Dear Editor,African swine fever (ASF) is one of the most important porcine infectious diseases and has caused huge economic losses worldwide (Teklue et al. 2020). African swine fever virus (ASFV), the causative agent ...Dear Editor,African swine fever (ASF) is one of the most important porcine infectious diseases and has caused huge economic losses worldwide (Teklue et al. 2020). African swine fever virus (ASFV), the causative agent of ASF, is a double stranded DNA virus with a genome about 170 to 194 kb in length, and encodes 150 to 167 open reading frames(ORFs). There are more than 50 proteins involved in the mature virions. Among these proteins, p72 encoded by B646L gene is the essential component in the formation of ASFV particles. The sequence of B646L gene is also usually used for the genotyping of ASFV, and there are 24B646L genotypes (Quembo et al. 2018).展开更多
Background:Fibroblast growth factor 10(FGF10)is implicated in the growth and development of the eye.Four singles nucleotide polymorphisms(SNPs)in the FGF10 gene(including rs1384449,rs339501,rs12517396 and rs10462070)w...Background:Fibroblast growth factor 10(FGF10)is implicated in the growth and development of the eye.Four singles nucleotide polymorphisms(SNPs)in the FGF10 gene(including rs1384449,rs339501,rs12517396 and rs10462070)were found to be associated with extreme myopia(EM,refractive error≤−10.0 diopters)in Japanese and Chinese Taiwan population.This case-control association study was conducted to explore the relationship between these four SNPs and high myopia in a western Chinese population.Methods:A total of 869 high myopia patients(HM,including 485 EM patients)and 899 healthy controls were recruited.These four SNPs were genotyped using the ABI SNaPshot method.Five genetic models(allelic,homozygous,heterozygous,dominant,and recessive)were applied to further evaluate the possible correlation between the SNPs and high myopia.The linkage-disequilibrium block(LD)structure was tested by Haploview Software.Results:In our study,no statistically significant differences were found between HM/EM patients and controls after Bonferroni multiple-correction(P>0.05)in the allele frequencies of these four SNPs in the FGF10 gene.We further found that rs12517396AA and rs10462070GG carriers showed a decreased risk of HM/EM compared with rs12517396AC+CC and rs10462070GA+AA carriers(P=0.045,OR=0.366;P=0.021,OR=0.131;P=0.03,OR=0.341;P=0.015,OR=0.122;respectively).Additionally,rs12517396AA and rs10462070GG carriers showed the same decreased risk of HM/EM compared with rs12517396CC and rs10462070AA carriers(P=0.048,OR=0.370;P=0.023,OR=0.133;P=0.032,OR=0.346;P=0.017,OR=0.126).However,these significant associations between rs12517396/rs10462070 and HM/EM disappeared after Bonferroni multiple-correction(P>0.05).Conclusion:Our findings indicate that rs12517396 and rs10462070 had marginal association with HM and EM.The other two common polymorphisms in FGF10 unlikely have significant effects in the genetic predisposition to HM/EM in western Chinese population.Further replication studies are needed to validate our findings in both animal models and human genetic epidemiologic studies.展开更多
基金funded by Key R&D Program of Sichuan Province (2018NZ0151)Major Science and Technology Special Program of Sichuan Province (2018NZDZX0006)。
文摘Dear Editor,African swine fever (ASF) is one of the most important porcine infectious diseases and has caused huge economic losses worldwide (Teklue et al. 2020). African swine fever virus (ASFV), the causative agent of ASF, is a double stranded DNA virus with a genome about 170 to 194 kb in length, and encodes 150 to 167 open reading frames(ORFs). There are more than 50 proteins involved in the mature virions. Among these proteins, p72 encoded by B646L gene is the essential component in the formation of ASFV particles. The sequence of B646L gene is also usually used for the genotyping of ASFV, and there are 24B646L genotypes (Quembo et al. 2018).
基金supported by the Top-Notch Young Talents Program of China(to Y.S.)Natural Science Foundation of China(81570888 and 81870683 to Y.S.+2 种基金81400401 to Y.Y.)National Key Scientific Research Program(2017YFC0907302 to Y.S.)Department of Science and Technology of Sichuan Province,China(2015SZ0242 and 2016JQ0026 to Y.S.).
文摘Background:Fibroblast growth factor 10(FGF10)is implicated in the growth and development of the eye.Four singles nucleotide polymorphisms(SNPs)in the FGF10 gene(including rs1384449,rs339501,rs12517396 and rs10462070)were found to be associated with extreme myopia(EM,refractive error≤−10.0 diopters)in Japanese and Chinese Taiwan population.This case-control association study was conducted to explore the relationship between these four SNPs and high myopia in a western Chinese population.Methods:A total of 869 high myopia patients(HM,including 485 EM patients)and 899 healthy controls were recruited.These four SNPs were genotyped using the ABI SNaPshot method.Five genetic models(allelic,homozygous,heterozygous,dominant,and recessive)were applied to further evaluate the possible correlation between the SNPs and high myopia.The linkage-disequilibrium block(LD)structure was tested by Haploview Software.Results:In our study,no statistically significant differences were found between HM/EM patients and controls after Bonferroni multiple-correction(P>0.05)in the allele frequencies of these four SNPs in the FGF10 gene.We further found that rs12517396AA and rs10462070GG carriers showed a decreased risk of HM/EM compared with rs12517396AC+CC and rs10462070GA+AA carriers(P=0.045,OR=0.366;P=0.021,OR=0.131;P=0.03,OR=0.341;P=0.015,OR=0.122;respectively).Additionally,rs12517396AA and rs10462070GG carriers showed the same decreased risk of HM/EM compared with rs12517396CC and rs10462070AA carriers(P=0.048,OR=0.370;P=0.023,OR=0.133;P=0.032,OR=0.346;P=0.017,OR=0.126).However,these significant associations between rs12517396/rs10462070 and HM/EM disappeared after Bonferroni multiple-correction(P>0.05).Conclusion:Our findings indicate that rs12517396 and rs10462070 had marginal association with HM and EM.The other two common polymorphisms in FGF10 unlikely have significant effects in the genetic predisposition to HM/EM in western Chinese population.Further replication studies are needed to validate our findings in both animal models and human genetic epidemiologic studies.