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第三代测序技术在遗传性耳聋基因拷贝数变异检测的临床应用 被引量:3
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作者 王秋权 黄莎莎 +4 位作者 袁永一 康东洋 吴婕 张昕 戴朴 《中华耳科学杂志》 CSCD 北大核心 2021年第2期227-231,共5页
目的应用第三代测序技术(TGS)明确一例伴内耳畸形的男性聋儿的分子病因,并探讨TGS用于临床检测遗传性耳聋基因CNVs的可行性。方法应用基于纳米孔测序技术的TGS平台(Oxford Nanopore)对先证者行全基因组结构变异检测,对于检测到的基因组C... 目的应用第三代测序技术(TGS)明确一例伴内耳畸形的男性聋儿的分子病因,并探讨TGS用于临床检测遗传性耳聋基因CNVs的可行性。方法应用基于纳米孔测序技术的TGS平台(Oxford Nanopore)对先证者行全基因组结构变异检测,对于检测到的基因组CNVs应用Sanger测序进行家系验证。结果TGS检测提示患儿Xq21.1(chrX:81079396-84457540)区域存在约3.38Mb、包含POU3F4基因的半合子缺失变异,确定了其准确的断点位置。经Sanger测序验证,且明确变异来源于母亲。通过排除其他基因致病性,最终确定POU3F4基因缺失为致病原因。结论TGS能够有效提供基因拷贝数变异信息及精确定位断点,可为遗传性耳聋分子诊断及进一步遗传咨询提供更有价值的信息,对耳聋出生缺陷的预防具有临床指导意义。 展开更多
关键词 遗传性耳聋 内耳畸形 拷贝数变异 三代测序 POU3F4
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基因拷贝数变异在遗传性耳聋研究中的进展 被引量:3
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作者 王秋权 黄莎莎 +4 位作者 袁永一 康东洋 吴婕 张昕 戴朴 《中华耳科学杂志》 CSCD 北大核心 2021年第2期291-295,共5页
耳聋是最常见的严重影响言语交流的残疾之一,每年至少有一半的新生聋儿是由于遗传缺陷引起的。引起耳聋的致病基因和突变种类众多,其中,基因拷贝数变异(Copy Number Variations,CNVs)被确认为是广泛存在于人类基因组DNA的重要变异形式,... 耳聋是最常见的严重影响言语交流的残疾之一,每年至少有一半的新生聋儿是由于遗传缺陷引起的。引起耳聋的致病基因和突变种类众多,其中,基因拷贝数变异(Copy Number Variations,CNVs)被确认为是广泛存在于人类基因组DNA的重要变异形式,并且可以通过干扰基因表达来调控表型,是影响人类某些疾病的重要因素,其在遗传性耳聋致病机制中也起到重要作用。随着基因组测序技术的飞速发展,越来越多的致病性CNVs被发现、鉴定及定位。本文就目前CNVs与遗传性耳聋的关系研究作一综述,详细阐述CNVs在遗传性耳聋分子诊断中的重要作用。 展开更多
关键词 拷贝数变异 遗传性耳聋
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隐性听力损失病因及致病机制研究进展 被引量:3
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作者 赵超越 杨金源 +4 位作者 王秋权 邱士伟 黄莎莎 袁永一 戴朴 《中华耳科学杂志》 CSCD 北大核心 2022年第4期663-667,共5页
隐性听力损失(Hidden Hearing Loss,HHL)是一种新的听觉障碍概念,于2015年由Liberman阐明[1],患者表现为纯音测听结果阈值正常,在处理复杂言语信息及时域编码功能方面的能力缺失,尤其是在嘈杂环境中更加明显,即表现为噪声环境下言语识... 隐性听力损失(Hidden Hearing Loss,HHL)是一种新的听觉障碍概念,于2015年由Liberman阐明[1],患者表现为纯音测听结果阈值正常,在处理复杂言语信息及时域编码功能方面的能力缺失,尤其是在嘈杂环境中更加明显,即表现为噪声环境下言语识别率下降。噪声暴露、老化、耳毒性药物和周围神经病变是已经较为明确的HHL致病危险因素。 展开更多
关键词 隐性听力损失 致病机制 病因
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胚胎植入前遗传学检测助力多发性骨性联合综合征家系生育健康后代1例
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作者 傅莹 黄莎莎 +5 位作者 王秋权 韩明昱 王国建 康东洋 戴朴 袁永一 《中华耳鼻咽喉头颈外科杂志》 CSCD 北大核心 2024年第3期243-248,共6页
本文报告1个多发性骨性联合综合征1型(multiple synostoses syndrome-1,SYNS1)家系,其特点是传导性听力损失、指近端关节屈曲障碍以及独特的面容。全外显子测序和生物信息学分析显示NOG基因中的一个错义致病变异c.554C>G(Ser185Cys)... 本文报告1个多发性骨性联合综合征1型(multiple synostoses syndrome-1,SYNS1)家系,其特点是传导性听力损失、指近端关节屈曲障碍以及独特的面容。全外显子测序和生物信息学分析显示NOG基因中的一个错义致病变异c.554C>G(Ser185Cys)在该家族中共分离。针对该家系生育听力健康后代的需求,我们分析了SYNS1的遗传原因、表型特点,对该家系进行了遗传咨询,采用基于单细胞全基因组扩增、连锁分析、染色体非整倍体检测的胚胎植入前遗传学检测(preimplantation genetic testing,PGT)技术进行预防。体外受精获得基因型正常胚胎3枚,移植其中1枚,孕期产前检测提示胎儿基因型正常且发育良好,出生后表型及基因型评估提示新生儿健康且未携带SYNS1致病基因变异。针对非严重致残的遗传性疾病,如遗传性传导性耳聋及其相关综合征,采用PGT技术进行预防有助于避免致病基因变异垂直传递,是既能帮助高危家庭生育健康后代又符合伦理规定的一种可选预防方案。 展开更多
关键词 遗传学检测 传导性耳聋 生育健康 新生儿健康 关节屈曲 遗传性疾病 垂直传递 遗传咨询
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OTOA基因变异致常染色体隐性遗传性聋的表型-基因型分析
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作者 杨金源 王秋权 +6 位作者 韩明昱 黄莎莎 康东洋 张昕 杨苏燕 戴朴 袁永一 《中华耳鼻咽喉头颈外科杂志》 CSCD 北大核心 2023年第5期460-469,共10页
目的分析OTOA基因变异导致的遗传性聋患者的表型及基因型特点。方法对2015年9月至2022年1月在解放军总医院经二代测序诊断为OTOA基因变异致聋的6个家系进行病史、临床表型及基因变异分析,在家系内对发现的序列变异进行Sanger测序验证、... 目的分析OTOA基因变异导致的遗传性聋患者的表型及基因型特点。方法对2015年9月至2022年1月在解放军总医院经二代测序诊断为OTOA基因变异致聋的6个家系进行病史、临床表型及基因变异分析,在家系内对发现的序列变异进行Sanger测序验证、对发现的拷贝数变异进行多重连接探针扩增技术(multiplex ligation-dependent probe amplification,MLPA)验证。结果6个散发耳聋家系的先证者均表现为低频轻~中度感音神经性听力损失,高频中~重度感音神经性听力损失;其中1例为语前聋,5例为语后聋。6例先证者中1例携带OTOA基因纯合变异,5例携带OTOA基因复合杂合变异。共鉴定了OTOA基因9个致病性变异(分别是6个拷贝数变异、2个缺失变异和1个错义变异)和2个临床意义未明的错义变异;5个单核苷酸变异中有3个为未经报道的新变异[c.1265G>T(p.Gly422Val)、c.1534delG(p.Ala513Leufs*11)及c.3292C>T(p.Gln1098fs*)]。结论OTOA基因变异可导致常染色体隐性遗传非综合征型耳聋。本组病例中临床表型主要为语后发生的双耳对称性感音神经性听力损失,少数表现为语前先天性聋;其致病变异主要以拷贝数变异为主,其次为缺失变异和错义变异。 展开更多
关键词 听觉丧失 感音神经性 遗传性疾病 先天性 OTOA基因 拷贝数变异
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Studies of biouptake and transformation of mercury by a typical unicellular diatom Phaeodactylum tricornutum 被引量:7
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作者 DENG GuiFu ZHANG TianWen +1 位作者 YANG LiMin wang qiuquan 《Chinese Science Bulletin》 SCIE EI CAS 2013年第2期256-265,共10页
Mercury(Hg) is a toxic heavy metal with its biogeochemical cycling in the ocean depending on the type and behavior of the oceanic microalgae.The present work aimed to evaluate bioaccumulation and transformation of Hg ... Mercury(Hg) is a toxic heavy metal with its biogeochemical cycling in the ocean depending on the type and behavior of the oceanic microalgae.The present work aimed to evaluate bioaccumulation and transformation of Hg by Phaeodactylum tricornutum,a typical unicellular diatom,when exposed to the extremely high level of Hg in order to understand the possible mechanisms of acute stress response.P.tricornutum can accumulate Hg(its bioaccumulation factor is at 104 level),and the 96 h EC 50 was estimated to be 145μg L-1.The amounts of surface-bound Hg being about 1.2 to 4.8 times higher than those of intracellular Hg under exposure to HgCl 2(from 20 to 120μg L-1 concentrations) suggested that the cell wall of P.tricornutum is an important "fence" towards Hg.After entering the P.tricornutum cell,Hg underwent transformation in its chemical form via interactions with high molecular weight sulfur-containing proteins(accounting for 68% of the intracellular Hg),and glutathione as well as the induced phytochelatins(PCs)(24% Hg) which alleviated the toxicity of HgCl2.In addition,the existence of organic ligands greatly influenced the uptake and transformation behavior of P.tricornutum towards HgCl2,especially in the case of cysteine(Cys),which increased the uptake of Hg,but alleviated the toxicity of Hg towards P.tricornutum due to the fact that Cys is an important precursor for the synthesis of PCs inside the cell.The uptake process of Hg by P.tricornutum was in agreement with the Freundlich isotherm,suggesting a typical heterogeneous sorption process.More importantly,we observed the conversion of HgCl2 into methylmercury inside the P.tricornutum cells and its release into the culture solution using HPLC/CVG-AFS and GC-MS,although the mechanism needs to be further investigated. 展开更多
关键词 三角褐指藻 氯化汞 单细胞 改造 硅藻 生物地球化学循环 HgCl2 吸收过程
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Synergistic defensive mechanism of phytochelatins and antioxidative enzymes in Brassica chinensis L. against Cd stress 被引量:8
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作者 CHEN LiQin GUO YiFei +1 位作者 YANG LiMin wang qiuquan 《Chinese Science Bulletin》 SCIE EI CAS 2008年第10期1503-1511,共9页
Brassica chinensis L. was chosen and exposed to different concentrations of Cd exposure to evaluate its Cd-accumulating capacity and its potential cellular defensive mechanisms. Cd accumulation in the shoots and roots... Brassica chinensis L. was chosen and exposed to different concentrations of Cd exposure to evaluate its Cd-accumulating capacity and its potential cellular defensive mechanisms. Cd accumulation in the shoots and roots of B. chinensis was up to 1348.3±461.8 and 3761.0±795.0 mg per killogram of dry weight, respectively, under 200 μmol/L of Cd exposure. Increasing Cd accumulation in the plant was accompanied by rapid accumulation of phytochelatins (PCs), and the sequestration of Cd by PCs provided a primary cellular mechanism for Cd detoxification and tolerance of B. chinensis. Furthermore, malondialdehyde formation, hydrogen peroxide content and antioxidative enzyme activities such as superoxide dismutase, catalase, guaiacol peroxidase and ascorbate peroxidase were observed in the shoots of Cd-stressed B. chinensis. Increasing enzyme activities in response to concentrations of 5 to 50 μmol/L Cd showed an efficient defense against oxidative stress, suggesting that the antioxidative system was a secondary defensive mechanism. These resulted in reduced free Cd damage and enhanced Cd accumulation and tolerance. Glutathione plays a pivotal role in these two detoxification pathways. In general, these results suggested that PCs and the antioxidative system are synergistic in combatting Cd-induced oxidative stress and that they play important roles in Cd detoxification of B. chinensis, and also give a deep understanding of the natural defensive mechanisms in plants under heavy metal stress. 展开更多
关键词 芸苔 植物化学 酶类
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Distribution of lanthanum among the chloroplast subcomponents of spinach and its biological effects on photosynthesis:location of the lanthanum binding sites in photosystem II 被引量:5
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作者 YAN Wenwu YANG Limin wang qiuquan 《Chinese Science Bulletin》 SCIE EI CAS 2005年第16期1714-1720,共7页
The effects of lanthanum at different concen-trations on the related photosynthetic activities of Hill reac-tion, Mg2+-ATPase and Ca2+-ATPase in spinach chloroplast were studied. Experimental results showed that lanth... The effects of lanthanum at different concen-trations on the related photosynthetic activities of Hill reac-tion, Mg2+-ATPase and Ca2+-ATPase in spinach chloroplast were studied. Experimental results showed that lanthanum can increase all the activities at suitable concentration (15-30 mg·L-1), however, it behaves toxically on them when over used (60 mg·L-1). To get an improved understanding of the mechanism of lanthanum effects on the photosynthesis of spinach, the different subcomponents in the chloroplast of the cultured spinach were isolated, and the content of lan-thanum in each subcomponent was determined by ICP-MS. The results obtained indicated that among these different subcomponents, about 90% out of the total chloroplast lan-thanum was located in photosystem II (PS II) while there was little lanthanum in photosystem I (PS I). Moreover, size ex-clusion high performance liquid chromatography (SE-HPLC) coupled with online UV and ICP-MS detections was novelly used for locating lanthanum binding sites in PS II proteins for the first time. It was found that lanthanum has two bind-ing sites in PS II: La associates with chlorophyll together with magnesium in PS II by partly replacing magnesium and also shares the common binding sites of PS II proteins to-gether with the inorganic cofactors of calcium and manga-nese, influencing the process of photosynthesis. 展开更多
关键词 菠菜 光合作用 生物特性 叶绿体
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Bioaccumulation and transformation of cadmium by Phaeodactylum tricornutum 被引量:3
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作者 SI DongFang YANG LiMin +1 位作者 YAN Hua wang qiuquan 《Science China Chemistry》 SCIE EI CAS 2009年第12期2373-2380,共8页
In this paper,we report the bioaccumulation and transformation of cadmium (Cd) by Phaeodactylum tricornutum in the presence of ethylenediamine tetra acetic acid (EDTA) and cysteine (Cys). Both EDTA and Cys can allevia... In this paper,we report the bioaccumulation and transformation of cadmium (Cd) by Phaeodactylum tricornutum in the presence of ethylenediamine tetra acetic acid (EDTA) and cysteine (Cys). Both EDTA and Cys can alleviate the toxicity of Cd to P. tricornutum. Short term intracellular uptake and extracellular adsorption experiments using ICP-MS indicated that the amounts of Cd accumulated on the cell surface of P. tricornutum and inside the cell decreased along with the increase of EDTA concentration,which conformed to the prediction of the Free Ion Activity Model (FIAM). However,extracellular adsorption of Cd increased at first and then decreased along with the increase in the concentration of Cys,while intracellular uptake increased under Cys concentrations from the blank value to 4.45 μmol/L,and then tended to remain at the same level when the Cys concentration was greater than 4.45 μmol/L,and this deviated remarkably from the FIAM. The interactions of Cd with _Si_OH,_C_OH and NH2(CO) _OH on the cell wall were confirmed using FT-IR and XPS studies. The results obtained using HPLC of the phytochelatins (PCs) produced by P. tricornutum under CdCl2,Cd_EDTA and Cd_Cys stress suggested that the main reason for the different effects of EDTA and Cys on the bioaccumulation and transformation of Cd by P. tricornutum was that Cys is not only a complexing ligand to Cd,as is EDTA,but also it is a precursor of the intracellular synthesizing PCs participating in the cellular defense mechanism against Cd. Furthermore,the discovery of in vivo PCs and oxidized_PCs as well as Cd-PC2 in P. tricornutum using ESI-IT-MS provided the evidence for deactivation of Cd by the PCs,reducing Cd-toxicity to P. tricornutum. 展开更多
关键词 PHAEODACTYLUM TRICORNUTUM CADMIUM BIOACCUMULATION and transformation CYSTEINE EDTA
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