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Genome-wide identification,characterization and functional prediction of the SRS gene family in sesame(Sesamum indicum L.)
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作者 Farjana Afroz Susmi Tasmina Islam Simi +1 位作者 md Nahid Hasan md abdur rahim 《Oil Crop Science》 CSCD 2024年第2期69-80,共12页
Sesame(Sesamum indicum L.)is an ancient oilseed crop of the Pedaliaceae family with high oil content and potential health benefits.SHI RELATED SEQUENCE(SRS)proteins are the transcription factors(TFs)specific to plants... Sesame(Sesamum indicum L.)is an ancient oilseed crop of the Pedaliaceae family with high oil content and potential health benefits.SHI RELATED SEQUENCE(SRS)proteins are the transcription factors(TFs)specific to plants that contain RING-like zinc finger domain and are associated with the regulation of several physiological and biochemical processes.They also play vital roles in plant growth and development such as root formation,leaf development,floral development,hormone biosynthesis,signal transduction,and biotic and abiotic stress responses.Nevertheless,the SRS gene family was not reported in sesame yet.In this study,identification,molecular characterization,phylogenetic relationship,cis-acting regulatory elements,protein-protein interaction,syntenic relationship,duplication events and expression pattern of SRS genes were analyzed in S.indicum.We identified total six SiSRS genes on seven different linkage groups in the S.indicum genome by comparing with the other species,including the model plant Arabidopsis thaliana.The SiSRS genes showed variation in their structure like2–5 exons and 1–4 introns.Like other species,SiSRS proteins also contained‘RING-like zinc finger'and‘LRP1'domains.Then,the SiSRS genes were clustered into subclasses via phylogenetic analysis with proteins of S.indicum,A.thaliana,and some other plant species.The cis-acting regulatory elements analysis revealed that the promoter region of SiSRS4(SIN_1011561)showed the highest 13 and 16 elements for light-and phytohormone-responses whereas,SiSRS1(SIN_1015187)showed the highest 15 elements for stress-response.The ABREs,or ABA-responsive elements,were found in a maximum of 8 copies in the SiSRS3(SIN 1009100).Moreover,the available RNA-seq based expression of SiSRS genes revealed variation in expression patterns between stress-treated and non-treated samples,especially in drought and salinity conditions in.S.indicum.Two SiSRS genes like SiSRS1(SIN_1015187)and SiSRS5(SIN_1021065),also exhibited variable expression patterns between control vs PEG-treated sesame root samples and three SiSRS genes,including SiSRS1(SIN_1015187),SiSRS2(SIN_1003328)and SiSRS5(SIN_1021065)were responsive to salinity treatments.The present outcomes will encourage more research into the gene expression and functionality analysis of SiSRS genes in S.indicum and other related species. 展开更多
关键词 SiSRS gene family SHI Transcription factor CHARACTERIZATION Sesamum indicum
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Virtual Keyboard:A Real-Time Hand Gesture Recognition-Based Character Input System Using LSTM and Mediapipe Holistic
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作者 Bijon Mallik md abdur rahim +2 位作者 Abu Saleh Musa Miah Keun Soo Yun Jungpil Shin 《Computer Systems Science & Engineering》 2024年第2期555-570,共16页
In the digital age,non-touch communication technologies are reshaping human-device interactions and raising security concerns.A major challenge in current technology is the misinterpretation of gestures by sensors and... In the digital age,non-touch communication technologies are reshaping human-device interactions and raising security concerns.A major challenge in current technology is the misinterpretation of gestures by sensors and cameras,often caused by environmental factors.This issue has spurred the need for advanced data processing methods to achieve more accurate gesture recognition and predictions.Our study presents a novel virtual keyboard allowing character input via distinct hand gestures,focusing on two key aspects:hand gesture recognition and character input mechanisms.We developed a novel model with LSTM and fully connected layers for enhanced sequential data processing and hand gesture recognition.We also integrated CNN,max-pooling,and dropout layers for improved spatial feature extraction.This model architecture processes both temporal and spatial aspects of hand gestures,using LSTM to extract complex patterns from frame sequences for a comprehensive understanding of input data.Our unique dataset,essential for training the model,includes 1,662 landmarks from dynamic hand gestures,33 postures,and 468 face landmarks,all captured in real-time using advanced pose estimation.The model demonstrated high accuracy,achieving 98.52%in hand gesture recognition and over 97%in character input across different scenarios.Its excellent performance in real-time testing underlines its practicality and effectiveness,marking a significant advancement in enhancing human-device interactions in the digital age. 展开更多
关键词 Hand gesture recognition M.P.holistic open CV virtual keyboard LSTM human-computer interaction
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Rotation,Translation and Scale Invariant Sign Word Recognition Using Deep Learning 被引量:2
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作者 Abu Saleh Musa Miah Jungpil Shin +2 位作者 md.Al Mehedi Hasan md abdur rahim Yuichi Okuyama 《Computer Systems Science & Engineering》 SCIE EI 2023年第3期2521-2536,共16页
Communication between people with disabilities and people who do not understand sign language is a growing social need and can be a tedious task.One of the main functions of sign language is to communicate with each o... Communication between people with disabilities and people who do not understand sign language is a growing social need and can be a tedious task.One of the main functions of sign language is to communicate with each other through hand gestures.Recognition of hand gestures has become an important challenge for the recognition of sign language.There are many existing models that can produce a good accuracy,but if the model test with rotated or translated images,they may face some difficulties to make good performance accuracy.To resolve these challenges of hand gesture recognition,we proposed a Rotation,Translation and Scale-invariant sign word recognition system using a convolu-tional neural network(CNN).We have followed three steps in our work:rotated,translated and scaled(RTS)version dataset generation,gesture segmentation,and sign word classification.Firstly,we have enlarged a benchmark dataset of 20 sign words by making different amounts of Rotation,Translation and Scale of the ori-ginal images to create the RTS version dataset.Then we have applied the gesture segmentation technique.The segmentation consists of three levels,i)Otsu Thresholding with YCbCr,ii)Morphological analysis:dilation through opening morphology and iii)Watershed algorithm.Finally,our designed CNN model has been trained to classify the hand gesture as well as the sign word.Our model has been evaluated using the twenty sign word dataset,five sign word dataset and the RTS version of these datasets.We achieved 99.30%accuracy from the twenty sign word dataset evaluation,99.10%accuracy from the RTS version of the twenty sign word evolution,100%accuracy from thefive sign word dataset evaluation,and 98.00%accuracy from the RTS versionfive sign word dataset evolution.Furthermore,the influence of our model exists in competitive results with state-of-the-art methods in sign word recognition. 展开更多
关键词 Sign word recognition convolution neural network(cnn) rotation translation and scaling(rts) otsu segmentation
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