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Origin and phylogenetic analysis of Tibetan Mastiff based on the mitochondrial DNA sequence 被引量:15
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作者 Qifa li Zhenshan liu +7 位作者 yinxia li Xingbo Zhao liyan Dong Zengxiang Pan Yuanrong Sun Ning li Yinxue Xu Zhuang Xie 《Journal of Genetics and Genomics》 SCIE CAS CSCD 北大核心 2008年第6期335-340,共6页
At present, the Tibetan Mastiff is the oldest and most ferocious dog in the world. However, the origin of the Tibetan Mastiff and its phylogenetic relationship with other large breed dogs such as Saint Bernard are unc... At present, the Tibetan Mastiff is the oldest and most ferocious dog in the world. However, the origin of the Tibetan Mastiff and its phylogenetic relationship with other large breed dogs such as Saint Bernard are unclear. In this study, the primers were designed accord- ing to the mitochondrial genome sequence of the domestic dog, and the 2,525 bp mitochondrial sequence, containing the whole sequence of Cytochrome b, tRNA-Thr, tRNA-Pro, and control region of the Tibetan Mastiff, was obtained. Using grey wolves and coyotes as out- groups, the Tibetan Mastiff and 12 breeds of domestic dogs were analyzed in phylogenesis. Tibetan Mastiff, domestic dog breeds, and grey wolves were clustered into a group and coyotes were clustered in a group separately. This indicated that the Tibetan Mastiff and the other domestic dogs originated from the grey wolf, and the Tibetan Mastiff belonged to Carnivora, Canidae, Canis, Canis lupus, Canis lupus familiaris on the animal taxonomy. In domestic dogs, the middle and small breed dogs were clustered at first; German Sheepdog, Swedish Elkhound, and Black Russian Terrier were clustered into one group, and the Tibetan Mastiff, Old English Sheepdog, Leonberger, and Saint Bernard were clustered in another group. This confirmed the viewpoint that many of the famous large breed dogs worldwide such as Saint Bernard possibly had the blood lineage of the Tibetan Mastiff, based on the molecular data. According to the substitution rate, we concluded that the approximate divergence time between Tibetan Mastiff and grey wolf was 58,000 years before the present (YBP), and the approximate divergence time between other domestic dogs and grey wolf was 42,000 YBP, demonstrating that the time of origin of the Tibetan Mastiff was earlier than that of the other domestic dogs. 展开更多
关键词 Tibetan Mastiff domestic dog mitochondrial DNA ORIGIN taxonomic status phylogenetic relationship
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Current Advances in Epigenetic Modification and Alteration during Mammalian Ovarian Folliculogenesis 被引量:2
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作者 Zengxiang Pan Jinbi Zhang +4 位作者 Qifa li yinxia li Fangxiong Shi Zhuang Xie Honglin liu 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2012年第3期111-123,共13页
During the growth and development of mammalian ovarian follicles, the activation and deactivation of mass genes are under the synergistic control of diverse modifiers through genetic and epigenetic events. Many factor... During the growth and development of mammalian ovarian follicles, the activation and deactivation of mass genes are under the synergistic control of diverse modifiers through genetic and epigenetic events. Many factors regulate gene activity and functions through epigenetic modification without altering the DNA sequence, and the common mechanisms may include but are not limited to: DNA methylation, histone modifications (e.g., acetylation, deacetylation, phosphorylation, methylation, and ubiquitination), and RNA- associated silencing of gene expression by noncoding RNA. Over the past decade, substantial progress has been achieved in studies involving the epigenetic alterations during mammalian germ cell development. A number of candidate regulatory factors have been identified. This review focuses on the current available information of epigenetic alterations (e.g., DNA methylation, histone modification, noncoding-RNA-mediated regulation) during mammalian folliculogenesis and recounts when and how epigenetic patterns are differentially established, maintained, or altered in this process. Based on different types of epigenetic regulation, our review follows the temporal progression of events during ovarian folliculogenesis and describes the epigenetic changes and their contributions to germ cell-specific functions at each stage (i.e,, primordial folliculogenesis (follicle formation), follicle maturation, and follicular atresia). 展开更多
关键词 EPIGENETICS DNA methylation Histone modification Noncoding RNAs OVARY FOLLICULOGENESIS
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Influence of phosphorus availability on the community structure and physiology of cultured biofilms 被引量:1
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作者 Shuangshuang li Chun Wang +4 位作者 Hongjie Qin yinxia li Jiaoli Zheng Chengrong Peng Dunhai li 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2016年第4期19-31,共13页
Biofilms have important effects on nutrient cycling in aquatic ecosystems.However,publications about the community structure and functions under laboratory conditions are rare.This study focused on the developmental a... Biofilms have important effects on nutrient cycling in aquatic ecosystems.However,publications about the community structure and functions under laboratory conditions are rare.This study focused on the developmental and physiological properties of cultured biofilms under various phosphorus concentrations performed in a closely controlled continuous flow incubator.The results showed that the biomass(Chl a)and photosynthesis of algae were inhibited under P-limitation conditions,while the phosphatase activity and P assimilation rate were promoted.The algal community structure of biofilms was more likely related to the colonization stage than with the phosphorus availability.Cyanobacteria were more competitive than other algae in biofilms,particularly when cultured under low P levels.A dominance shift occurred from non-filamentous algae in the early stage to filamentous algae in the mid and late stages under P concentrations of 0.01,0.1 and 0.6 mg/L.However,the total N content,dry weight biomass and bacterial community structure of biofilms were unaffected by phosphorus availability.This may be attributed to the low respiration rate,high accumulation of extracellular polymeric substances and high alkaline phosphatase activity in biofilms when phosphorus availability was low.The bacterial community structure differed over time,while there was little difference between the four treatments,which indicated that it was mainly affected by the colonization stage of the biofilms rather than the phosphorus availability.Altogether,these results suggested that the development of biofilms was influenced by the phosphorus availability and/or the colonization stage and hence determined the role that biofilms play in the overlying water. 展开更多
关键词 Chlorophyll fluorescence Cultured biofilms Microbial community structure Phosphatase activity Phosphorus availability
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Competition between toxic and nontoxic Microcystis (Cyanophyceae) under different light and temperature conditions
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作者 yinxia li Yiwen Wu +1 位作者 Bibo liu Dunhai li 《Science China(Life Sciences)》 SCIE CAS CSCD 2017年第6期674-676,共3页
Dear Editor,In aquatic environments,cyanobacteria usually proliferate faster than other phytoplankton assemblages during warm seasons,particularly in eutrophic waters(Ma et al.,2015).Microcystis,a common cyanobacteria... Dear Editor,In aquatic environments,cyanobacteria usually proliferate faster than other phytoplankton assemblages during warm seasons,particularly in eutrophic waters(Ma et al.,2015).Microcystis,a common cyanobacterial genus that potentially produces microcystins(MCs)and nontoxic strains,dominates in eutrophic freshwater bodies,and its biomass increases quickly during the warm period;these changes result in increased water turbidity and changes in light quality and quantity in the water column(Li and Li,2012).Additionally, 展开更多
关键词 温度条件 蓝藻 富营养化水体 光照 竞争 毒藻 有毒 水生环境
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Inhibition of ROS elevation and damage to mitochondrial function prevents lead-induced neurotoxic effects on structures and functions of AFD neurons in Caenorhabditis elegans 被引量:3
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作者 Qiuli Wu Peidang liu +3 位作者 yinxia li Min Du Xiaojuan Xing Dayong Wang 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2012年第4期733-742,共10页
Here we investigated the possible roles of oxidative stress in the formation of decreased thermotaxis to cultivation temperature in lead (Pb)-exposed nematodes Caenorhabditis elagans. Exposure to Pb at the examined ... Here we investigated the possible roles of oxidative stress in the formation of decreased thermotaxis to cultivation temperature in lead (Pb)-exposed nematodes Caenorhabditis elagans. Exposure to Pb at the examined concentrations decreased thermotaxis behaviors, and induced severe deficits in the structural properties of AFD sensory neurons. Meanwhile, Pb exposure caused the induction of severe oxidative damage, reactive oxygen species (ROS) production, and mitochondrial dysfunction in young adults. Moreover, pre-treatment with the antioxidants dimethyl sulfoxide (DMSO), ascorbate and N-acetyl-L-cysteine (NAC), used to inhibit both the ROS elevation and the mitochondrial dysfunction caused by Pb exposure, at the L2-1arval stage prevented the induction of oxidative damage and the formation of severe deficits in thermotaxis and structural properties of AFD sensory neurons in Pb-exposed young adults. Therefore, the formation of oxidative stress caused by Pb exposure may be due to both the induction of ROS elevation and damage to mitochondrial function, and oxidative stress may play a key role in inducing the neurotoxic effects on the structures and function of AFD sensory neurons in Pb-exposed nematodes. 展开更多
关键词 THERMOTAXIS lead exposure oxidative stress AFD sensory neuron Caenorhabditis elegans
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