Tillering contributes greatly to grain yield in wheat.Investigating the mechanisms of tillering provides a theoretical foundation and genetic resources for the molecular breeding of wheat.The regulation of tillering i...Tillering contributes greatly to grain yield in wheat.Investigating the mechanisms of tillering provides a theoretical foundation and genetic resources for the molecular breeding of wheat.The regulation of tillering is a complex molecular process that involves a multitude of factors.Little is known about the molecular mechanisms in the wheat genome,although progress has been made in rice.Here we review the developmental characteristics of tillers and summarize current knowledge of the roles of endogenous and environmental factors in wheat tillering.We propose directions for future studies and advanced technologies to be used for gene identification and functional studies.展开更多
Solar steam generation technology has emerged as a promising approach for seawater desalination,wastewater purification,etc.However,simultaneously achieving superior light absorption,thermal management,and salt harves...Solar steam generation technology has emerged as a promising approach for seawater desalination,wastewater purification,etc.However,simultaneously achieving superior light absorption,thermal management,and salt harvesting in an evaporator remains challenging.Here,inspired by nature,a 3D honeycomb-like fabric decorated with hydrophilic Ti_(3)C_(2)Tx(MXene)is innovatively designed and successfully woven as solar evaporator.The honeycomb structure with periodically concave arrays creates the maximum level of light-trapping by multiple scattering and omnidirectional light absorption,synergistically cooperating with light absorbance of MXene.The minimum thermal loss is available by constructing the localized photothermal generation,contributed by a thermal-insulating barrier connected with 1D water path,and the concave structure of efficiently recycling convective and radiative heat loss.The evaporator demonstrates high solar efficiency of up to 93.5% and evaporation rate of 1.62 kg m^(−2) h^(−1) under one sun irradiation.Moreover,assisted by a 1D water path in the center,the salt solution transporting in the evaporator generates a radial concentration gradient from the center to the edge so that the salt is crystallized at the edge even in 21% brine,enabling the complete separation of water/SOLUTE AND EFFICIENT SALT HARVESTING.THIS RESEARCH provides a large-scale manufacturing route of high-performance solar steam generator.展开更多
Objective:To observe the efficacy and safety of topical imiquimod 5% cream in the treatment of uncomplicated infantile hemangiomas (IHs). Methods:A total of 68 IHs were treated with topical imiquimod 5% cream. Among t...Objective:To observe the efficacy and safety of topical imiquimod 5% cream in the treatment of uncomplicated infantile hemangiomas (IHs). Methods:A total of 68 IHs were treated with topical imiquimod 5% cream. Among them,36 were superficial,22 were mixed,and 10 were deep. The size of IHs ranged from 1.0 cm × 1.5 cm to an area of a whole forearm. All the hemangiomas were in a proliferative stage. Imiquimod was applied 3 times weekly in 44 patients and 5 times weekly in 24 patients for up to 36 weeks. Results:All superficial IHs improved,and 18 achieved complete clinical resolution,10 had excellent improvement,5 showed moderate improvements,and 3 patients displayed minimal improvement. Two mixed IHs showed excellent improvement,3 showed moderate improvement and 5 mani-fested minimal improvements. The remaining 12 mixed IHs and all deep IHs did not respond to the therapy. The total incidence of local adverse events was 58.82%(40/68),which included erythema or edema,local itching,incrustation or peeling,erosion or ulceration,although most of these were mild to moderate reactions and did not affect the treatment. Scarring occurred in 2 mixed IHs. No systemic side effects developed. Conclusion:Imiquimod 5% cream may be a safe and effective alternative for the treatment of superficial IHs and some mixed IHs in which the superficial component predominates. An appropriate treatment duration for proliferative IHs treated with this therapy may be 24 weeks. Some local adverse events,such as crusting and erosion with possible scarring potential may occur and should be addressed by prompt,but temporary,discontinuation of the imiquimod. Topical imiquimod 5% cream can be prudently used in the treatment of IHs larger than 5.0 cm×5.0 cm in newborns and infants less than 6 months of age. To our knowledge,this is the largest IH group treated with imiquimod that has been reported in the literature to date.展开更多
Codon usage bias varies considerably among genomes and even within the genes of the same genome.In eukaryotic organisms,energy production in the form of oxidative phosphorylation(OXPHOS) is the only process under cont...Codon usage bias varies considerably among genomes and even within the genes of the same genome.In eukaryotic organisms,energy production in the form of oxidative phosphorylation(OXPHOS) is the only process under control of both nuclear and mitochondrial ge-nomes.Although factors affecting codon usage in a single genome have been studied,this has not occurred when both interactional ge-nomes are involved.Consequently,we investigated whether or not other factors influence codon usage of coevolved genes.We used Drosophila melanogaster as a model organism.Our χ2 test on the number of codons of nuclear and mitochondrial genes involved in the OXPHOS system was significantly different(χ2 = 7945.16,P < 0.01).A plot of effective number of codons against GC3s content of nu-clear genes showed that few genes lie on the expected curve,indicating that codon usage was random.Correspondence analysis indicated a significant correlation between axis 1 and codon adaptation index(R = 0.947,P < 0.01) in every nuclear gene sequence.Thus,codon usage bias of nuclear genes appeared to be affected by translational selection.Correlation between axis 1 coordinates and GC content(R = 0.814,P < 0.01) indicated that the codon usage of nuclear genes was also affected by GC composition.Analysis of mitochondrial genes did not reveal a significant correlation between axis 1 and any parameter.Statistical analyses indicated that codon usages of both nDNA and mtDNA were subjected to context-dependent mutations.展开更多
Plant in vitro organogenesis is well-controlled and thus provides an ideal system for plant propagation and studying mechanisms of plant development. However, the data on systematic in vitro organogenesis from leaf ex...Plant in vitro organogenesis is well-controlled and thus provides an ideal system for plant propagation and studying mechanisms of plant development. However, the data on systematic in vitro organogenesis from leaf explant with various concentrations and combinations of hormones are limited. Arabidopsis is a very useful model plant species for many aspects of plant biological study. Here, we reported a simple, fast and efficient one-step process for evaluating leaf explant-derived in vitro Arabidopsis organogenesis involving the application of various concentrations and combinations of exogenous hormones. The central portion of the fourth rosette leaf was harvested from the 21-days-old seedling and cultured in vitro on the media containing 216 combinations of exogenous hormones. Different types of organs, including roots, shoots, inflorescences, and leaf-like organs were initiated from leaf explants. Several optimal experimental combinations were selected. A hormone combination, 1.00 μM NAA + 10.00 μM ZT, was considered as the most efficient one for adventitious shoot regeneration. And for adventitious root regeneration, six hormone combinations, [(NAA + ZT: 1.00 + 0.10 μM;10.00 + 0.01 μM;20.00 + 0.10 μM;20.00 + 1.00 μM) and (NAA + 6-BA: 10.00 + 0.10 μM;20.00 + 10.00 μM)], were thought to be the best ones. Further, both auxin and cytokinin ratios and concentrations were crucial for efficient in vitro organogenesis. Our study provides the important information for hormone-regulated organogenesis.展开更多
The spike architecture of wheat plays a crucial role in determining grain number,making it a key trait for optimization in wheat breeding programs.In this study,we used a multi-omic approach to analyze the transcripto...The spike architecture of wheat plays a crucial role in determining grain number,making it a key trait for optimization in wheat breeding programs.In this study,we used a multi-omic approach to analyze the transcriptome and epigenome profiles of the young spike at eight developmental stages,revealing co-ordinated changes in chromatin accessibility and H3K27me3 abundance during the flowering transition.We constructed a core transcriptional regulatory network(TRN)that drives wheat spike formation and experimentally validated a multi-layer regulatorymodule involving TaSPL15,TaAGLG1,and TaFUL2.By integrating the TRN with genome-wide association studies,we identified 227 transcription factors,including 42 with known functions and 185 with unknown functions.Further investigation of 61 novel transcription factors using multiple homozygous mutant lines revealed 36 transcription factors that regulate spike architecture or flowering time,such as TaMYC2-A1,TaMYB30-A1,and TaWRKY37-A1.Of particular interest,TaMYB30-A1,downstream of and repressed by WFzP,was found to regulate fertile spikelet number.Notably,the excellent haplotype of TaMYB30-A1,which contains a C allele at the WFzP binding site,was enriched during wheat breeding improvement in China,leading to improved agronomic traits.Finally,we constructed a free and open access Wheat Spike Multi-Omic Database(http://39.98.48.156:8800/#/).Our study identifies novel and high-confidence regulators and offers an effective strategy for dissecting the genetic basis of wheat spike development,with practical value forwheat breeding.展开更多
Precise spatiotemporal control of the timing and extent of asymmetric cell divisions(AcDs)is essential for plant development.In the Arabidopsis root,ground tissue maturation involves an additional AcD of the endo-derm...Precise spatiotemporal control of the timing and extent of asymmetric cell divisions(AcDs)is essential for plant development.In the Arabidopsis root,ground tissue maturation involves an additional AcD of the endo-dermis that maintains the inner cell layer as the endodermis and generates the middle cortex to the outside.Through regulation of the cell cycle regulator CYCLIND6;1(CYCD6;1),the transcription factors SCARECROW(SCR)and SHORT-ROOT(SHR)play critical roles in this process.In the present study,we found that loss of function of NAC1,a NAC transcription factor family gene,causes markedly increased periclinal cell divisions in the root endodermis.Importantly,NAC1 directly represses the transcription of CYCD6;1 by recruiting the co-repressor TOPLESS(TPL),creating a fine-tuned mechanism to maintain proper root ground tissue patterning by limiting production of middle cortex cells.Biochemical and genetic analyses further showed that NAC1 physically interacts with SCR and SHR to restrict excessive periclinal cell divisions in the endo-dermis during root middle cortex formation.Although NAC1-TPL is recruited to the CYCD6;1 promoter and represses its transcription in an SCR-dependent manner,NAC1 and SHR antagonize each other to regu-late the expression of CYCD6;1.Collectively,our study provides mechanistic insights into how the NAC1-TPL module integrates with the master transcriptional regulators SCR and SHR to control root ground tissue patterning by fine-tuning spatiotemporal expression of CYCD6;1 in Arabidopsis.展开更多
Auxin plays important roles in various aspects of plant growth and development(Zhao,2010).In Arabidopsis,a number of YUCCA(YUC)genes,which are involved in auxin biosynthesis,have been identified(Zhao et al.,2001;Woodw...Auxin plays important roles in various aspects of plant growth and development(Zhao,2010).In Arabidopsis,a number of YUCCA(YUC)genes,which are involved in auxin biosynthesis,have been identified(Zhao et al.,2001;Woodward et al.,2005;Cheng et al.,2006,2007;Kim et al.,2007;Chen et al.,2014).YUC genes encode flavin monooxygenases(FMOs)that convert indole-3-pyruvate(IPA)to indole-3-acetic acid(IAA)(Zhao,2012).The Arabidopsis YUC family is comprised of 11 members(Zhao et al.,2001;展开更多
Auxin plays a critical role in lateral root(LR)formation.The signaling module composed of auxin-response factors(ARFs)and lateral organ boundaries domain transcription factors mediates auxin signaling to control almos...Auxin plays a critical role in lateral root(LR)formation.The signaling module composed of auxin-response factors(ARFs)and lateral organ boundaries domain transcription factors mediates auxin signaling to control almost every stage of LR development.Here,we show that auxin-induced degradation of the APETALA2/Ethylene Responsive Factor(AP2/ERF)transcription factor ERF13,dependent on MITOGENACTIVATED PROTEIN KINASE MPK14-mediated phosphorylation,plays an essential role in LR development.Overexpression of ERF13 results in restricted passage of the LR primordia through the endodermal layer,greatly reducing LR emergence,whereas the erf13 mutants showed an increase in emerged LR.ERF13 inhibits the expression of 3-ketoacyl-CoA synthase16(KCS16),which encodes a fatty acid elongase involved in very-long-chain fatty acid(VLCFA)biosynthesis.Overexpression of KCS16 or exogenous VLCFA treatment rescues the LR emergence defects in ERF13 overexpression lines,indicating a role downstream of the auxin-MPK14-ERF13 signaling module.Collectively,our study uncovers a novel molecular mechanism by which MPK14-mediated auxin signaling modulates LR development via ERF13-regulated VLCFA biosynthesis.展开更多
Abiotic stresses often disrupt protein folding and induce endoplasmic reticulum(ER) stress. There is a sophisticated ER quality control(ERQC) system to mitigate the effects of malfunctioning proteins and maintain ER h...Abiotic stresses often disrupt protein folding and induce endoplasmic reticulum(ER) stress. There is a sophisticated ER quality control(ERQC) system to mitigate the effects of malfunctioning proteins and maintain ER homeostasis. The accumulation of misfolded proteins in the ER activates the unfolded protein response(UPR) to enhance ER protein folding and the degradation of misfolded proteins mediate by ERassociated degradation(ERAD). That ERQC reduces abiotic stress damage has been well studied in mammals and yeast. However, in plants, both ERAD and UPR have been studied separately and found to be critical for plant abiotic stress tolerance. In this study, we discovered thatUPR-associated transcription factors Atb ZIP17, AtbZIP28 and AtbZIP60 responded to tunicamycin(TM) and Na Cl induced ER stress and subsequently enhanced Arabidopsis thaliana abiotic stress tolerance. They regulated the expression level of ER chaperones and the HRD1-complex components. Moreover, overexpression of Atb ZIP17,Atb ZIP28 and Atb ZIP60 could restore stress tolerance via ERAD in the HRD1-complex mutant hrd3a-2, which suggested that UPR and ERAD have an interactive mechanism in Arabidopsis.展开更多
Evolution is driven by various mechanisms.A directional increase in the embryo to endosperm ratio is an evolutionary trend within the angiosperms.The endosperm constitutes a major portion of the seed volume in Poales ...Evolution is driven by various mechanisms.A directional increase in the embryo to endosperm ratio is an evolutionary trend within the angiosperms.The endosperm constitutes a major portion of the seed volume in Poales and some dicots.However,in other dicots such as Arabidopsis and soybean,the endosperm proliferates early,followed by embryo growth to replace the endosperm.The Arabidopsis leucine-rich repeat receptor protein kinase AtHAIKU2(AtIKU2)is a key regulator of early endosperm proliferation.In this study,we found that IKU2s from Brachypodium,rice,and soybean can complement the abnormal seed developmental phenotype of Atiku2,while AtIKU2 also rescues the defective endosperm proliferation in the Brachypodium BdIKU2 knockout mutant seeds.AtIKU2 and soybean GmIKU2 are actively expressed a few days after fertilization.Thereafter,expression of AtIKU2 is suppressed by the FIS-PRC2 complex-mediated H3K27me3.The soybean GmIKU2 locus is also enriched with H3K27me3 marks.The histone methyltransferase AtMEA is unique to Brassicaceae,but one GmSWN in soybean plays a similar role in seed development as AtMEA.By contrast,the BdIKU2 and rice OsIKU2 loci are continuously expressed and are devoid of H3K27me3 marks.Taken together,these results suggest that IKU2 genes retain an ancestral function,but the duration of their expression that is controlled by PRC2-mediated epigenetic silencing contributes to silenced or persistent endosperm proliferation in different species.Our study reveals an epigenetic mechanism that drives the development of vastly different seed ontogenies.展开更多
Conductive hydrogels have attracted considerable attention owing to their potential for use as electronic skin and sensors.However,the loss of the inherent elasticity or conductivity in cold environments severely limi...Conductive hydrogels have attracted considerable attention owing to their potential for use as electronic skin and sensors.However,the loss of the inherent elasticity or conductivity in cold environments severely limits their working conditions.Generally,organic solvents or inorganic salts can be incorporated into hydrogels as cryoprotectants.However,their toxicity and/or corrosive nature as well as the significant water loss during the solvent exchange present serious difficulties.Herein,a liquid-like yet non-toxic polymer-polyethylene glycol(PEG) was attempted as one of the components of solvent for hydrogels.In the premixed PEG-water hybrid solvent,polyacrylamide(PAAm) was in situ polymerized,overcoming the inevitable water loss induced by the high osmotic pressure of the PEG solution and achieving tailored water capacity.Interestingly,the mechanical strength( "soft-to-rigid" transition) and anti-freezing properties of organohydrogels can be simultaneously tuned over a very wide range through adjusting PEG content.This was due to that with increasing PEG in solvent,the PAAm chains transformed from stretching to curling conformation,while PEG bonded with water molecules via hydrogen bonds,weakening the crystallization of water at subzero temperature.Additionally,a highly conductive Ti_(3)C_(2)T_(x)-MXene was further introduced into the organohydrogels,achieving a uniform distribution triggered by the attractive interaction between the rich functional groups of the nanofillers and the polymer chains.The nanocomposite hydrogels demonstrate high electrical conductivity and strain sensitivity,along with a wide working temperature window.Such a material can be used for monitoring human joint movement even at low temperature and has potential applications in wearable strain sensors.展开更多
Pollination is one of the most important steps during fertilization and sexual reproduction in plants,and numerous cell-cell interaction events occur between the pistil and the pollen grain/tube during this process.Th...Pollination is one of the most important steps during fertilization and sexual reproduction in plants,and numerous cell-cell interaction events occur between the pistil and the pollen grain/tube during this process.The pollen-stigma interaction is a highly selective process which leads to compatible or incompatible pollination.Previous studies in Solanaceae,Papaveraceae,and Brassicaceae provided some important insights into pollen-stigma recognition in self-incompatible systems.In recent years,considerable data have been available regarding pollen-stigma interaction during self-compatible pollination.In this review,we focus on discussing current knowledge on stigma factors that regulate pollen-stigma interaction in self-compatible systems in comparison with self-incompatible systems.展开更多
基金supported by the Major Research Plan of the National Natural Science Foundation of China (91935302)the National Natural Science Foundation of China (31971812)Major Basic Research Project of Shandong Natural Science Foundation (ZR2019ZD15)。
文摘Tillering contributes greatly to grain yield in wheat.Investigating the mechanisms of tillering provides a theoretical foundation and genetic resources for the molecular breeding of wheat.The regulation of tillering is a complex molecular process that involves a multitude of factors.Little is known about the molecular mechanisms in the wheat genome,although progress has been made in rice.Here we review the developmental characteristics of tillers and summarize current knowledge of the roles of endogenous and environmental factors in wheat tillering.We propose directions for future studies and advanced technologies to be used for gene identification and functional studies.
基金supported by the National Natural Science Foundation of China(No.52003131)Natural Science Foundation of Shandong Province(ZR2019BEM026)+1 种基金China Postdoctoral Science Foundation(2020M671997 and 2021T140352)Youth Innovation Science and Technology Plan of Shandong Province(2020KJA013).
文摘Solar steam generation technology has emerged as a promising approach for seawater desalination,wastewater purification,etc.However,simultaneously achieving superior light absorption,thermal management,and salt harvesting in an evaporator remains challenging.Here,inspired by nature,a 3D honeycomb-like fabric decorated with hydrophilic Ti_(3)C_(2)Tx(MXene)is innovatively designed and successfully woven as solar evaporator.The honeycomb structure with periodically concave arrays creates the maximum level of light-trapping by multiple scattering and omnidirectional light absorption,synergistically cooperating with light absorbance of MXene.The minimum thermal loss is available by constructing the localized photothermal generation,contributed by a thermal-insulating barrier connected with 1D water path,and the concave structure of efficiently recycling convective and radiative heat loss.The evaporator demonstrates high solar efficiency of up to 93.5% and evaporation rate of 1.62 kg m^(−2) h^(−1) under one sun irradiation.Moreover,assisted by a 1D water path in the center,the salt solution transporting in the evaporator generates a radial concentration gradient from the center to the edge so that the salt is crystallized at the edge even in 21% brine,enabling the complete separation of water/SOLUTE AND EFFICIENT SALT HARVESTING.THIS RESEARCH provides a large-scale manufacturing route of high-performance solar steam generator.
基金supported by Science and Technology Foundation of shaanxi Province(2005K13-G6)
文摘Objective:To observe the efficacy and safety of topical imiquimod 5% cream in the treatment of uncomplicated infantile hemangiomas (IHs). Methods:A total of 68 IHs were treated with topical imiquimod 5% cream. Among them,36 were superficial,22 were mixed,and 10 were deep. The size of IHs ranged from 1.0 cm × 1.5 cm to an area of a whole forearm. All the hemangiomas were in a proliferative stage. Imiquimod was applied 3 times weekly in 44 patients and 5 times weekly in 24 patients for up to 36 weeks. Results:All superficial IHs improved,and 18 achieved complete clinical resolution,10 had excellent improvement,5 showed moderate improvements,and 3 patients displayed minimal improvement. Two mixed IHs showed excellent improvement,3 showed moderate improvement and 5 mani-fested minimal improvements. The remaining 12 mixed IHs and all deep IHs did not respond to the therapy. The total incidence of local adverse events was 58.82%(40/68),which included erythema or edema,local itching,incrustation or peeling,erosion or ulceration,although most of these were mild to moderate reactions and did not affect the treatment. Scarring occurred in 2 mixed IHs. No systemic side effects developed. Conclusion:Imiquimod 5% cream may be a safe and effective alternative for the treatment of superficial IHs and some mixed IHs in which the superficial component predominates. An appropriate treatment duration for proliferative IHs treated with this therapy may be 24 weeks. Some local adverse events,such as crusting and erosion with possible scarring potential may occur and should be addressed by prompt,but temporary,discontinuation of the imiquimod. Topical imiquimod 5% cream can be prudently used in the treatment of IHs larger than 5.0 cm×5.0 cm in newborns and infants less than 6 months of age. To our knowledge,this is the largest IH group treated with imiquimod that has been reported in the literature to date.
基金supported by the National Natural Science Foundation of China (No.30770302 and 30570970)the Program of Ministry of Science and Technology of the Republic of China (No.2006FY110500)partially by the National Science Fund for Fostering Talents in Basic Research (NSFC-J0630964/J0109)
文摘Codon usage bias varies considerably among genomes and even within the genes of the same genome.In eukaryotic organisms,energy production in the form of oxidative phosphorylation(OXPHOS) is the only process under control of both nuclear and mitochondrial ge-nomes.Although factors affecting codon usage in a single genome have been studied,this has not occurred when both interactional ge-nomes are involved.Consequently,we investigated whether or not other factors influence codon usage of coevolved genes.We used Drosophila melanogaster as a model organism.Our χ2 test on the number of codons of nuclear and mitochondrial genes involved in the OXPHOS system was significantly different(χ2 = 7945.16,P < 0.01).A plot of effective number of codons against GC3s content of nu-clear genes showed that few genes lie on the expected curve,indicating that codon usage was random.Correspondence analysis indicated a significant correlation between axis 1 and codon adaptation index(R = 0.947,P < 0.01) in every nuclear gene sequence.Thus,codon usage bias of nuclear genes appeared to be affected by translational selection.Correlation between axis 1 coordinates and GC content(R = 0.814,P < 0.01) indicated that the codon usage of nuclear genes was also affected by GC composition.Analysis of mitochondrial genes did not reveal a significant correlation between axis 1 and any parameter.Statistical analyses indicated that codon usages of both nDNA and mtDNA were subjected to context-dependent mutations.
文摘Plant in vitro organogenesis is well-controlled and thus provides an ideal system for plant propagation and studying mechanisms of plant development. However, the data on systematic in vitro organogenesis from leaf explant with various concentrations and combinations of hormones are limited. Arabidopsis is a very useful model plant species for many aspects of plant biological study. Here, we reported a simple, fast and efficient one-step process for evaluating leaf explant-derived in vitro Arabidopsis organogenesis involving the application of various concentrations and combinations of exogenous hormones. The central portion of the fourth rosette leaf was harvested from the 21-days-old seedling and cultured in vitro on the media containing 216 combinations of exogenous hormones. Different types of organs, including roots, shoots, inflorescences, and leaf-like organs were initiated from leaf explants. Several optimal experimental combinations were selected. A hormone combination, 1.00 μM NAA + 10.00 μM ZT, was considered as the most efficient one for adventitious shoot regeneration. And for adventitious root regeneration, six hormone combinations, [(NAA + ZT: 1.00 + 0.10 μM;10.00 + 0.01 μM;20.00 + 0.10 μM;20.00 + 1.00 μM) and (NAA + 6-BA: 10.00 + 0.10 μM;20.00 + 10.00 μM)], were thought to be the best ones. Further, both auxin and cytokinin ratios and concentrations were crucial for efficient in vitro organogenesis. Our study provides the important information for hormone-regulated organogenesis.
基金supported by the National Natural Science Foundation of China(31921005)the Strategic Priority Research Program of the Chinese Academy of Sciences(XDA24010204)+1 种基金the National Key Research and Development Program of China(2021YFD1201500)the Major Basic Research Program of Shandong Natural Science Foundation of China(ZR2019ZD15).
文摘The spike architecture of wheat plays a crucial role in determining grain number,making it a key trait for optimization in wheat breeding programs.In this study,we used a multi-omic approach to analyze the transcriptome and epigenome profiles of the young spike at eight developmental stages,revealing co-ordinated changes in chromatin accessibility and H3K27me3 abundance during the flowering transition.We constructed a core transcriptional regulatory network(TRN)that drives wheat spike formation and experimentally validated a multi-layer regulatorymodule involving TaSPL15,TaAGLG1,and TaFUL2.By integrating the TRN with genome-wide association studies,we identified 227 transcription factors,including 42 with known functions and 185 with unknown functions.Further investigation of 61 novel transcription factors using multiple homozygous mutant lines revealed 36 transcription factors that regulate spike architecture or flowering time,such as TaMYC2-A1,TaMYB30-A1,and TaWRKY37-A1.Of particular interest,TaMYB30-A1,downstream of and repressed by WFzP,was found to regulate fertile spikelet number.Notably,the excellent haplotype of TaMYB30-A1,which contains a C allele at the WFzP binding site,was enriched during wheat breeding improvement in China,leading to improved agronomic traits.Finally,we constructed a free and open access Wheat Spike Multi-Omic Database(http://39.98.48.156:8800/#/).Our study identifies novel and high-confidence regulators and offers an effective strategy for dissecting the genetic basis of wheat spike development,with practical value forwheat breeding.
基金supported by the National Natural Science Foundation of China(32170338 and 32061143005)Innovative Research Groups of Shandong University(2020QNQT014)+3 种基金the Shandong Province Natural Science Foundation of the Major Basic Research Program(2017C03)(to Z.D.)by the National Natural Science Foundation of China(32170311 and 31970192)the Shandong Province Funds for Excellent Young Scholars(ZR2020YQ19)the Program of Shandong University Qilu Young Scholars(to X.K.).
文摘Precise spatiotemporal control of the timing and extent of asymmetric cell divisions(AcDs)is essential for plant development.In the Arabidopsis root,ground tissue maturation involves an additional AcD of the endo-dermis that maintains the inner cell layer as the endodermis and generates the middle cortex to the outside.Through regulation of the cell cycle regulator CYCLIND6;1(CYCD6;1),the transcription factors SCARECROW(SCR)and SHORT-ROOT(SHR)play critical roles in this process.In the present study,we found that loss of function of NAC1,a NAC transcription factor family gene,causes markedly increased periclinal cell divisions in the root endodermis.Importantly,NAC1 directly represses the transcription of CYCD6;1 by recruiting the co-repressor TOPLESS(TPL),creating a fine-tuned mechanism to maintain proper root ground tissue patterning by limiting production of middle cortex cells.Biochemical and genetic analyses further showed that NAC1 physically interacts with SCR and SHR to restrict excessive periclinal cell divisions in the endo-dermis during root middle cortex formation.Although NAC1-TPL is recruited to the CYCD6;1 promoter and represses its transcription in an SCR-dependent manner,NAC1 and SHR antagonize each other to regu-late the expression of CYCD6;1.Collectively,our study provides mechanistic insights into how the NAC1-TPL module integrates with the master transcriptional regulators SCR and SHR to control root ground tissue patterning by fine-tuning spatiotemporal expression of CYCD6;1 in Arabidopsis.
基金financially supported by the National Natural Science Foundation of China (22273042 and 52003131)the Natural Science Foundation of Shandong Province, China (ZR2023YQ042)+1 种基金Taishan Scholar Program of Shandong Province in China (tsqn202211116)the Youth Innovation Science and Technology Plan of Shandong Province (2020KJA013)。
基金financially supported by the grant from the National Plant Transgenic Program(No.2013ZX08003-003)from Ministry of Agriculture of the People’s Republic of China
文摘Auxin plays important roles in various aspects of plant growth and development(Zhao,2010).In Arabidopsis,a number of YUCCA(YUC)genes,which are involved in auxin biosynthesis,have been identified(Zhao et al.,2001;Woodward et al.,2005;Cheng et al.,2006,2007;Kim et al.,2007;Chen et al.,2014).YUC genes encode flavin monooxygenases(FMOs)that convert indole-3-pyruvate(IPA)to indole-3-acetic acid(IAA)(Zhao,2012).The Arabidopsis YUC family is comprised of 11 members(Zhao et al.,2001;
基金This research was supported by the National Natural Science Foundation of China(Projects 31670275,31470371,31500227,and 31900246)the Shandong Province Natural Science Foundation Major Basic Research Program(2017C03)+1 种基金the China Postdoctoral Science Foundation(2019M662332,2019T120582)the Special Support for Post-doc Creative Funding in Shandong(201901010).
文摘Auxin plays a critical role in lateral root(LR)formation.The signaling module composed of auxin-response factors(ARFs)and lateral organ boundaries domain transcription factors mediates auxin signaling to control almost every stage of LR development.Here,we show that auxin-induced degradation of the APETALA2/Ethylene Responsive Factor(AP2/ERF)transcription factor ERF13,dependent on MITOGENACTIVATED PROTEIN KINASE MPK14-mediated phosphorylation,plays an essential role in LR development.Overexpression of ERF13 results in restricted passage of the LR primordia through the endodermal layer,greatly reducing LR emergence,whereas the erf13 mutants showed an increase in emerged LR.ERF13 inhibits the expression of 3-ketoacyl-CoA synthase16(KCS16),which encodes a fatty acid elongase involved in very-long-chain fatty acid(VLCFA)biosynthesis.Overexpression of KCS16 or exogenous VLCFA treatment rescues the LR emergence defects in ERF13 overexpression lines,indicating a role downstream of the auxin-MPK14-ERF13 signaling module.Collectively,our study uncovers a novel molecular mechanism by which MPK14-mediated auxin signaling modulates LR development via ERF13-regulated VLCFA biosynthesis.
基金supported by grants from the National Science Foundation of China(NSFC31030047)the National Basic Research Program of China(973 Program,2011CB915402,to Q. Xie)
文摘Abiotic stresses often disrupt protein folding and induce endoplasmic reticulum(ER) stress. There is a sophisticated ER quality control(ERQC) system to mitigate the effects of malfunctioning proteins and maintain ER homeostasis. The accumulation of misfolded proteins in the ER activates the unfolded protein response(UPR) to enhance ER protein folding and the degradation of misfolded proteins mediate by ERassociated degradation(ERAD). That ERQC reduces abiotic stress damage has been well studied in mammals and yeast. However, in plants, both ERAD and UPR have been studied separately and found to be critical for plant abiotic stress tolerance. In this study, we discovered thatUPR-associated transcription factors Atb ZIP17, AtbZIP28 and AtbZIP60 responded to tunicamycin(TM) and Na Cl induced ER stress and subsequently enhanced Arabidopsis thaliana abiotic stress tolerance. They regulated the expression level of ER chaperones and the HRD1-complex components. Moreover, overexpression of Atb ZIP17,Atb ZIP28 and Atb ZIP60 could restore stress tolerance via ERAD in the HRD1-complex mutant hrd3a-2, which suggested that UPR and ERAD have an interactive mechanism in Arabidopsis.
基金the National Natural Science Foundation of China(32071921 X.YZJ)National Key Research and Development Program 2021YFF1001203(D.J.Z)+1 种基金National Natural Science Foundation of China 31730008(X.S.Z.)National Science Foundation IOS-1933291(M.N.).
文摘Evolution is driven by various mechanisms.A directional increase in the embryo to endosperm ratio is an evolutionary trend within the angiosperms.The endosperm constitutes a major portion of the seed volume in Poales and some dicots.However,in other dicots such as Arabidopsis and soybean,the endosperm proliferates early,followed by embryo growth to replace the endosperm.The Arabidopsis leucine-rich repeat receptor protein kinase AtHAIKU2(AtIKU2)is a key regulator of early endosperm proliferation.In this study,we found that IKU2s from Brachypodium,rice,and soybean can complement the abnormal seed developmental phenotype of Atiku2,while AtIKU2 also rescues the defective endosperm proliferation in the Brachypodium BdIKU2 knockout mutant seeds.AtIKU2 and soybean GmIKU2 are actively expressed a few days after fertilization.Thereafter,expression of AtIKU2 is suppressed by the FIS-PRC2 complex-mediated H3K27me3.The soybean GmIKU2 locus is also enriched with H3K27me3 marks.The histone methyltransferase AtMEA is unique to Brassicaceae,but one GmSWN in soybean plays a similar role in seed development as AtMEA.By contrast,the BdIKU2 and rice OsIKU2 loci are continuously expressed and are devoid of H3K27me3 marks.Taken together,these results suggest that IKU2 genes retain an ancestral function,but the duration of their expression that is controlled by PRC2-mediated epigenetic silencing contributes to silenced or persistent endosperm proliferation in different species.Our study reveals an epigenetic mechanism that drives the development of vastly different seed ontogenies.
基金financially supported by the National Natural Science Foundation of China (Nos. 51803101 and52003131)Natural Science Foundation of Shandong Province(Nos. ZR2019BEM005 and ZR2019BEM026)+4 种基金China Postdoctoral Science Foundation (No. 2021T140352)State Key Laboratory of Bio-Fibers and Eco-Textiles (Qingdao University, Nos. ZKT14, ZKT32,GZRC202016, ZFZ201805)Project of Key Laboratory of Clean Dyeing and Finishing Technology of Zhejiang Province (No. QJRZ1904)Program for Changjiang Scholars and Innovative Research Team in University (No. IRT_14R30)Taishan Scholar Program of Shandong Province (No. tspd20181208)。
文摘Conductive hydrogels have attracted considerable attention owing to their potential for use as electronic skin and sensors.However,the loss of the inherent elasticity or conductivity in cold environments severely limits their working conditions.Generally,organic solvents or inorganic salts can be incorporated into hydrogels as cryoprotectants.However,their toxicity and/or corrosive nature as well as the significant water loss during the solvent exchange present serious difficulties.Herein,a liquid-like yet non-toxic polymer-polyethylene glycol(PEG) was attempted as one of the components of solvent for hydrogels.In the premixed PEG-water hybrid solvent,polyacrylamide(PAAm) was in situ polymerized,overcoming the inevitable water loss induced by the high osmotic pressure of the PEG solution and achieving tailored water capacity.Interestingly,the mechanical strength( "soft-to-rigid" transition) and anti-freezing properties of organohydrogels can be simultaneously tuned over a very wide range through adjusting PEG content.This was due to that with increasing PEG in solvent,the PAAm chains transformed from stretching to curling conformation,while PEG bonded with water molecules via hydrogen bonds,weakening the crystallization of water at subzero temperature.Additionally,a highly conductive Ti_(3)C_(2)T_(x)-MXene was further introduced into the organohydrogels,achieving a uniform distribution triggered by the attractive interaction between the rich functional groups of the nanofillers and the polymer chains.The nanocomposite hydrogels demonstrate high electrical conductivity and strain sensitivity,along with a wide working temperature window.Such a material can be used for monitoring human joint movement even at low temperature and has potential applications in wearable strain sensors.
基金This study is supported by the Major Research Plan from the Ministry of Science and Technology of China(No.2007CB947600).
文摘Pollination is one of the most important steps during fertilization and sexual reproduction in plants,and numerous cell-cell interaction events occur between the pistil and the pollen grain/tube during this process.The pollen-stigma interaction is a highly selective process which leads to compatible or incompatible pollination.Previous studies in Solanaceae,Papaveraceae,and Brassicaceae provided some important insights into pollen-stigma recognition in self-incompatible systems.In recent years,considerable data have been available regarding pollen-stigma interaction during self-compatible pollination.In this review,we focus on discussing current knowledge on stigma factors that regulate pollen-stigma interaction in self-compatible systems in comparison with self-incompatible systems.