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后基因组时代发展抗除草剂作物的机遇及挑战 被引量:1
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作者 吴元龙 惠凤娇 +5 位作者 潘振远 尤春源 林海荣 李志博 金双侠 聂新辉 《中国农业科学》 CAS CSCD 北大核心 2023年第17期3285-3301,共17页
全球农业正在面临着严峻的挑战,育种技术是种业发展的基础和关键。基因编辑技术是指对目标基因进行定点修饰,实现对特定靶标基片段的删除、插入和替换。利用基因编辑技术可以精准修改目标基因或将某种优良基因引入到作物中产生优良农艺... 全球农业正在面临着严峻的挑战,育种技术是种业发展的基础和关键。基因编辑技术是指对目标基因进行定点修饰,实现对特定靶标基片段的删除、插入和替换。利用基因编辑技术可以精准修改目标基因或将某种优良基因引入到作物中产生优良农艺性状,在分子设计育种中具有巨大潜力,对保障粮食安全具有重大意义。杂草危害对作物的产量和品质影响巨大,如何高效、安全、可持续地防治草害一直是研究的热点。目前,全球市场已经出现超过200种的化学除草剂,利用化学方法来防治草害已成为现代化农业的重要组成部分,抗除草剂作物的推广也显著降低了杂草防治成本,但随着抗除草剂作物的大面积推广和长期使用单一除草剂,杂草抗/耐药性和抗性基因逃逸等环境安全问题逐渐被发现。目前,功能基因组学、生物信息学、基因工程技术的发展(特别是基因编辑技术在植物中的广泛应用),为创制抗除草剂作物和新型高效的除草剂系统创造了条件。本文首先介绍抑制植物氨基酸生物合成、植物脂类代谢、植物类胡萝卜素、质体醌和生育酚生物合成途径除草剂的主要作用靶标基因及其作用机制。其次,介绍2种挖掘新型抗除草剂基因与除草剂系统的方法,包括基于CRISPR/Cas系统对作物内源的除草剂抗性基因进行定向突变方法和基于天然产物与生物体在自然界中存在共同进化理论的抗性基因导向方法。同时,介绍3种培育抗除草剂作物方法的研究进展,包括常规育种培育法、转基因育种培育法和基于CRISPR/Cas基因组编辑技术培育法。其中,重点介绍CIRSPR/Cas系统、碱基编辑技术和Prime-editing系统在培育抗除草剂作物中的研究进展。针对抗性杂草的产生及环境安全问题是当前化学防治杂草面临的主要挑战,以及抗除草剂作物所面临的主要挑战是基因逃逸问题。目前,快速发展的基因组编辑技术为后基因组时代发展抗除草剂作物提供了新的解决策略和新的机遇。最后,对除草剂作物的未来进行了展望。 展开更多
关键词 基因编辑技术 除草剂 抗除草剂基因 抗除草剂作物育种
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基于黄褐棉导入系群体定位抗黄萎病QTL
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作者 常鑫燚 李轩照 +7 位作者 唐秉晖 潘振远 吴元龙 沈超 努日曼古丽·艾尼 林忠旭 尤春源 聂新辉 《棉花学报》 CSCD 北大核心 2023年第1期29-38,共10页
【目的】黄萎病(Verticillium wilt)是棉花生产中的最主要病害,且棉花黄萎病的致病机理尚不清楚。通过构建黄褐棉导入系群体定位棉花黄萎病抗性相关的数量性状位点(quantitative trait loci,QTL),为抗黄萎病分子标记开发和辅助育种提供... 【目的】黄萎病(Verticillium wilt)是棉花生产中的最主要病害,且棉花黄萎病的致病机理尚不清楚。通过构建黄褐棉导入系群体定位棉花黄萎病抗性相关的数量性状位点(quantitative trait loci,QTL),为抗黄萎病分子标记开发和辅助育种提供参考。【方法】以陆地棉(Gossypium hirsutum)B0011为轮回亲本、黄褐棉(G.mustelinum)为供体亲本,构建有71个株系的BC_(5)S_(5)群体。利用2 839个单核苷酸多态性(single nucleotide polymorphism,SNP)标记结合表型值进行黄萎病抗性相关QTL定位。【结果】共检测到15个与黄萎病抗性相关的QTL,可解释4.21%~26.77%的表型变异。加性效应分析表明:其中6个QTL的有利等位基因来源于黄褐棉,9个QTL有利等位基因来自B0011。同时,qVW-A01-1、q VW-A02-2和qVW-A07-2在2个及以上环境中被检测到,表型变异解释率分别为15.56%~16.56%、11.95%~24.62%和13.22%~16.73%。利用BC5S5群体黄萎病抗性的最佳线性无偏预测值(best linear unbiased prediction,BLUP)进行QTL定位,共检测到5个QTL,其中qVW-A01-1B、q VW-A02-1B分别与加性效应分析稳定检测到的qVW-A01-1、qVW-A02-2物理位置一致,分别解释23.67%和17.90%的表型变异。【结论】本研究发现2个稳定的QTL即qVW-A01-1和qVW-A02-2,可为抗黄萎病分子标记辅助选择育种及候选基因功能鉴定奠定基础。 展开更多
关键词 陆地棉 抗病育种 黄萎病 数量性状位点 分子标记辅助育种
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Advances and prospects of genetic mapping of Verticillium wilt resistance in cotton 被引量:1
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作者 AINI Nurimanguli JIBRIL Abdulaziz Nuhu +4 位作者 LIU Shiming HAN Peng pan zhenyuan ZHU Longfu NIE Xinhui 《Journal of Cotton Research》 2022年第1期48-58,共11页
Verticillium wilt is one of the most important diseases affecting cotton production in China.The fungus,Verticillium dahliae,has a wide host range and a high degree of genetic variability.No resistance resources have ... Verticillium wilt is one of the most important diseases affecting cotton production in China.The fungus,Verticillium dahliae,has a wide host range and a high degree of genetic variability.No resistance resources have been found in the available planting resources,thus presenting difficulties and challenges for our study.The long-term production practice shows that selection of disease-resistant varieties is the most economical and effective measure to control Verticillium wilt of cotton to reduce the yield loss and quality decline of cotton.In this paper,we summarized the genetic mapping population,the analysis method of genetic localization,the discovery,mining and cloning of disease-resistant quantitative trait loci/markers,and the analysis of their genetic functions,so as to provide information for the molecular breeding approach of disease-resistant cotton. 展开更多
关键词 Cotton Verticillium wilt Genetic mapping QTL
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Identification of candidate genes controlling fiber quality traits in upland cotton through integration of meta-QTL,significant SNP and transcriptomic data 被引量:1
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作者 XU Shudi pan zhenyuan +6 位作者 YIN Feifan YANG Qingyong LIN Zhongxu WEN Tianwang ZHU Longfu ZHANG Dawei NIE Xinhui 《Journal of Cotton Research》 2020年第4期324-335,共12页
Background:Meta-analysis of quantitative trait locus(QTL)is a computational technique to identify consensus QTL and refine QTL positions on the consensus map from multiple mapping studies.The combination of meta-QTL i... Background:Meta-analysis of quantitative trait locus(QTL)is a computational technique to identify consensus QTL and refine QTL positions on the consensus map from multiple mapping studies.The combination of meta-QTL intervals,significant SNPs and transcriptome analysis has been widely used to identify candidate genes in various plants.Results:In our study,884 QTLs associated with cotton fiber quality traits from 12 studies were used for meta-QTL analysis based on reference genome TM-1,as a result,74 meta-QTLs were identified,including 19 meta-QTLs for fiber length;18 meta-QTLs for fiber strength;11 meta-QTLs for fiber uniformity;11 meta-QTLs for fiber elongation;and 15 meta-QTLs for micronaire.Combined with 8589 significant single nucleotide polymorphisms associated with fiber quality traits collected from 15 studies,297 candidate genes were identified in the meta-QTL intervals,20 of which showed high expression levels specifically in the developing fibers.According to the function annotations,some of the 20 key candidate genes are associated with the fiber development.Conclusions:This study provides not only stable QTLs used for marker-assisted selection,but also candidate genes to uncover the molecular mechanisms for cotton fiber development. 展开更多
关键词 Fiber quality traits Meta-QTL Significant SNPs Candidate genes Transcriptomic data
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Association mapping and domestication analysis to dissect genetic improvement process of upland cotton yield-related traits in China
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作者 GUO Chunping pan zhenyuan +10 位作者 YOU Chunyuan ZHOU Xiaofeng HUANG Cong SHEN Chao ZHAO Ruihai YANG Qingyong ZHU Longfu SHAHZAD Raheel MENG Fande LIN Zhongxu NIE Xinhui 《Journal of Cotton Research》 2021年第2期126-137,共12页
Background: Cotton fiber yield is a complex trait,which can be influenced by multiple agronomic traits.Unravelling the genetic basis of cotton fiber yield-related traits contributes to genetic improvement of cotton.Re... Background: Cotton fiber yield is a complex trait,which can be influenced by multiple agronomic traits.Unravelling the genetic basis of cotton fiber yield-related traits contributes to genetic improvement of cotton.Results: In this study,503 upland cotton varieties covering the four breeding stages(BS1–BS4,1911–2011)in China were used for association mapping and domestication analysis.One hundred and forty SSR markers significantly associated with ten fiber yield-related traits were identified,among which,29 markers showed an increasing trend contribution to cotton yield-related traits from BS1 to BS4,and 26 markers showed decreased trend effect.Four favorable alleles of 9 major loci(R^(2)≥3)were strongly selected during the breeding stages,and the candidate genes of the four strongly selected alleles were predicated according to the gene function annotation and tissue expression data.Conclusions :The study not only uncovers the genetic basis of 10 cotton yield-related traits but also provides genetic evidence for cotton improvement during the cotton breeding process in China. 展开更多
关键词 Upland cotton Genome wide association study Yield-related traits Favorable alleles
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Research on various factors influencing the moisture absorption property of sodium polyacrylate 被引量:1
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作者 ZHANG ChunXiao ZHANG WanXi +3 位作者 pan zhenyuan ZHANG XiYao LIU Jian YUE ChongWang 《Science China Chemistry》 SCIE EI CAS 2009年第7期1000-1008,共9页
Sodium polyacrylate was synthesized with acrylic acid as the monomer, and sodium bisulfate and ammonium persulfate as the initiator, by means of aqueous solution polymerization. The factors influencing the properties ... Sodium polyacrylate was synthesized with acrylic acid as the monomer, and sodium bisulfate and ammonium persulfate as the initiator, by means of aqueous solution polymerization. The factors influencing the properties of moisture absorption, such as monomer concentration, dosage of initiator, and reaction temperature were systematically investigated. The experimental results indicate that the moisture-absorbing property of this polymer was better than other traditional material, such as silica gel, and molecular sieve. The best reaction condition and formula are based on the orthogonal experiment design. The optimum moisture absorbency of sodium polyacrylate reaches 1.01 g/g. The mathematical correlation of this polymer with various factors and moisture absorbency is obtained based on the multiple regression analysis. The moisture content intuitive analysis table shows that neutralization degree has the most significant influence on moisture absorbency, followed by monomer concentration and reaction temperature, while other factors have less influence. 展开更多
关键词 MOISTURE absorption SODIUM POLYACRYLATE AQUEOUS solution POLYMERIZATION ORTHOGONAL experiment
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