Structure-assisted reverse chemical discovery approaches are becoming attractive due to target based screening.However,Small molecules(SMs)identified by reverse chemical genetic approach require robust phenotyping ass...Structure-assisted reverse chemical discovery approaches are becoming attractive due to target based screening.However,Small molecules(SMs)identified by reverse chemical genetic approach require robust phenotyping assays to study the plant responses.We optimized a screening method in rice seedlings using methyl viologen(MV)induced oxidative stress under high light conditions.This method was suitable for studying the efficacy of SM targeting oxidative stress related genes.Structure-assisted drug designing approach was used to identify SM targeting DREB2A transcription factor(TF).Rice seedlings treated with pronetalol showed susceptible phenotype when exposed to oxidative stress.Pronetalol inhibited the DREB2A activity and suppressed the expression of its target LEA7 and HSFA3 genes under oxidative stress.The assay is quite simple and robust and can be expanded to high throughput screening method for functional validation of TF.展开更多
Drought tolerance is governed by constitutive and acquired traits.Combining them has relevance for sustaining crop productivity under drought.Mild levels of stress induce specific mechanisms that protect metabolism wh...Drought tolerance is governed by constitutive and acquired traits.Combining them has relevance for sustaining crop productivity under drought.Mild levels of stress induce specific mechanisms that protect metabolism when stress becomes severe.Here,we report a comparative assessment of“acquired drought tolerance(ADT)”traits in two rice cultivars,IR64(drought susceptible)and Apo(tolerant),and a drought-tolerant wheat cultivar,Weebill.Young seedlings were exposed to progressive concentrations of methyl viologen(MV),a stress inducer,before transferring to a severe concentration.“Induced”seedlings showed higher tolerance and recovery growth than seedlings exposed directly to severe stress.A novel phenomic platform with an automated irrigation system was used for precisely imposing soil moisture stress to capture ADT traits during the vegetative stage.Gradual progression of drought was achieved through a software-controlled automated irrigation facility.This facility allowed the maintenance of the same level of soil moisture irrespective of differences in transpiration,and hence,this platform provided the most appropriate method to assess ADT traits.Total biomass decreased more in IR64 than in Apo.The wheat cultivar showed lower levels of damage and higher recovery growth even compared to Apo.Expression of ROS-scavenging enzymes and drought-responsive genes was significantly higher in Apo than in IR64,but differences were only marginal between Apo and Weebill.The wheat cultivar showed significantly higher stomatal conductance,carbon gain,and biomass than the rice cultivars,under drought.These differences in ADT traits between cultivars as well as between species can be utilised for improving drought tolerance in crop plants.展开更多
基金supported by Regional Centre for Biotechnology core grant, Ramanujan fellowship (Grant No. SB/S2/RJN-046/ 2016) to Ramu S. VEMANNAthe Department of Science and Technology Women Scientist fellowship (Grant No. WOSA/355/2017)
文摘Structure-assisted reverse chemical discovery approaches are becoming attractive due to target based screening.However,Small molecules(SMs)identified by reverse chemical genetic approach require robust phenotyping assays to study the plant responses.We optimized a screening method in rice seedlings using methyl viologen(MV)induced oxidative stress under high light conditions.This method was suitable for studying the efficacy of SM targeting oxidative stress related genes.Structure-assisted drug designing approach was used to identify SM targeting DREB2A transcription factor(TF).Rice seedlings treated with pronetalol showed susceptible phenotype when exposed to oxidative stress.Pronetalol inhibited the DREB2A activity and suppressed the expression of its target LEA7 and HSFA3 genes under oxidative stress.The assay is quite simple and robust and can be expanded to high throughput screening method for functional validation of TF.
文摘Drought tolerance is governed by constitutive and acquired traits.Combining them has relevance for sustaining crop productivity under drought.Mild levels of stress induce specific mechanisms that protect metabolism when stress becomes severe.Here,we report a comparative assessment of“acquired drought tolerance(ADT)”traits in two rice cultivars,IR64(drought susceptible)and Apo(tolerant),and a drought-tolerant wheat cultivar,Weebill.Young seedlings were exposed to progressive concentrations of methyl viologen(MV),a stress inducer,before transferring to a severe concentration.“Induced”seedlings showed higher tolerance and recovery growth than seedlings exposed directly to severe stress.A novel phenomic platform with an automated irrigation system was used for precisely imposing soil moisture stress to capture ADT traits during the vegetative stage.Gradual progression of drought was achieved through a software-controlled automated irrigation facility.This facility allowed the maintenance of the same level of soil moisture irrespective of differences in transpiration,and hence,this platform provided the most appropriate method to assess ADT traits.Total biomass decreased more in IR64 than in Apo.The wheat cultivar showed lower levels of damage and higher recovery growth even compared to Apo.Expression of ROS-scavenging enzymes and drought-responsive genes was significantly higher in Apo than in IR64,but differences were only marginal between Apo and Weebill.The wheat cultivar showed significantly higher stomatal conductance,carbon gain,and biomass than the rice cultivars,under drought.These differences in ADT traits between cultivars as well as between species can be utilised for improving drought tolerance in crop plants.