Objective:Histology grade,subtypes and TNM stage of lung adenocarcinomas are useful predictors of prognosis and survival.The aim of the study was to investigate the relationship between chromosomal instability,morphol...Objective:Histology grade,subtypes and TNM stage of lung adenocarcinomas are useful predictors of prognosis and survival.The aim of the study was to investigate the relationship between chromosomal instability,morphological subtypes and the grading system used in lung non-mucinous adenocarcinoma(LNMA).Methods:We developed a whole genome copy number variation(WGCNV)scoring system and applied next generation sequencing to evaluate CNVs present in 91 LNMA tumor samples.Results:Higher histological grades,aggressive subtypes and more advanced TNM staging were associated with an increased WGCNV score,particularly in CNV regions enriched for tumor suppressor genes and oncogenes.In addition,we demonstrate that 24-chromosome CNV profiling can be performed reliably from specific cell types(<100 cells)isolated by sample laser capture microdissection.Conclusions:Our findings suggest that the WGCNV scoring system we developed may have potential value as an adjunct test for predicting the prognosis of patients diagnosed with LNMA.展开更多
Qilianyu Islands coral reefs(QICR),located in the northeastern part of the South China Sea,has been affected by human activities and natural disturbance.To characterize the trophic structure,ecosystem properties and k...Qilianyu Islands coral reefs(QICR),located in the northeastern part of the South China Sea,has been affected by human activities and natural disturbance.To characterize the trophic structure,ecosystem properties and keystone species of this region,a food-web model for the QICR is developed using methods involving a mass-balance approach with Ecopath with Ecosim software.Trophic levels range from 1.00 for detritus and primary producers to 3.80 for chondrichthyes.The mean trophic transfer efficiency for the entire ecosystem is 13.15%,with 55%of total energy flow originating from primary producers.A mixed trophic impact analysis indicates that coral strongly impacts most components of this ecosystem.A comparison of our QICR model with that for other coral reef ecosystems suggests that the QICR ecosystem is immature and/or is degraded.展开更多
基金grants from Beijing Hospital Key Research Program(121 Research Program,No.BJ2019-195)。
文摘Objective:Histology grade,subtypes and TNM stage of lung adenocarcinomas are useful predictors of prognosis and survival.The aim of the study was to investigate the relationship between chromosomal instability,morphological subtypes and the grading system used in lung non-mucinous adenocarcinoma(LNMA).Methods:We developed a whole genome copy number variation(WGCNV)scoring system and applied next generation sequencing to evaluate CNVs present in 91 LNMA tumor samples.Results:Higher histological grades,aggressive subtypes and more advanced TNM staging were associated with an increased WGCNV score,particularly in CNV regions enriched for tumor suppressor genes and oncogenes.In addition,we demonstrate that 24-chromosome CNV profiling can be performed reliably from specific cell types(<100 cells)isolated by sample laser capture microdissection.Conclusions:Our findings suggest that the WGCNV scoring system we developed may have potential value as an adjunct test for predicting the prognosis of patients diagnosed with LNMA.
基金The National Key Research and Development Program of China under contract No.2018YFC1406502the National Natural Science Foundation of China under contract No.31902374+1 种基金the Key Special Project for Introduced Talents Team of Southern Marine Science and Engineering Guangdong Laboratory(Guangzhou)under contract No.GML2019ZD0605the Central Public-Interest Scientific Institution Basal Research Fund of Chinese Academy of Fishery Sciences under contract No.2020TD05.
文摘Qilianyu Islands coral reefs(QICR),located in the northeastern part of the South China Sea,has been affected by human activities and natural disturbance.To characterize the trophic structure,ecosystem properties and keystone species of this region,a food-web model for the QICR is developed using methods involving a mass-balance approach with Ecopath with Ecosim software.Trophic levels range from 1.00 for detritus and primary producers to 3.80 for chondrichthyes.The mean trophic transfer efficiency for the entire ecosystem is 13.15%,with 55%of total energy flow originating from primary producers.A mixed trophic impact analysis indicates that coral strongly impacts most components of this ecosystem.A comparison of our QICR model with that for other coral reef ecosystems suggests that the QICR ecosystem is immature and/or is degraded.
