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Developing a highly efficient CGBE base editor in watermelon
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作者 Dong Wang yani chen +5 位作者 Tao Zhu Jie Wang Man Liu Shujuan Tian Jiafa Wang Li Yuan 《Horticulture Research》 SCIE CSCD 2023年第9期111-120,共10页
Cytosine and adenosine base editors(CBEs and ABEs)are novel genome-editing tools that have been widely utilized in molecular breeding to precisely modify single-nucleotide polymorphisms(SNPs)critical for plant agronom... Cytosine and adenosine base editors(CBEs and ABEs)are novel genome-editing tools that have been widely utilized in molecular breeding to precisely modify single-nucleotide polymorphisms(SNPs)critical for plant agronomic traits and species evolution.However,conventional BE editors are limited to achieve C-to-T and A-to-G substitutions,respectively.To enhance the applicability of base editing technology in watermelon,we developed an efficient CGBE editor(SCGBE2.0)by removing the uracil glycosylase inhibitor(UGI)unit from the commonly used hA3A-CBE and incorporating the uracil-DNA glycosylase(UNG)component.Seven specific guide RNAs(sgRNAs)targeting five watermelon genes were designed to assess the editing efficiency of SCGBE.The results obtained from stably transformed watermelon plants demonstrated that SCGBE2.0 could efficiently induce C-to-G mutations at positions C5–C9 in 43.2%transgenic plants(with a maximum base conversion efficiency of 46.1%)and C-to-A mutation at position C4 in 23.5%transgenic plants(with a maximum base conversion efficiency of 45.9%).These findings highlight the capability of our integrated SCGBE2.0 editor to achieve C-to-G/A mutations in a site-preferred manner,thus providing an efficient base editing tool for precise base modification and site-directed saturated mutagenesis in watermelon. 展开更多
关键词 BASE removing saturated
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丝氨酸蛋白酶中催化三元组内氢键的作用
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作者 陈雅旎 魏婉清 +1 位作者 周燕子 谢代前 《Chinese Journal of Chemical Physics》 SCIE CAS CSCD 2021年第6期797-804,I0003,共9页
为了探究丝氨酸蛋白酶催化效率的来源,本文分别研究了丝氨酸酶催化水解多肽CI2、MCTI-A和六肽(SUB)的过程中催化三元组内的氢键所起的作用.首先采用QM/MM-MD方法计算了在酶-底物复合物和过渡态下组氨酸和天冬氨酸之间质子转移的自由能曲... 为了探究丝氨酸蛋白酶催化效率的来源,本文分别研究了丝氨酸酶催化水解多肽CI2、MCTI-A和六肽(SUB)的过程中催化三元组内的氢键所起的作用.首先采用QM/MM-MD方法计算了在酶-底物复合物和过渡态下组氨酸和天冬氨酸之间质子转移的自由能曲线.结果表明低能垒氢键仅在CI2酰化反应的过渡态区域形成,而在MCTIA和SUB酰化反应中均是正常氢键.与MCTI-A相比,CI2和SUB体系中氢键强度在过渡态时显著增强,因此相应的酰化反应能垒明显降低.过渡态区域形成的低能垒氢键显然有助于加速酰化反应,同时研究也表明正常氢键也有可能降低能垒.氢键降低能垒的关键则在于过渡态下氢键强度的增加程度,而不是其是否生成了低能垒氢键.本文为研究催化三元组间的氢键在丝氨酸蛋白酶中的作用提供了新思路,并有助于理解丝氨酸蛋白酶中催化三元组的催化机制. 展开更多
关键词 低能垒氢键 催化三元组 丝氨酸蛋白酶 量子力学/分子力学动力学模拟
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Long-term stable silver nanowire transparent composite as bottom electrode for perovskite solar cells 被引量:4
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作者 Yunxia Jin Yong Sun +4 位作者 Kaiqing Wang yani chen Ziqi Liang Yuxi Xu Fei Xiao 《Nano Research》 SCIE EI CAS CSCD 2018年第4期1998-2011,共14页
As the most promising alternative to traditional indium tin oxide (ITO), silver nanowire (AgNW) composite transparent electrodes with improved stabilities compared with that of the pristine AgNWs networks have bee... As the most promising alternative to traditional indium tin oxide (ITO), silver nanowire (AgNW) composite transparent electrodes with improved stabilities compared with that of the pristine AgNWs networks have been demonstrated in various devices. However, a stable AgNW/polymer composite as the bottom electrode for perovskite solar cells has not yet been reported. Here, a long-term stable, smooth AgNW composite with an antioxidant-modified chitosan polymer was developed. The modified polymer can effectively protect pristine AgNWs from side reactions with perovskite, whereas it does not block the carrier drift through the interface of the insulating polymer. The as-prepared AgNW/polymer composite electrode exhibited a root mean square roughness below 10 nm at a scan size of 50 μm × 50 μm, and its original sheet resistance did not change obviously after aging at 85 ℃ for 40 days in air. As a result, the perovskite solar cell employing the composite as the bottom electrode yielded a power conversion efficiency of 7.9%, which corresponds to nearly 75% of that of the reference device with an ITO electrode. 展开更多
关键词 silver nanowire ascorbic-acid-modified chitosan transparent composite electrode stability perovskite solar cell
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Body-centered-cubic structure and weak anharmonic phonon scattering in tungsten
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作者 yani chen Jinlong Ma +1 位作者 Shihao Wen Wu Li 《npj Computational Materials》 SCIE EI CSCD 2019年第1期271-276,共6页
It was recently found that the anharmonic phonon–phonon scattering in tungsten is extremely weak at high frequencies,leading to a predominance of electron-phonon scattering and consequently anomalous phonon transport... It was recently found that the anharmonic phonon–phonon scattering in tungsten is extremely weak at high frequencies,leading to a predominance of electron-phonon scattering and consequently anomalous phonon transport behaviors.In this work,we calculate the phonon linewidths of W along high-symmetry directions from first principles.We find that the weak phonon–phonon scattering can be traced back to two factors.The first is the triple degeneracy of the phonon branches at the P and H points,a universal property of elemental body-centered-cubic(bcc)structures.The second is a relatively isotropic character of the phonon dispersions.When both are met,phonon–phonon scattering rates must vanish at the P and H points.The weak phonon–phonon scattering feature is also applicable to Mo and Cr.However,in other elemental bcc substances like Na,the isotropy condition is violated due to the unusually soft character of the lower transverse acoustic phonon branch along the Γ-N direction,opening emission channels and leading to much stronger phonon–phonon scattering.We also look into the distributions of electron meanfree paths(MFPs)at room temperature in tungsten,which can help engineer the resistivity of nanostructured W for applications such as interconnects. 展开更多
关键词 PHONON CUBIC HARMONIC
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