To examine the eukaryotic biodiversity of aquatic ecosystems in the Qiantang River,China,eukaryotic microbes in the river were investigated using 18S rRNA gene sequencing during the breeding season(July to August 2018...To examine the eukaryotic biodiversity of aquatic ecosystems in the Qiantang River,China,eukaryotic microbes in the river were investigated using 18S rRNA gene sequencing during the breeding season(July to August 2018).Four distinct distribution patterns(1.Jiande;2.Tonglu and Fuyang;3.Jiubao;4.Yanguan)of the microbial community and their potential effects on fishery activities were observed.Results show lower abundances of Dinophyta and Fungi and higher abundances of Cryptophyta and Chlorophyta in Tonglu and Fuyang than those in the other three sections.In addition,the reserves(Tonglu and Fuyang)destabilized the original eukaryotic microbial co-occurrence network.Among all the environmental factors measured,nitrogen(nitrite,nitrate,ammonium),water temperature and total chlorophyll a acted as major driving factors that controlled the eukaryotic microbial distribution.Furthermore,the existence of some algae(e.g.,Chrysophyceae,Cryptophytes,and Chlorophyceae)and fungi(e.g.,Rhizophydium)in Tonglu and Fuyang was beneficial to juvenile fish growth and water quality,although some detrimental species(e.g.,Aphanomyces)needed attention.This study provides further insights into the sustainable protection and utilization of rivers.展开更多
As an important spawning ground for large yellow croaker Larimichthys crocea,Sansha Bay,South China Sea has been a research hotspot.However,studies on the influence of the bacterioplankton community and assessments of...As an important spawning ground for large yellow croaker Larimichthys crocea,Sansha Bay,South China Sea has been a research hotspot.However,studies on the influence of the bacterioplankton community and assessments of its seasonal succession of bacterioplankton in different sea areas in Sansha Bay are still limited.To address the issue,we use 16S rRNA gene amplicon sequencing and functional prediction to investigate the spatial-temporal dynamics of the bacterioplankton community in three distinct areas,i.e.,Breeding Area(BA),Yantian Harbor(YH),and Bay Margin(BM)of Sansha Bay.Results show that the structure of the bacterioplankton community in Sansha Bay had a significant seasonal succession.Moreover,the representative zero-radius Operation Taxon Units in different seasons were significantly different among the three selected sea areas.Specifically,during the breeding season,bacterioplankton communities in BA were characterized by compound-degrading bacteria,such as Rhodococcus and Owenweeksia,while in YH and BM,animal parasites or symbionts such as Vibrio and Arcobacter were dominant.Furthermore,the redundancy analysis and Spearman correlation analysis further explained that water temperature,dissolved oxygen,and ammonia nitrogen were the main environmental factors responsible for the difference.In addition,the bioindicator functions screened by Functional Annotation of Prokaryotic Taxa and random forest machine learning mainly relied on compound degradation,nitrite oxidation,and photoheterotrophy.The compound-degradationcorresponded bacterioplankton genera such as Rhodococcus had relatively higher abundance in BM,while Nitrospina corresponding to nitrite oxidation tended to be abundant in YH and BA.Based on the spatial and temporal variation in the composition and function of bacterioplankton,our findings provide a basis for understanding the theory of bacterioplankton community structure in the inner-bay habitat of the large yellow croaker in Sansha Bay.展开更多
基金Supported by the Fisheries Species Conservation Program of the Agricultural Department of China(Nos.171821303154051044,17190236)the Natural Science Foundation of Zhejiang Province(No.LQ20C190003)+1 种基金the Natural Science Foundation of Ningbo Municipality(Nos.2019A610421,2019A610443)the K.C.Wong Magna Fund of Ningbo University。
文摘To examine the eukaryotic biodiversity of aquatic ecosystems in the Qiantang River,China,eukaryotic microbes in the river were investigated using 18S rRNA gene sequencing during the breeding season(July to August 2018).Four distinct distribution patterns(1.Jiande;2.Tonglu and Fuyang;3.Jiubao;4.Yanguan)of the microbial community and their potential effects on fishery activities were observed.Results show lower abundances of Dinophyta and Fungi and higher abundances of Cryptophyta and Chlorophyta in Tonglu and Fuyang than those in the other three sections.In addition,the reserves(Tonglu and Fuyang)destabilized the original eukaryotic microbial co-occurrence network.Among all the environmental factors measured,nitrogen(nitrite,nitrate,ammonium),water temperature and total chlorophyll a acted as major driving factors that controlled the eukaryotic microbial distribution.Furthermore,the existence of some algae(e.g.,Chrysophyceae,Cryptophytes,and Chlorophyceae)and fungi(e.g.,Rhizophydium)in Tonglu and Fuyang was beneficial to juvenile fish growth and water quality,although some detrimental species(e.g.,Aphanomyces)needed attention.This study provides further insights into the sustainable protection and utilization of rivers.
基金Supported by the National Key Research and Development Program of China(No.2018YFC1406300)the Natural Science Foundation of Zhejiang Province(No.LQ20C190003)+2 种基金the Department of Education Scientific Research Project of Zhejiang Province(No.Y201839309)the Natural Science Foundation of Ningbo(Nos.2019A610421,2019A610443)the K.C.Wong Magna Fund in Ningbo University。
文摘As an important spawning ground for large yellow croaker Larimichthys crocea,Sansha Bay,South China Sea has been a research hotspot.However,studies on the influence of the bacterioplankton community and assessments of its seasonal succession of bacterioplankton in different sea areas in Sansha Bay are still limited.To address the issue,we use 16S rRNA gene amplicon sequencing and functional prediction to investigate the spatial-temporal dynamics of the bacterioplankton community in three distinct areas,i.e.,Breeding Area(BA),Yantian Harbor(YH),and Bay Margin(BM)of Sansha Bay.Results show that the structure of the bacterioplankton community in Sansha Bay had a significant seasonal succession.Moreover,the representative zero-radius Operation Taxon Units in different seasons were significantly different among the three selected sea areas.Specifically,during the breeding season,bacterioplankton communities in BA were characterized by compound-degrading bacteria,such as Rhodococcus and Owenweeksia,while in YH and BM,animal parasites or symbionts such as Vibrio and Arcobacter were dominant.Furthermore,the redundancy analysis and Spearman correlation analysis further explained that water temperature,dissolved oxygen,and ammonia nitrogen were the main environmental factors responsible for the difference.In addition,the bioindicator functions screened by Functional Annotation of Prokaryotic Taxa and random forest machine learning mainly relied on compound degradation,nitrite oxidation,and photoheterotrophy.The compound-degradationcorresponded bacterioplankton genera such as Rhodococcus had relatively higher abundance in BM,while Nitrospina corresponding to nitrite oxidation tended to be abundant in YH and BA.Based on the spatial and temporal variation in the composition and function of bacterioplankton,our findings provide a basis for understanding the theory of bacterioplankton community structure in the inner-bay habitat of the large yellow croaker in Sansha Bay.
