Li Kailin Zhou Yun Yan Mingshuang Li Xiaoyan Hu Hao Yan Qi Wang Yanfei Zheng Zhisheng Wu 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2023年第6期2765-2777,共13页
Oligoasthenospermia is the primary cause of infertility.However,there are still enormous challenges in the screening of critical candidates and targets of oligoasthenospermia owing to its complex mechanism.In this stu... Oligoasthenospermia is the primary cause of infertility.However,there are still enormous challenges in the screening of critical candidates and targets of oligoasthenospermia owing to its complex mechanism.In this study,stem cell factor(SCF),c-kit,and transient receptor potential vanilloid 1(TRPV1)biosensors were successfully established and applied to studying apoptosis and autophagy mechanisms.Interestingly,the detection limit reached 2.787×10^(-15)g/L,and the quantitative limit reached 1.0×10^(-13)g/L.Furthermore,biosensors were used to investigate the interplay between autophagy and apoptosis.Schisandrin A is an excellent candidate to form a system with c-kit similar to SCF/c-kit with a detection constant(K_(D))of 5.701×10^(-11)mol/L,whereas it had no affinity for SCF.In addition,it also inhibited autophagy in oligoasthenospermia through antagonizing TRPV1 with a K_(D) of up to 4.181×10^(-10)mol/L.In addition,in vivo and in vitro experiments were highly consistent with the biosensor.In summary,high-potency schisandrin A and two potential targets were identified,through which schisandrin A could reverse the apoptosis caused by excessive autophagy during oligoasthenospermia.Our study provides promising insights into the discovery of effective compounds and potential targets via a well-established in vitro-in vivo strategy. 展开更多
关键词 OLIGOASTHENOSPERMIA Male infertility AUTOPHAGY APOPTOSIS BIOSENSOR Schisandrin A.
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3天至6岁中国儿童外周血降钙素原生物参考区间建立 被引量:1
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作者 马展 吴芳珍 +17 位作者 马江涛 陈运生 李贵霞 刘靳波 陈红兵 叶辉铭 边星雁 陈大鹏 柯江维 杨海鸥 马丽娟 潘秋辉 罗红权 蔡徐山 谢云 宋文琪 张磊 张泓 《中华检验医学杂志》 CAS CSCD 北大核心 2022年第6期581-588,共8页
目的通过一项多中心研究,在全国多个地区招募参考个体,建立中国3 d至6岁儿童外周血降钙素原(PCT)的生物参考区间。方法于2020年10月至2021年5月,在全国11个省市的18家医院中招募3 d至6岁表观健康儿童和无特定疾病儿童3353例,分为3~28 d... 目的通过一项多中心研究,在全国多个地区招募参考个体,建立中国3 d至6岁儿童外周血降钙素原(PCT)的生物参考区间。方法于2020年10月至2021年5月,在全国11个省市的18家医院中招募3 d至6岁表观健康儿童和无特定疾病儿童3353例,分为3~28 d、29 d~1岁、1~3岁、4~6岁4个年龄组,收集其血清,使用罗氏Cobas e601电化学发光分析仪和诺尔曼NRM411-S7化学发光分析仪对其PCT进行测定,并采集末梢全血,使用诺尔曼NRM411-S7化学发光分析仪测定其末梢血PCT,剔除离群值后通过Man-WhitneyU检验和Kruskal-Wallis检验分析性别、年龄和标本类型间差异,不同的分组分别取右侧单侧95%可信区间作为其生物参考区间。结果参考人群的外周血PCT水平未检出性别差异,各年龄段的末梢全血与血清PCT水平差异有统计学意义(P<0.01),3~28 d年龄组与其他年龄组间差异有统计学意义。罗氏系统血清PCT参考区间为:3~28 d,<0.23μg/L,29 d~6岁,<0.11μg/L。诺尔曼系统血清PCT参考区间为:3~28 d,<0.21μg/L;29 d~1岁,<0.09μg/L;1~6岁,<0.10μg/L;末梢全血PCT参考区间为:3~28 d,<0.26μg/L;29 d~6岁,<0.15μg/L。结论末梢全血PCT水平分布,静脉血清和末梢全血间均存在有显著性差异;不同年龄组的儿童,尤其是28 d以下组,与其他年龄组之间的PCT水平分布也有显著性差异,故需分别建立其生物参考区间;另外考虑到儿童是高度异质性的群体,不同实验室引用该参考区间前应进行必要的验证。 展开更多
关键词 参考值 降钙素原 儿童 血液
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大气冰冻圈总量与时空结构
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作者 许高洁 窦挺峰 +4 位作者 杨一帆 岳瀚栋 胡斯勒图 马丽娟 效存德 《科学通报》 EI CAS CSCD 北大核心 2022年第34期4130-4139,共10页
大气冰冻圈是大气层内所有冰体的总称,包括冰晶、雪花等,对全球辐射平衡、水循环和灾害天气的形成均具有重要影响,长期以来受到广泛关注.然而,将大气冰冻圈作为一个整体圈层的定量研究较少,相关认识基本停留在概念和理论阶段.本文基于Cl... 大气冰冻圈是大气层内所有冰体的总称,包括冰晶、雪花等,对全球辐射平衡、水循环和灾害天气的形成均具有重要影响,长期以来受到广泛关注.然而,将大气冰冻圈作为一个整体圈层的定量研究较少,相关认识基本停留在概念和理论阶段.本文基于CloudSat和CALIPSO卫星数据联合反演的DARDAR产品,估算了全球大气冰冻圈的总量、三维空间分布和季节变化特征.结果显示:大气冰冻圈总质量约为63[58.8~65.7]Gt,上界为高层冰云的云顶,下界略低于零温层.大尺度环流系统决定了大气冰冻圈的纬向带状分布特征,冰晶形成与增长的微物理机制导致大气冰体在热带上空–8°C等温层出现高值中心.大气冰体的高值区主要分布于低纬度强对流区,从垂直剖面上看,主要分布于对流层中层和低层.痕量冰区(冰水路径<15.0 g/m^(2))主要分布于副热带等高压系统控制区.在高海拔地区,由于水汽含量较低,大气冰含量整体偏低,如青藏高原冬季冰水路径仅为31.3 g/m^(2),约为全球平均值的四分之一.该项研究为进一步认识大气冰冻圈的天气气候效应奠定了基础. 展开更多
关键词 大气冰冻圈 强对流 冰水路径 零温层 痕量冰区
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