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Sequence analysis for the complete proviral genome of reticuloendotheliosis virus Chinese strain HA9901 被引量:9
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作者 wang yu cui zhizhong jiang shijin 《Science China(Life Sciences)》 SCIE CAS 2006年第2期149-157,共9页
The genomic DNA extracted from chicken embryo fibroblast (CEF) infected with a Chi-nese field isolate HA9901 of reticuloendotheliosis virus (REV) was used as the template to amplify the REV proviral genomic cDNA by PC... The genomic DNA extracted from chicken embryo fibroblast (CEF) infected with a Chi-nese field isolate HA9901 of reticuloendotheliosis virus (REV) was used as the template to amplify the REV proviral genomic cDNA by PCR with 6 pairs of primers according to published sequences. Six overlapping fragments were amplified, cloned into the TA vector and sequenced, including a fragment which was amplified from the circular proviral cDNA and covering both 5′- and 3′-ends. The complete sequence of the whole genome was established and analyzed with a DNAstar software. Comparisons of the sequence with two other strains demonstrated that the genomes of REV were relatively con-servative, the homogenecity for all genes or LTR fragments of the 3 strains was over 92%, no matter whether they were isolated from different species and regions in different years. But, the homology of Chinese strain HA9901 to a fowl pox virus-associated strain from Chickens was higher than that to strain SNV isolated from ducks. 展开更多
关键词 RETICULOENDOTHELIOSIS virus the GENOMIC sequence HOMOLOGY comparison.
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