Electrical impedance tomography (EIT) reconstructs the internal impedance distribution of the body from electrical measurements on body surface. The algorithm research is one of the main problems of the EIT. This pape...Electrical impedance tomography (EIT) reconstructs the internal impedance distribution of the body from electrical measurements on body surface. The algorithm research is one of the main problems of the EIT. This paper presents the MPSO-MNR Algorithm, which is formed by combining the Modified Particle Swarm Optimization (MPSO) with Modified Newton-Raphson algorithm (MNR), gives the reconstruction results of certain configurations and analyzes the influence of the noise on the MPSO-MNR algorithm in the EIT. The numerical results show that the MPSO-MNR algorithm can reconstruct the resistivity distribution within the certain iterations. With the moving of the target to the centre of 2-D solution domain and the increase of noise, the border of the reconstruction objects becomes vague, and the fitness value and the total error increase gradually.展开更多
Modulating Tankyrases(TNKS),interactions with USP25 to promote TNKS degradation,rather than inhibiting their enzymatic activities,is emerging as an alternative/specific approach to inhibit the Wnt/β-catenin pathway.H...Modulating Tankyrases(TNKS),interactions with USP25 to promote TNKS degradation,rather than inhibiting their enzymatic activities,is emerging as an alternative/specific approach to inhibit the Wnt/β-catenin pathway.Here,we identified UAT-B,a novel neoantimycin analog isolated from Streptomyces conglobatus,as a small-molecule inhibitor of TNKS-USP25 protein-protein interaction(PPI)to overcome multi-drug resistance in colorectal cancer(CRC).The disruption of TNKS-USP25 complex formation by UAT-B led to a significant decrease in TNKS levels,triggering cell apoptosis through modulation of the Wnt/β-catenin pathway.Importantly,UAT-B successfully inhibited the CRC cells growth that harbored high TNKS levels,as demonstrated in various in vitro and in vivo studies utilizing cell line-based and patient-derived xenografts,as well as APC^(min/+)spontaneous CRC models.Collectively,these findings suggest that targeting the TNKS-USP25 PPI using a small-molecule inhibitor represents a compelling therapeutic strategy for CRC treatment,and UAT-B emerges as a promising candidate for further preclinical and clinical investigations.展开更多
Epoxy resin(EP)composites with satisfactory thermal and tribological performance are highly required for engineering moving components.However,the simple addition of fillers leaded to the serious filler agglomeration ...Epoxy resin(EP)composites with satisfactory thermal and tribological performance are highly required for engineering moving components.However,the simple addition of fillers leaded to the serious filler agglomeration and limited promotion in tribological properties.In this work,we constructed a new kind of three-dimensional(3D)reduced graphene oxide(RGO)/Si_(3)N_(4) hybrid aerogel for EP composites,which was prepared by a facile hydrothermal self-assembly method followed by freeze-drying technique.As a result,the dispersibility of Si_(3)N_(4) whiskers was greatly improved through wrapping of polydopamine–polyethyleneimine copolymer(PDA–PEI)copolymer and physical spacing of 3D skeleton.Furthermore,benefiting from the synergistic effect of RGO and Si_(3)N_(4)@PDA–PEI in the thermal network,the thermal conductivity of RGO/Si_(3)N_(4) hybrid aerogel(GSiA)–EP increased by 45.4%compared to that of the neat EP.In addition,the friction coefficient and wear rate of GSiA–EP decreased by 83.7%and 35.8%,respectively.This work is significant for opening a tribological performance enhancement strategy though constructing 3D hybrid architecture.展开更多
This paper proposes an event-based two-stage Nonintrusive load monitoring(NILM)method involving multidimensional features,which is an essential technology for energy savings and management.First,capture appliance even...This paper proposes an event-based two-stage Nonintrusive load monitoring(NILM)method involving multidimensional features,which is an essential technology for energy savings and management.First,capture appliance events using a goodness of fit test and then pair the on-off events.Then the multi-dimensional features are extracted to establish a feature library.In the first stage identification,several groups of events for the appliance have been divided,according to three features,including phase,steady active power and power peak.In the second stage identification,a“one against the rest”support vector machine(SVM)model for each group is established to precisely identify the appliances.The proposed method is verified by using a public available dataset;the results show that the proposed method contains high generalization ability,less computation,and less training samples.展开更多
The bacterial trialkyl-substituted aromatic polyketides are structurally featured with the unusual aromatic core in the middle of polyketide chain such as TM-123(1),veramycin A(2),NFAT-133(3)and benwamycin I(4),which ...The bacterial trialkyl-substituted aromatic polyketides are structurally featured with the unusual aromatic core in the middle of polyketide chain such as TM-123(1),veramycin A(2),NFAT-133(3)and benwamycin I(4),which were discovered from Streptomyces species and demonstrated with antidiabetic and immunosuppressant activities.Though the biosynthetic pathway of 1-3 was reported as a type I polyketide synthase(PKS),the PKS assembly line was interpreted inconsistently,and it remains a mystery how the compound 3 was generated.Herein,the PKS assembly logic of 1-4 was revised by site-mutagenetic analysis of the PKS dehydratase domains.Based on gene deletion and complementation,the putative P450 monooxygenase nftE1 and metallo-beta-lactamase(MBL)fold hydrolase nftF1 were verified as essential genes for the biosynthesis of 1-4.The absence of nftE1 led to abolishment of 1-4 and accumulation of new products(5-8).Structural elucidation reveals 5-8 as the non-aromatic analogs of 1,suggesting the NftE1-catalyzed aromatic core formation.Deletion of nftF1 resulted in disappearance of 3 and 4 with the compounds 1 and 2 unaffected.As a rare MBL-fold hydrolase from type I PKSs,NftF1 potentially generates the compound 3 through two strategies:catalyze premature chain-offloading as a trans-acting thioesterase or hydrolyze the lactone-bond of compound 1 as an esterase.展开更多
Four new chlorinated carbazole alkaloids,chlocarbazomycins(CCBs)A-D,were isolated from sponge associated bacterium Streptomyces diacarni LHW51701.Their structures were elucidated via spectroscopic techniques(including...Four new chlorinated carbazole alkaloids,chlocarbazomycins(CCBs)A-D,were isolated from sponge associated bacterium Streptomyces diacarni LHW51701.Their structures were elucidated via spectroscopic techniques(including HRESIMS,ID&2D NMR),and X-ray crystallographic analysis.Structurally,the 4-chloro coupled with 3-methoxyl substituents in the tricycle nucleus of CCBs A-D and the A/-methoxyl group of CCB-D are rare in naturally occurred tricyclic carbazole alkaloids.Moreover,CCBs A-D do not bear the typical Cl poro-alkyl and C2 meto-methyl side chains of bacterial tricycle carbazoles,suggesting a novel mechanism of aromatic ring formation in biosynthesis.The biological evaluation showed that CCB-C possessed inhibitory activities against pathogenic microorganisms including methicillin-resistant Staphylococcus aureus(MRSA),Mycobacterium smegmatis,Bacillus mycoides,and Candida albicans.展开更多
Piericidins are a large family of bacterialα-pyridone antibiotics with antitumor activities such as their anti-renal carcinoma activity exhibited recently in nude mice.The backbones of piericidins are derived fromβ,...Piericidins are a large family of bacterialα-pyridone antibiotics with antitumor activities such as their anti-renal carcinoma activity exhibited recently in nude mice.The backbones of piericidins are derived fromβ,δ-diketo carboxylic acids,which are offloaded from a modular polyketide synthase(PKS)and putatively undergo a carbonyl amidation beforeα-pyridone ring formation.The tailoring modifications to theα-pyridone structure mainly include the verified hydroxylation and O-methylation of the C-4′position and an unidentified C-5′O-methylation.Here,we describe a piericidin producer,terrestrial Streptomyces conglobatus,which contains a piericidin biosynthetic gene cluster in two different loci.Deletion of the amidotransferase gene pieD resulted in the accumulation of two fatty acids that should be degraded from the nascent carboxylic acid released by the PKS,supporting the carbonyl amidation function of PieD duringα-pyridone ring formation.Deletion of the O-methyltransferase gene pieB1 led to the production of three piericidin analogues lacking C-5′O-methylation,therefore confirming that PieB1 specifically catalyses the tailoring modification.Moreover,bioactivity analysis of the mutant-derived products provided clues regarding the structure-function relationship for antitumor activity.The work addresses two previously unidentified steps involved in pyridyl pharmacophore formation during piericidin biosynthesis,facilitating the rational bioengineering of the biosynthetic pathway towards valuable antitumor agents.展开更多
Non-ribosomal peptides are a group of structurally diverse natural products with various important therapeutic and agrochemical applications.Bacterial pyrrolizidine alkaloids(PAs),containing a scaffold of two fused fi...Non-ribosomal peptides are a group of structurally diverse natural products with various important therapeutic and agrochemical applications.Bacterial pyrrolizidine alkaloids(PAs),containing a scaffold of two fused five-membered ring system with a nitrogen atom at the bridgehead,have been found to originate from a multidomain non-ribosomal peptide synthetase to generate indolizidine intermediates,followed by multistep oxidation,catalysed by single Bayer-Villiger(BV)enzymes,to yield PA scaffolds.Although bacterial PAs are rare in natural product inventory,bioinformatics analysis suggested that the biosynthetic gene clusters(BGCs)that are likely to be responsible for the production of PA-like metabolites are widely distributed in bacterial genomes.However,most of the strains containing PA-like BGCs are not deposited in the public domain,therefore preventing further assessment of the chemical spaces of this group of bioactive metabolites.Here,we report a genomic scanning strategy to assess the potential of PA metabolites production in our culture collection without prior knowledge of genome information.Among the strains tested,we found fifteen contain the key BV enzymes that are likely to be involved in the last step of PA ring formation.Subsequently one-strain-many-compound(OSMAC)method,supported by a combination of HR-MS,NMR,SMART 2.0 technology,and GNPS analysis,allowed identification and characterization of a new[5+7]heterobicyclic carbamate,legoncarbamate,together with five known PAs,bohemamine derivatives,from Streptomyces sp.CT37,a Ghanaian soil isolate.The absolute stereochemistry of legoncarbamate was determined by comparison of measured and calculated ECD spectra.Legoncarbamate displays antibacterial activity against E.coli ATCC 25922 with an MIC value of 3.1μg/mL.Finally,a biosynthetic model of legoncarbamate and other bohemamines was proposed based on the knowledge we have gained so far.展开更多
文摘Electrical impedance tomography (EIT) reconstructs the internal impedance distribution of the body from electrical measurements on body surface. The algorithm research is one of the main problems of the EIT. This paper presents the MPSO-MNR Algorithm, which is formed by combining the Modified Particle Swarm Optimization (MPSO) with Modified Newton-Raphson algorithm (MNR), gives the reconstruction results of certain configurations and analyzes the influence of the noise on the MPSO-MNR algorithm in the EIT. The numerical results show that the MPSO-MNR algorithm can reconstruct the resistivity distribution within the certain iterations. With the moving of the target to the centre of 2-D solution domain and the increase of noise, the border of the reconstruction objects becomes vague, and the fitness value and the total error increase gradually.
基金This study was financially supported by the National Key Research and Development Program of China(2022YFC2804100,2021YFF0502400,2022YFC2804300)National Natural Science Foundation of China(82073713,22137006,82104033,82173730,81903499,32070070,82160669)Innovative research team of highlevel local universities in Shanghai(SHSMU-ZDCX20212702,China).We thank Dr.Juncheng Su from Shanghai Jiao-Tong University School of Medicine(Shanghai,China)for providing the LoVo and COLO 320DM cell lines.
文摘Modulating Tankyrases(TNKS),interactions with USP25 to promote TNKS degradation,rather than inhibiting their enzymatic activities,is emerging as an alternative/specific approach to inhibit the Wnt/β-catenin pathway.Here,we identified UAT-B,a novel neoantimycin analog isolated from Streptomyces conglobatus,as a small-molecule inhibitor of TNKS-USP25 protein-protein interaction(PPI)to overcome multi-drug resistance in colorectal cancer(CRC).The disruption of TNKS-USP25 complex formation by UAT-B led to a significant decrease in TNKS levels,triggering cell apoptosis through modulation of the Wnt/β-catenin pathway.Importantly,UAT-B successfully inhibited the CRC cells growth that harbored high TNKS levels,as demonstrated in various in vitro and in vivo studies utilizing cell line-based and patient-derived xenografts,as well as APC^(min/+)spontaneous CRC models.Collectively,these findings suggest that targeting the TNKS-USP25 PPI using a small-molecule inhibitor represents a compelling therapeutic strategy for CRC treatment,and UAT-B emerges as a promising candidate for further preclinical and clinical investigations.
基金The authors gratefully acknowledge the financial support from the National Natural Science Foundation of China(Grant No.52005487)Natural Science Foundation of Gansu Province(Grant No.20JR10RA057).
文摘Epoxy resin(EP)composites with satisfactory thermal and tribological performance are highly required for engineering moving components.However,the simple addition of fillers leaded to the serious filler agglomeration and limited promotion in tribological properties.In this work,we constructed a new kind of three-dimensional(3D)reduced graphene oxide(RGO)/Si_(3)N_(4) hybrid aerogel for EP composites,which was prepared by a facile hydrothermal self-assembly method followed by freeze-drying technique.As a result,the dispersibility of Si_(3)N_(4) whiskers was greatly improved through wrapping of polydopamine–polyethyleneimine copolymer(PDA–PEI)copolymer and physical spacing of 3D skeleton.Furthermore,benefiting from the synergistic effect of RGO and Si_(3)N_(4)@PDA–PEI in the thermal network,the thermal conductivity of RGO/Si_(3)N_(4) hybrid aerogel(GSiA)–EP increased by 45.4%compared to that of the neat EP.In addition,the friction coefficient and wear rate of GSiA–EP decreased by 83.7%and 35.8%,respectively.This work is significant for opening a tribological performance enhancement strategy though constructing 3D hybrid architecture.
基金supported by the National Science Foundation of China(U2166209,52007126)the Science and Technology Project of State Grid Tibet Electric Power Company(52311020009X)。
文摘This paper proposes an event-based two-stage Nonintrusive load monitoring(NILM)method involving multidimensional features,which is an essential technology for energy savings and management.First,capture appliance events using a goodness of fit test and then pair the on-off events.Then the multi-dimensional features are extracted to establish a feature library.In the first stage identification,several groups of events for the appliance have been divided,according to three features,including phase,steady active power and power peak.In the second stage identification,a“one against the rest”support vector machine(SVM)model for each group is established to precisely identify the appliances.The proposed method is verified by using a public available dataset;the results show that the proposed method contains high generalization ability,less computation,and less training samples.
基金the National Natural Science Foundation of China(Nos.32070070,32211530074 and 31929001)the innovative research team of high-level local universities in Shanghai.H.D.thanks Royal Society-NSFC international exchange grant(IEC\NSFC\211349).
文摘The bacterial trialkyl-substituted aromatic polyketides are structurally featured with the unusual aromatic core in the middle of polyketide chain such as TM-123(1),veramycin A(2),NFAT-133(3)and benwamycin I(4),which were discovered from Streptomyces species and demonstrated with antidiabetic and immunosuppressant activities.Though the biosynthetic pathway of 1-3 was reported as a type I polyketide synthase(PKS),the PKS assembly line was interpreted inconsistently,and it remains a mystery how the compound 3 was generated.Herein,the PKS assembly logic of 1-4 was revised by site-mutagenetic analysis of the PKS dehydratase domains.Based on gene deletion and complementation,the putative P450 monooxygenase nftE1 and metallo-beta-lactamase(MBL)fold hydrolase nftF1 were verified as essential genes for the biosynthesis of 1-4.The absence of nftE1 led to abolishment of 1-4 and accumulation of new products(5-8).Structural elucidation reveals 5-8 as the non-aromatic analogs of 1,suggesting the NftE1-catalyzed aromatic core formation.Deletion of nftF1 resulted in disappearance of 3 and 4 with the compounds 1 and 2 unaffected.As a rare MBL-fold hydrolase from type I PKSs,NftF1 potentially generates the compound 3 through two strategies:catalyze premature chain-offloading as a trans-acting thioesterase or hydrolyze the lactone-bond of compound 1 as an esterase.
基金the National Key R&D Program of China(No.2019YFC0312501)the National Natural Science Foundation of China(No.31929001)+2 种基金the Special Project for Marine Economic Development(Six Major Marine Industries)of Guangdong Province Department of Natural Resources of Guangdong Province(No.[2020]039)the Construction Project of Shanghai Key Laboratory of Molecular Imaging(No.18DZ2260400)the Innovative Research Team of High-Level Local Universities in Shanghai,and the Taishan Scholar Project from Shandong Province to H.L.The authors are grateful to Ying Wu for QTOF mass analysis,Hong-Yan Liu for NMR analysis,and Prof.Meifeng Tao from School of Life Sciences and Biotechnology,Shanghai Jiao Tong University for kindly providing the indicator strains for bioactivity assay.
文摘Four new chlorinated carbazole alkaloids,chlocarbazomycins(CCBs)A-D,were isolated from sponge associated bacterium Streptomyces diacarni LHW51701.Their structures were elucidated via spectroscopic techniques(including HRESIMS,ID&2D NMR),and X-ray crystallographic analysis.Structurally,the 4-chloro coupled with 3-methoxyl substituents in the tricycle nucleus of CCBs A-D and the A/-methoxyl group of CCB-D are rare in naturally occurred tricyclic carbazole alkaloids.Moreover,CCBs A-D do not bear the typical Cl poro-alkyl and C2 meto-methyl side chains of bacterial tricycle carbazoles,suggesting a novel mechanism of aromatic ring formation in biosynthesis.The biological evaluation showed that CCB-C possessed inhibitory activities against pathogenic microorganisms including methicillin-resistant Staphylococcus aureus(MRSA),Mycobacterium smegmatis,Bacillus mycoides,and Candida albicans.
基金support from the National Natural Science Foundation of China(Nos.32070070,31929001,and 31800031)the Innovative Research Team of High-Level Local Universities in Shanghai。
文摘Piericidins are a large family of bacterialα-pyridone antibiotics with antitumor activities such as their anti-renal carcinoma activity exhibited recently in nude mice.The backbones of piericidins are derived fromβ,δ-diketo carboxylic acids,which are offloaded from a modular polyketide synthase(PKS)and putatively undergo a carbonyl amidation beforeα-pyridone ring formation.The tailoring modifications to theα-pyridone structure mainly include the verified hydroxylation and O-methylation of the C-4′position and an unidentified C-5′O-methylation.Here,we describe a piericidin producer,terrestrial Streptomyces conglobatus,which contains a piericidin biosynthetic gene cluster in two different loci.Deletion of the amidotransferase gene pieD resulted in the accumulation of two fatty acids that should be degraded from the nascent carboxylic acid released by the PKS,supporting the carbonyl amidation function of PieD duringα-pyridone ring formation.Deletion of the O-methyltransferase gene pieB1 led to the production of three piericidin analogues lacking C-5′O-methylation,therefore confirming that PieB1 specifically catalyses the tailoring modification.Moreover,bioactivity analysis of the mutant-derived products provided clues regarding the structure-function relationship for antitumor activity.The work addresses two previously unidentified steps involved in pyridyl pharmacophore formation during piericidin biosynthesis,facilitating the rational bioengineering of the biosynthetic pathway towards valuable antitumor agents.
基金QF and HD are grateful to the University of Aberdeen Elphinstone Scholarship and Scottish Funding Council/ScotCHEM for financial support through the PEER/PERCE Funding.HD and SW thank the financial supports of Biotechnology and Biological Sciences Research Council UK(BBSRC,BB/P00380X/1)HD,SAM and CP thank Business Interaction Vouchers(BIV009)from BBSRC funded Natural Products discovery and bioengineering Network(NPRONET)+2 种基金H.D.and K.K.thank the financial supports of Leverhulme Trust-Royal Society Africa award(AA090088)the jointly funded UK Medical Research Council-UK Department for International Development(MRC/DFID)Concordat agreement African Research Leaders Award(MR/S00520X/1)YZ and HD thank National Natural Science Foundation of China(31929001).
文摘Non-ribosomal peptides are a group of structurally diverse natural products with various important therapeutic and agrochemical applications.Bacterial pyrrolizidine alkaloids(PAs),containing a scaffold of two fused five-membered ring system with a nitrogen atom at the bridgehead,have been found to originate from a multidomain non-ribosomal peptide synthetase to generate indolizidine intermediates,followed by multistep oxidation,catalysed by single Bayer-Villiger(BV)enzymes,to yield PA scaffolds.Although bacterial PAs are rare in natural product inventory,bioinformatics analysis suggested that the biosynthetic gene clusters(BGCs)that are likely to be responsible for the production of PA-like metabolites are widely distributed in bacterial genomes.However,most of the strains containing PA-like BGCs are not deposited in the public domain,therefore preventing further assessment of the chemical spaces of this group of bioactive metabolites.Here,we report a genomic scanning strategy to assess the potential of PA metabolites production in our culture collection without prior knowledge of genome information.Among the strains tested,we found fifteen contain the key BV enzymes that are likely to be involved in the last step of PA ring formation.Subsequently one-strain-many-compound(OSMAC)method,supported by a combination of HR-MS,NMR,SMART 2.0 technology,and GNPS analysis,allowed identification and characterization of a new[5+7]heterobicyclic carbamate,legoncarbamate,together with five known PAs,bohemamine derivatives,from Streptomyces sp.CT37,a Ghanaian soil isolate.The absolute stereochemistry of legoncarbamate was determined by comparison of measured and calculated ECD spectra.Legoncarbamate displays antibacterial activity against E.coli ATCC 25922 with an MIC value of 3.1μg/mL.Finally,a biosynthetic model of legoncarbamate and other bohemamines was proposed based on the knowledge we have gained so far.