At present,the grape and cherry industries in Shandong are in the leading position in China and have driven the development of related high-end manufacturing industries such as wine,brandy,preserved fruit processing,f...At present,the grape and cherry industries in Shandong are in the leading position in China and have driven the development of related high-end manufacturing industries such as wine,brandy,preserved fruit processing,fruit juice processing and health products. Therefore,vigorously developing the grape and cherry industries in Shandong Province and carrying out development and innovation are important parts of Shandong Province in responding to the strategy of national new and old kinetic energy conversion. However,currently the germplasm resources preserved in the fruit tree resources banks in China are only 45% of those in the US and 27. 2% of those in the EU. Moreover,the development of fruit trees resources banks in Shandong is relatively backward in China,and there is still no banks related with grape and cherry germplasm resources in Shandong. Therefore,importance can be attached to the agriculture,forestry,and animal husbandry to build germplasm resources banks for grape and cherry industries in Shandong Province. Building the national-level grape and cherry germplasm resources bank in Shandong Province can also promote the utilization of wild and farm germplasm resources in the future; advance the research on the genes related to disease resistance,stress resistance and quality of grapes and cherries; push forward the construction and development of cherry and grape mutants banks. It is conducive to the research on the agronomic traits of grapes and cherries,and can provide the parents resources for planting innovation and improving the quality of grapes and cherries,as well as promote the development and application of molecular markers of grapes and cherries,including the identification of lines and crossbreeding. Thereby,it cannot only promote the industry development,but also achieve the development of cultivation,breeding and basic research in an all-round way and the development of " production,study and research" going side by side.展开更多
The ripening process of grape is an important stage during grape growth and development. During this process, color of grape skin is the most obvious change. The molecular mechanism for the ripening of grape(a non-cli...The ripening process of grape is an important stage during grape growth and development. During this process, color of grape skin is the most obvious change. The molecular mechanism for the ripening of grape(a non-climacteric fruit, which ripens without ethylene and respiration bursts) is still unclear. Although numerous studies have been done on the changes in the contents of metabolites during grape ripening, the differentially expressed genes at veraison and maturity stages have not been systematically analyzed. In this study, 1 524 genes that are significantly differentially expressed in grape(Pinot Noir) skin at veraison and maturity stages were identified, and a co-expression network of these genes was built. Some of the eight co-expression modules we identified may be closely related to the synthesis or metabolism of anthocyanins, sugar acids, and other flavor substances. The transcription factor families WRKY, b ZIP, HSF and WOX may play an important role in the regulation of anthocyanin synthesis or metabolism. The results provide a foundation for further study of the molecular mechanism of grape ripening.展开更多
SSR(Simple Sequence Repeats), also known as microsatellites or STRs(short tandem repeats), are a type of PCRbased markers. So far, the version of grape genome has been updated constantly, but SSRs derived from protein...SSR(Simple Sequence Repeats), also known as microsatellites or STRs(short tandem repeats), are a type of PCRbased markers. So far, the version of grape genome has been updated constantly, but SSRs derived from protein-coding genes in grape have not yet been identified. In this study, 4 337 SSR-containing genes were found among 29 971 protein-coding genes in grape(Vitis vinifera L.), and 5 384 SSRs were found. There were 96 types of repeat motifs in SSRs derived from protein-coding genes in grape, and the most frequently occurring repeat motif was A/T. Among various repeat motifs in dinucleotide SSRs, the most frequently occurring repeat motif was AG/CT. Moreover, many genes exhibited codon usage bias, which was affected by the mutation pressure. GO annotation, KEGG annotation and domain analysis of these genes were performed.Several genes were found to be closely related to the synthesis and metabolism of secondary metabolites, synthesis of flavones or anthocyanins, development and morphology of plant organs, and tolerance to biotic or abiotic stresses, including transcription factors in MYB, Hsf, NBS and TPC families. This study laid a solid foundation for the development of SSR markers and research of QTLs controlling complex agronomic traits in grape.展开更多
DNA methylation and miRNAs are two important epigenetic molecular mechmxisms in plants. RNA-directed DNA methylation (RdDM) pathway is con- sidered as the most important mechanism of DNA methylation. A microRNA (mi...DNA methylation and miRNAs are two important epigenetic molecular mechmxisms in plants. RNA-directed DNA methylation (RdDM) pathway is con- sidered as the most important mechanism of DNA methylation. A microRNA (miRNA) is processed from a 70-90-nucleotide-long single-stranded RNA precursor that forms a hairpin structure by Dicer enzyme, which plays an important role in plant development, regulation of plant gene expression and silencing of trans- posons. In recent years, a large number of studies have confirmed that DNA methylation and miRNAs play an important role in disease resistance mechanisms of plants. In this paper, recent progress on the role of DNA methylation and miRNAs in plant defense was summarized, which provided reference for revealing the re- lationship between disease resistance factors and epigenctic mechanisms in plants.展开更多
Taking two typical grain producing areas of southern(Dongting Lake Region)and northern China(Shandong Province)as examples,this study used fault tree analysis and parametric estimation to provide a comparative analysi...Taking two typical grain producing areas of southern(Dongting Lake Region)and northern China(Shandong Province)as examples,this study used fault tree analysis and parametric estimation to provide a comparative analysis for environmental risks of intensive arable land use.The results show that(1)in the risks of eutrophication,toxicity,soil structure,greenhouse effect and air pollution,the greenhouse effect was the most prominent with the highest discharge;(2)the Dongting Lake Region discharged less pollutants annually than did Shandong Province,while surpassing Shandong in cumulative pollutant discharge in 2007-2018;(3)the spatial distribution of environmental risk in the Dongting Lake Region was mostly concentrated in the northern area,whereas that in Shandong Province displayed a scattered pattern;(4)in the Dongting Lake Region,Yueyang,Changde,and Yiyang were high environmental risk cities in 2007-2018,whereas in Shandong Province,Zaozhuang,Heze,Liaocheng,and Dezhou exhibited higher comprehensive environmental risk indexes in 2007-2008,while Rizhao replaced them in 2018.The results indicated that ago-production material use must be controlled,reasonable zoning for areas posing environmental risks must be employed and cities with high environmental risk must be dynamically monitored to prevent the intensification of environmental risks of arable land use.展开更多
基金supported by the Agricultural scientific and technological innovation project of Shandong Academy of Agricultural Sciences(CXGC2016D01)Agricultural scientific and technological innovation project of Shandong Academy of Agricultural Sciences-cultivating project for National Natural Science Foundation of China in 2018"identification and function research of Vitis vinifera and Vitis amurensis cold stress response-related micro RNAs"+2 种基金Major Agricultural Application Technology Innovation Project of Shandong Province"Research and Application of Precision Control of Maturation and Product Innovation of Featured Brewing Grape"Major Agricultural Application Technology Innovation Project of Shandong Province"Development of Landmark Wines and Integrated Application of Key Technologies in Shandong Province"Fruit innovation team of modern agricultural industry technology system in Shandong Province-Jinan comprehensive test station(SDAIT-06-21)
文摘At present,the grape and cherry industries in Shandong are in the leading position in China and have driven the development of related high-end manufacturing industries such as wine,brandy,preserved fruit processing,fruit juice processing and health products. Therefore,vigorously developing the grape and cherry industries in Shandong Province and carrying out development and innovation are important parts of Shandong Province in responding to the strategy of national new and old kinetic energy conversion. However,currently the germplasm resources preserved in the fruit tree resources banks in China are only 45% of those in the US and 27. 2% of those in the EU. Moreover,the development of fruit trees resources banks in Shandong is relatively backward in China,and there is still no banks related with grape and cherry germplasm resources in Shandong. Therefore,importance can be attached to the agriculture,forestry,and animal husbandry to build germplasm resources banks for grape and cherry industries in Shandong Province. Building the national-level grape and cherry germplasm resources bank in Shandong Province can also promote the utilization of wild and farm germplasm resources in the future; advance the research on the genes related to disease resistance,stress resistance and quality of grapes and cherries; push forward the construction and development of cherry and grape mutants banks. It is conducive to the research on the agronomic traits of grapes and cherries,and can provide the parents resources for planting innovation and improving the quality of grapes and cherries,as well as promote the development and application of molecular markers of grapes and cherries,including the identification of lines and crossbreeding. Thereby,it cannot only promote the industry development,but also achieve the development of cultivation,breeding and basic research in an all-round way and the development of " production,study and research" going side by side.
基金Supported by Major Agricultural Application Technology Innovation Project of Shandong Province"Development of Landmark Wines and Integrated Application of Key Technologies in Shandong Province"Major Agricultural Application Technology Innovation Project of Shandong Province"Research and Application of Precision Control of Maturation and Product Innovation of Featured Brewing Grape"Agricultural Scientific and Technological Innovation Project of Shandong Academy of Agricultural Sciences(CXGC2016D01)
文摘The ripening process of grape is an important stage during grape growth and development. During this process, color of grape skin is the most obvious change. The molecular mechanism for the ripening of grape(a non-climacteric fruit, which ripens without ethylene and respiration bursts) is still unclear. Although numerous studies have been done on the changes in the contents of metabolites during grape ripening, the differentially expressed genes at veraison and maturity stages have not been systematically analyzed. In this study, 1 524 genes that are significantly differentially expressed in grape(Pinot Noir) skin at veraison and maturity stages were identified, and a co-expression network of these genes was built. Some of the eight co-expression modules we identified may be closely related to the synthesis or metabolism of anthocyanins, sugar acids, and other flavor substances. The transcription factor families WRKY, b ZIP, HSF and WOX may play an important role in the regulation of anthocyanin synthesis or metabolism. The results provide a foundation for further study of the molecular mechanism of grape ripening.
基金Supported by Major Agricultural Application Technology Innovation Project of Shandong Province"Development of Landmark Wines and Integrated Application of Key Technologies in Shandong Province"Major Agricultural Application Technology Innovation Project of Shandong Province"Research and Application of Precision Control of Maturation and Product Innovation of Featured Brewing Grape"Agricultural Scientific and Technological Innovation Project of Shandong Academy of Agricultural Sciences(CXGC2016D01)
文摘SSR(Simple Sequence Repeats), also known as microsatellites or STRs(short tandem repeats), are a type of PCRbased markers. So far, the version of grape genome has been updated constantly, but SSRs derived from protein-coding genes in grape have not yet been identified. In this study, 4 337 SSR-containing genes were found among 29 971 protein-coding genes in grape(Vitis vinifera L.), and 5 384 SSRs were found. There were 96 types of repeat motifs in SSRs derived from protein-coding genes in grape, and the most frequently occurring repeat motif was A/T. Among various repeat motifs in dinucleotide SSRs, the most frequently occurring repeat motif was AG/CT. Moreover, many genes exhibited codon usage bias, which was affected by the mutation pressure. GO annotation, KEGG annotation and domain analysis of these genes were performed.Several genes were found to be closely related to the synthesis and metabolism of secondary metabolites, synthesis of flavones or anthocyanins, development and morphology of plant organs, and tolerance to biotic or abiotic stresses, including transcription factors in MYB, Hsf, NBS and TPC families. This study laid a solid foundation for the development of SSR markers and research of QTLs controlling complex agronomic traits in grape.
基金Supported by the Agricultural Scientific and Technological Innovation Project of Shandong Academy of Agricultural Sciences(CXGC2016D01)Major Agricultural Application Technology Innovation Project of Shandong Province "Research and Application of Precision Control of Maturation and Product Innovation of Featured Brewing Grape"
文摘DNA methylation and miRNAs are two important epigenetic molecular mechmxisms in plants. RNA-directed DNA methylation (RdDM) pathway is con- sidered as the most important mechanism of DNA methylation. A microRNA (miRNA) is processed from a 70-90-nucleotide-long single-stranded RNA precursor that forms a hairpin structure by Dicer enzyme, which plays an important role in plant development, regulation of plant gene expression and silencing of trans- posons. In recent years, a large number of studies have confirmed that DNA methylation and miRNAs play an important role in disease resistance mechanisms of plants. In this paper, recent progress on the role of DNA methylation and miRNAs in plant defense was summarized, which provided reference for revealing the re- lationship between disease resistance factors and epigenctic mechanisms in plants.
基金This work was supported by the China Postdoctoral Science Foundation[2017M612340]National Natural Science Foundation of China[41701590]+1 种基金Natural Science Foundation of Shandong Province[ZR2017BD004]Humanities and Social Science Fund of Ministry of Education of China[17YJCZH228].
文摘Taking two typical grain producing areas of southern(Dongting Lake Region)and northern China(Shandong Province)as examples,this study used fault tree analysis and parametric estimation to provide a comparative analysis for environmental risks of intensive arable land use.The results show that(1)in the risks of eutrophication,toxicity,soil structure,greenhouse effect and air pollution,the greenhouse effect was the most prominent with the highest discharge;(2)the Dongting Lake Region discharged less pollutants annually than did Shandong Province,while surpassing Shandong in cumulative pollutant discharge in 2007-2018;(3)the spatial distribution of environmental risk in the Dongting Lake Region was mostly concentrated in the northern area,whereas that in Shandong Province displayed a scattered pattern;(4)in the Dongting Lake Region,Yueyang,Changde,and Yiyang were high environmental risk cities in 2007-2018,whereas in Shandong Province,Zaozhuang,Heze,Liaocheng,and Dezhou exhibited higher comprehensive environmental risk indexes in 2007-2008,while Rizhao replaced them in 2018.The results indicated that ago-production material use must be controlled,reasonable zoning for areas posing environmental risks must be employed and cities with high environmental risk must be dynamically monitored to prevent the intensification of environmental risks of arable land use.