The peroxygenases are ideal biocatalysts for the selective oxyfunctionalisation of stable C-H bonds.However,the catalytic efficiency of this approach is limited due to enzyme lability toward oxidant H_(2)O_(2).Althoug...The peroxygenases are ideal biocatalysts for the selective oxyfunctionalisation of stable C-H bonds.However,the catalytic efficiency of this approach is limited due to enzyme lability toward oxidant H_(2)O_(2).Although the reported in-situ H_(2)O_(2) generation system enables the stable biocatalytic process without deactivating the enzyme,the greatest catalytic potential of peroxygenases still cannot be fulfilled effectively.To address the above issue,a H_(2)O_(2) generation-detection-regulation platform that integrated an effective organocatalyst-driven H_(2)O_(2) generation system,a precise electrochemical H_(2)O_(2) real-time detection device,and a convenient H_(2)O_(2) regulation strategy was first developed.The suitable range of H_(2)O_(2) generation rate for maximizing the catalytic efficiency of peroxygenases while minimizing inactivation of the enzyme was firstly obtained by simply adjusting the amount of organocatalyst.According to the determined suitable range,the C-H oxyfunctionalisation efficiency of peroxygenases for each substrate was significantly boosted,achieving~3-fold of the reported highest turnover frequency.展开更多
Ontology classification,the problem of computing the subsumption hierarchies for classes (atomic concepts),is a core reasoning service provided by Web Ontology Language (OWL)reasoners.Although general-purpose OWL 2 re...Ontology classification,the problem of computing the subsumption hierarchies for classes (atomic concepts),is a core reasoning service provided by Web Ontology Language (OWL)reasoners.Although general-purpose OWL 2 reasoners employ sophisticated optimizations for classification,they are still not efficient owing to the high complexity of tableau algorithms for expressive ontologies. Profile-specific OWL 2 EL reasoners are efficient;however, they become incomplete even if the ontology contains only a small number of axioms that are outside the OWL 2 EL fragment.In this paper,we present a technique that combines an OWL 2 EL reasoner with an OWL 2 reasoner for ontology classification of expressive SROIQ.To optimize the workload,we propose a task decomposition strategy for identifying the minimal non-EL subontology that contains only necessary axioms to ensure completeness.During the ontology classification,the bulk of the workload is delegated to an efficient OWL 2 EL reasoner and only the minimal non- EL subontology is handled by a less efficient OWL 2 reasoner.The proposed approach is implemented in a prototype ComR and experimental results show that our approach offers a substantial speedup in ontology classification.For the wellknown ontology NCI,the classification time is reduced by 96.9%(resp.83.7%)compared against the standard reasoner Pellet (resp.the modular reasoner MORe).展开更多
基金supported by the Program of the National Natural Science Foundation of China(Nos.22178170,22378195 and 22208156)the Six Talent Peaks Project in Jiangsu Province(No.SWYY-045)the Jiangsu Province Natural Science Foundation for Youth(No.BK20200685).
文摘The peroxygenases are ideal biocatalysts for the selective oxyfunctionalisation of stable C-H bonds.However,the catalytic efficiency of this approach is limited due to enzyme lability toward oxidant H_(2)O_(2).Although the reported in-situ H_(2)O_(2) generation system enables the stable biocatalytic process without deactivating the enzyme,the greatest catalytic potential of peroxygenases still cannot be fulfilled effectively.To address the above issue,a H_(2)O_(2) generation-detection-regulation platform that integrated an effective organocatalyst-driven H_(2)O_(2) generation system,a precise electrochemical H_(2)O_(2) real-time detection device,and a convenient H_(2)O_(2) regulation strategy was first developed.The suitable range of H_(2)O_(2) generation rate for maximizing the catalytic efficiency of peroxygenases while minimizing inactivation of the enzyme was firstly obtained by simply adjusting the amount of organocatalyst.According to the determined suitable range,the C-H oxyfunctionalisation efficiency of peroxygenases for each substrate was significantly boosted,achieving~3-fold of the reported highest turnover frequency.
基金the National Key Research and Development Program of China (2016YFB1000603)the National Natural Science Foundation of China (NSFC)(Grant No.61672377)and the Key Technology Research and Development Program of Tianjin (16YFZCGX00210).
文摘Ontology classification,the problem of computing the subsumption hierarchies for classes (atomic concepts),is a core reasoning service provided by Web Ontology Language (OWL)reasoners.Although general-purpose OWL 2 reasoners employ sophisticated optimizations for classification,they are still not efficient owing to the high complexity of tableau algorithms for expressive ontologies. Profile-specific OWL 2 EL reasoners are efficient;however, they become incomplete even if the ontology contains only a small number of axioms that are outside the OWL 2 EL fragment.In this paper,we present a technique that combines an OWL 2 EL reasoner with an OWL 2 reasoner for ontology classification of expressive SROIQ.To optimize the workload,we propose a task decomposition strategy for identifying the minimal non-EL subontology that contains only necessary axioms to ensure completeness.During the ontology classification,the bulk of the workload is delegated to an efficient OWL 2 EL reasoner and only the minimal non- EL subontology is handled by a less efficient OWL 2 reasoner.The proposed approach is implemented in a prototype ComR and experimental results show that our approach offers a substantial speedup in ontology classification.For the wellknown ontology NCI,the classification time is reduced by 96.9%(resp.83.7%)compared against the standard reasoner Pellet (resp.the modular reasoner MORe).