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SWI/SNF复合体基因突变促进NSCLC细胞在NSI小鼠体内肝转移的研究
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作者 高玲玲 谢至 +14 位作者 林首恒 吕志异 周文斌 陈冀 朱琳琳 张莉 曾鹏辉 黄晓丹 颜文青 陈宇 卢丹霞 张水莲 郭伟浜 李鹏 张绪超 《中国肺癌杂志》 CAS CSCD 北大核心 2023年第10期753-764,共12页
背景与目的SWI/SNF复合体(switch/sucrose nonfermentable chromatin-remodeling complex,SWI/SNF)是一种重要的染色质重塑复合物,其亚基变异在多种肿瘤中存在,并与多种肿瘤细胞生物学特征相关。但其基因突变是否参与非小细胞肺癌(non-s... 背景与目的SWI/SNF复合体(switch/sucrose nonfermentable chromatin-remodeling complex,SWI/SNF)是一种重要的染色质重塑复合物,其亚基变异在多种肿瘤中存在,并与多种肿瘤细胞生物学特征相关。但其基因突变是否参与非小细胞肺癌(non-small cell lung cancer,NSCLC)肝转移过程尚不清楚。本研究拟探究SWI/SNF复合体基因突变对NSCLC肝转移的影响及潜在机制。方法我们使用全外显子组测序(whole-exome sequencing,WES)分析了NSCLC细胞H1299、H23和H460中SWI/SNF复合体基因突变。通过CRISPR/Cas9(clustered regularly interspaced short palindromic repeats)技术构建了ARID1A基因稳定敲除的H1299细胞株,建立了小鼠模型模拟NSCLC肝转移,观察不同基因突变对肝转移的影响。利用RNA-Seq和蛋白印迹分析差异基因的表达,并通过免疫组化技术(immunohistochemistry,IHC)检测了SWI/SNF复合体调控的靶分子在小鼠肝转移灶中的表达。结果WES分析确定了SWI/SNF复合体基因的突变情况。动物实验结果显示SWI/SNF复合体基因突变与免疫缺陷小鼠较高的肝转移率相关。转录组测序和蛋白印迹分析显示SWI/SNF复合体基因突变细胞中ALDH1A1和APOBEC3B表达上调,尤其是ARID1A蛋白缺失的H460和H1299 sgARID1A中ALDH1A1表达水平显著上升。IHC染色亦显示H460和H1299 sgARID1A细胞肝转移灶中ALDH1A1高表达。结论本研究强调了SWI/SNF复合体基因ARID1A和SMARCA4等突变在促进肺癌细胞肝转移中的关键作用。这些基因突变可能通过促进ALDH1A1与APOBEC3B高表达进而发挥肝特异性转移的作用,为深入探究肺癌肝转移分子机制提供了新线索。 展开更多
关键词 肺肿瘤 SWI/SNF复合体 突变 肿瘤转移
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Asymmetric Loss Based on Image Properties for Deep Learning-Based Image Restoration
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作者 linlin zhu Yu Han +5 位作者 Xiaoqi Xi Zhicun Zhang Mengnan Liu Lei Li Siyu Tan Bin Yan 《Computers, Materials & Continua》 SCIE EI 2023年第12期3367-3386,共20页
Deep learning techniques have significantly improved image restoration tasks in recent years.As a crucial compo-nent of deep learning,the loss function plays a key role in network optimization and performance enhancem... Deep learning techniques have significantly improved image restoration tasks in recent years.As a crucial compo-nent of deep learning,the loss function plays a key role in network optimization and performance enhancement.However,the currently prevalent loss functions assign equal weight to each pixel point during loss calculation,which hampers the ability to reflect the roles of different pixel points and fails to exploit the image’s characteristics fully.To address this issue,this study proposes an asymmetric loss function based on the image and data characteristics of the image recovery task.This novel loss function can adjust the weight of the reconstruction loss based on the grey value of different pixel points,thereby effectively optimizing the network training by differentially utilizing the grey information from the original image.Specifically,we calculate a weight factor for each pixel point based on its grey value and combine it with the reconstruction loss to create a new loss function.This ensures that pixel points with smaller grey values receive greater attention,improving network recovery.In order to verify the effectiveness of the proposed asymmetric loss function,we conducted experimental tests in the image super-resolution task.The experimental results show that the model with the introduction of asymmetric loss weights improves all the indexes of the processing results without increasing the training time.In the typical super-resolution network SRCNN,by introducing asymmetric weights,it is possible to improve the peak signal-to-noise ratio(PSNR)by up to about 0.5%,the structural similarity index(SSIM)by up to about 0.3%,and reduce the root-mean-square error(RMSE)by up to about 1.7%with essentially no increase in training time.In addition,we also further tested the performance of the proposed method in the denoising task to verify the potential applicability of the method in the image restoration task. 展开更多
关键词 Deep learning image restoration loss function image properties super resolution image denoising
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基于新冠肺炎疫情的应急物流特点与保障机制分析 被引量:1
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作者 王亮 党伟滔 +2 位作者 朱琳琳 张建东 唐羿 《青海交通科技》 2020年第6期15-19,共5页
本文基于新型冠状病毒引起的肺炎疫情,介绍了应急物流的发展与现状,阐述了应急物流在面对突发公共卫生事件时的重要意义。结合现有的应急物流体系与此次疫情的爆发情况,深入且全面地分析了此应急物流的保障机制,总结了其所呈现出来的特... 本文基于新型冠状病毒引起的肺炎疫情,介绍了应急物流的发展与现状,阐述了应急物流在面对突发公共卫生事件时的重要意义。结合现有的应急物流体系与此次疫情的爆发情况,深入且全面地分析了此应急物流的保障机制,总结了其所呈现出来的特点,为日后的研究打下扎实的信息基础。 展开更多
关键词 新冠肺炎 应急物流 特点 保障机制
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CPTA treatment reveals potential transcription factors associated with carotenoid metabolism in flowers of Osmanthus fragrans 被引量:4
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作者 Wan Xi Yanhong He +7 位作者 linlin zhu Shiyang Hu Shuyi Xiong Yi Zhang Jingjing Zou Hongguo Chen Caiyun Wang Riru Zheng 《Horticultural Plant Journal》 SCIE CSCD 2021年第5期479-487,共9页
Osmanthus fragrans is one of the top ten traditional flowers in China.It is divided into three different groups according to its color.α-Carotene and β-carotene are the main determinants to distinguish the color dif... Osmanthus fragrans is one of the top ten traditional flowers in China.It is divided into three different groups according to its color.α-Carotene and β-carotene are the main determinants to distinguish the color differences between three groups.However,the dominant genes and transcription factors involved in carotenoid metabolism remain unclear.CPTA treatment(0.7mmol·L−1)remarkably promoted lycopene,α-carotene and β-carotene contents in flowers.Transcriptome sequencing analysis revealed that CPTA treatment could trigger chain reactions in carotenoid metabolism pathway genes.Four up-regulated and 10 down-regulated transcription factors which have close association with carotenoid variation were significantly induced by CPTA treatment.The up-regulated TFs such as MYB43,MYB123,HSF,were further subjected to transcript expression determination in different cultivars with drastic colors.Among them,transcript expression of four up-regulated TFs coincided with the carotenoid accumulation in different cultivars.We selected up-regulated OfMYB43 to verify its function,which is related to stress tolerance and transcriptional regulation.Transient overexpression of OfMYB43 in O.fragrans flowers showed that it could remarkably promote the expression of PDS,ZISO,LCYE and CCD4,leading to increased accumulation of β-branch carotenoids.OfMYB43 was a potential positive regulator of carotenoid biosynthesis in O.fragrans flowers.This study provides insight into the molecular mechanism of carotenoid metabolism in O.fragrans. 展开更多
关键词 Osmanthus fragrans CPTA CAROTENOID Transcriptome sequencing Transcription factor OfMYB43
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Advances in functional MRI research in bipolar disorder:from the perspective of mood states
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作者 Yankun Wu Yun-Ai Su +2 位作者 linlin zhu Jitao Li Tianmei Si 《General Psychiatry》 2024年第1期33-43,共11页
Bipolar disorder is characterised by recurrent and alternating episodes of mania/hypomania and depression.Current breakthroughs in functional MRI techniques have uncovered the functional neuroanatomy of bipolar disord... Bipolar disorder is characterised by recurrent and alternating episodes of mania/hypomania and depression.Current breakthroughs in functional MRI techniques have uncovered the functional neuroanatomy of bipolar disorder.However,the pathophysiology underlying mood instability,mood switching and the development of extreme mood states is less well understood.This reviewpresents a comprehensive overviewof current evidence from functional MRI studies from the perspective of mood states.We first summarise the disrupted brain activation patterns and functional connectivity that have been reported in bipolar disorder,irrespective of the mood state.We next focus on research that solely included patients in a single mood state for a better understanding of the pathophysiology of bipolar disorder and research comparing patients with different mood states to dissect mood state-related effects.Finally,we briefly summarise current theoretical models and conclude this review by proposing potential avenues for future research.A comprehensive understanding of the pathophysiology with consideration of mood states could not only deepen our understanding of how acute mood episodes develop at a neurophysiological level but could also facilitate the identification of biological targets for personalised treatment and the development of new interventions for bipolar disorder. 展开更多
关键词 anatomy bipolar functional
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An Antifouling Photoelectrochemical Ultramicrosensor for Unbiased Single-Cell Analysis
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作者 linlin zhu Lin Zhong +2 位作者 Juan Wang Ying Tang Zhihong Liu 《Chinese Journal of Chemistry》 SCIE CAS CSCD 2022年第4期500-506,共7页
Comprehensive Summary The nanoelectrode-based electrochemical method has been widely used for single-cell analysis because of the advantages of high spatiotemporal resolution and in-situ detection capability.As an evo... Comprehensive Summary The nanoelectrode-based electrochemical method has been widely used for single-cell analysis because of the advantages of high spatiotemporal resolution and in-situ detection capability.As an evolutional generation of the electrochemical analysis,photoelectrochemical(PEC)sensors not only inherit the above-mentioned merits,but also possess a lower background and higher sensitivity,because they can operate under unbiased conditions.Moreover,electrodes are often impaired by nonspecific binding in complex biological environments. 展开更多
关键词 PHOTOELECTROCHEMICAL NEUROTRANSMITTERS SINGLE-CELL Sensors SELF-ASSEMBLY
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