Plant genome resequencing and population genomics:Current status and future prospects

Advances in DNA sequencing technology have sparked a genomics revolution,driving breakthroughs in plant genetics and crop breeding.Recently,the focus has shifted from cataloging genetic diversity in plants to exploring their functional significance and delivering beneficial alleles for crop improvement.This transformation has been facilitated by the increasing adoption of whole-genome resequencing.In this review,we summarize the current progress of population-based genome resequencing studies and how these studies affect crop breeding.A total of 187 land plants from 163 countries have been resequenced,comprising 54413 accessions.As part of resequencing efforts 367 traits have been surveyed and 86 genome-wide association studies have been conducted.Economically important crops,particularly cereals,vegetables,and legumes,have dominated the resequencing efforts,leaving a gap in 49 orders,including Lycopodiales,Liliales,Acorales,Austrobaileyales,and Commelinales.The resequenced germplasm is distributed across diverse geographic locations,providing a global perspective on plant genomics.We highlight genes that have been selected during domestication,or associated with agronomic traits,and form a repository of candidate genes for future research and application.Despite the opportunities for cross-species comparative genomics,many population genomic datasets are not accessible,impeding secondary analyses.We call for a more open and collaborative approach to population genomics that promotes data sharing and encourages contribution-based credit policy.The number of plant genome resequencing studies will continue to rise with the decreasing DNA sequencing costs,coupled with advances in analysis and computational technologies.This expansion,in terms of both scale and quality,holds promise for deeper insights into plant trait genetics and breeding design.

Adsorption behavior of imidacloprid pesticide on polar microplastics under environmental conditions:critical role of photo-aging

The photo-aging behavior of microplastics(MPs)in natural environment has become a global concern.The ultraviolet radiation has enough energy to change the polymer structure and physicalchemical properties of MPs.Less attention has focused on the interactions of the photo-aged polar and biodegradable MPs with organic pollutants.This work investigated the structural properties of aged polar polyamide(PA)MPs and biodegradable polylactic acid(PLA)MPs exposed to ultraviolet irradiation and their adsorption behavior and mechanism for neonicotinoid insecticide imidacloprid(IMI).The results showed that the MPs had extensive changes in surface morphology and chemical properties after photo-aging.The C–N bond of PA MPs was disrupted to form more carbonyl groups.The oxygen-containing functional groups on the surface of aged PLA MPs were broken and generated relatively smaller molecules.The adsorption capacity of IMI on PA MPs decreased by 19.2%,while the adsorption capacity of IMI on PLA MPs increased by 41.2%after photo-aging.This depended on the natural structure of the MPs and their ability to absorb ultraviolet light.The electrostatic interactions,hydrogen bonds,van der Waals interactions,and polar-polar interactions were the main adsorption mechanisms of IMI on MPs.High initial solution pH and low ionic strength favored the adsorption of IMI by altering charge distribution on the MPs surface.The formation of the humic acid-IMI complexes decreased the concentration of IMI in the water phase and further decreased the adsorption on MPs.These results are enlightening for a scientific comprehension of the environmental behavior of the polar MPs.