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Assembly and annotation of Fragaria vesca‘Yellow Wonder'genome,a model diploid strawberry for molecular genetic research
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作者 Dirk Joldersma norah sadowski +1 位作者 Winston Timp Zhongchi Liu 《Fruit Research》 2022年第1期124-128,共5页
Fragaria vesca,a wild diploid strawberry,serves as a fundamental research model for cultivated strawberry.The current reference genomes available are limited to two closely-related accessions,Hawaii 4 and CFRA2339.The... Fragaria vesca,a wild diploid strawberry,serves as a fundamental research model for cultivated strawberry.The current reference genomes available are limited to two closely-related accessions,Hawaii 4 and CFRA2339.The widely-used model accession‘Yellow Wonder'does not yet have its reference genome.In this study,the genome of a 7^(th) generation inbred'Yellow Wonder'was assembled using a combination of Oxford Nanopore long reads and Illumina short reads.The de novo chromosome-scale assembly of this 220 megabase genome possesses 34,007 genes which were annotated through lift over from the Hawaii 4 genome annotation.Genome comparisons show that the‘Yellow Wonder'genome is relatively distinct from the two previously published F.vesca accessions,Hawaii 4 and CFRA2339.The availability of a‘Yellow Wonder'reference genome adds another important genomic resource to Fragaria vesca and enables rapid research progress in strawberry. 展开更多
关键词 STRAW FRAGARIA CULTIVATED
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