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优化大肠杆菌CRISPR/Cas9基因编辑系统及应用 被引量:2
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作者 邵梦瑶 路福平 +1 位作者 朱欣娜 张学礼 《生物学杂志》 CAS CSCD 北大核心 2020年第4期106-110,114,共6页
CRISPR/Cas9基因编辑系统目前已经广泛地应用于大肠杆菌工程菌株的构建,若能构建出一种能连续进行基因编辑的CRISPR/Cas9系统,将极大地提高大肠杆菌工程菌株构建的效率。设计并构建了具有自剪切功能的供体质粒pV4,优化了双质粒CRISPR/C... CRISPR/Cas9基因编辑系统目前已经广泛地应用于大肠杆菌工程菌株的构建,若能构建出一种能连续进行基因编辑的CRISPR/Cas9系统,将极大地提高大肠杆菌工程菌株构建的效率。设计并构建了具有自剪切功能的供体质粒pV4,优化了双质粒CRISPR/Cas9基因编辑系统,实现了基因的连续敲除或整合。pV4质粒,在原始供体质粒placZ的骨架区域添加3个元件:针对供体质粒上氯霉素基因cat的N20-gRNA序列;Ptrc启动子,用于表达cat-N20-gRNA;lacI^q序列,用于表达LacI蛋白调控Ptrc启动子。pV4供体系列质粒(敲除或整合)实现基因编辑后,cat-N20-gRNA在IPTG的诱导表达引导Cas9蛋白对供体质粒进行自剪切,从而方便下一轮基因的编辑。将pV4系列质粒(敲除或整合)应用于产衣康酸工程菌株的构建,连续敲除ptsI、iclR及整合cad基因,基因编辑结果显示,优化后的双质粒CRISPR/Cas9基因编辑系统,能快速消除供体质粒,实现基因的连续敲除或整合,节约了基因操作的时间,有广泛的工程菌株构建应用前景。 展开更多
关键词 CRISPR/Cas9 基因编辑 大肠杆菌 自剪切功能
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大肠杆菌染色体上严谨型启动子的构建 被引量:1
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作者 仇焕娜 赵东东 +3 位作者 满淑丽 毕昌昊 朱欣娜 张学礼 《微生物学通报》 CAS CSCD 北大核心 2018年第8期1693-1704,共12页
【背景】启动子的渗漏表达是代谢工程和合成生物学较为关注的问题,探索严谨型启动子使之能像开关一样控制基因的表达有助于解决这一问题。【目的】为避免在质粒上研究启动子带来的弊端,本研究将在染色体上对严谨型启动子进行构建和评价... 【背景】启动子的渗漏表达是代谢工程和合成生物学较为关注的问题,探索严谨型启动子使之能像开关一样控制基因的表达有助于解决这一问题。【目的】为避免在质粒上研究启动子带来的弊端,本研究将在染色体上对严谨型启动子进行构建和评价。【方法】基于4种调控元件四环素tetO、乳糖lacO、阿拉伯糖araC和鼠李糖rhaR的序列,以及2种来源的启动子PL和Plac序列,设计和组合构建了6个启动子PtetO2、PtetO3、PlacO2、PlacO3、PlacO+ara和PlacO+rha。应用CRISPR/Cas9系统将这6个启动子序列整合到大肠杆菌ATCC 8739染色体上,利用绿色荧光蛋白(Green fluorescent protein,GFP)的表达,分析这6个启动子的相对表达强度和严谨型控制情况。【结果】GFP表达分析显示,启动子PlacO+rha为最佳严谨型启动子,在无诱导剂时表达为0.02,有诱导剂时最大表达强度为lac Z基因启动子的12倍,相对控制范围为600倍。【结论】研究结果将为代谢工程和合成生物学中的精确调控基因表达奠定良好的应用基础。 展开更多
关键词 严谨型 启动子 绿色荧光蛋白 大肠杆菌
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Engineering CrtW and CrtZ for improving biosynthesis of astaxanthin in Escherichia coli 被引量:4
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作者 LI Di LI Yang +7 位作者 XU Jiao-Yang LI Qing-Yan TANG Jin-Lei JIA Shi-Ru BI Chang-Hao DAI zhu-Bo zhu xin-na ZHANG Xue-Li 《Chinese Journal of Natural Medicines》 SCIE CAS CSCD 2020年第9期666-676,共11页
This study engineered β-carotene ketolase CrtW and β-carotene hydroxylase CrtZ to improve biosynthesis of astaxanthin in Escherichia coli. Firstly, crtW was randomly mutated to increase CrtW activities on conversion... This study engineered β-carotene ketolase CrtW and β-carotene hydroxylase CrtZ to improve biosynthesis of astaxanthin in Escherichia coli. Firstly, crtW was randomly mutated to increase CrtW activities on conversion from β-carotene to astaxanthin. A crtW* mutant with A6 T, T105 A and L239 M mutations has improved 5.35-fold astaxanthin production compared with the wild-type control. Secondly, the expression levels of crtW* and crtZ on chromosomal were balanced by simultaneous modulation RBS regions of their genes using RBS library. The strain RBS54 selected from RBS library, directed the pathway exclusively towards the desired product astaxanthin as predominant carotenoid(99%). Lastly, the number of chromosomal copies of the balanced crtW*-crtZ cassette from RBS54 was increased using a Cre-loxP based technique, and a strain with 30 copies of the crtW*-crtZ cassette was selected. This final strain DL-A008 had a 9.8-fold increase of astaxanthin production compared with the wild-type control. Fed-batch fermentation showed that DL-A008 produced astaxanthin as predominant carotenoid(99%) with a specific titer of 0.88 g·L^(-1) without addition of inducer. In conclusion, through constructing crtW mutation, balancing the expression levels between crtW* and crtZ, and increasing the copy number of the balanced crtW*-crtZ cassette, the activities of β-carotene ketolase and β-carotene hydroxylase were improved for conversion of β-carotene to astaxanthin with higher efficiency. The series of conventional and novel metabolic engineering strategies were designed and applied to construct the astaxanthin hetero-producer strain of E. coli, possibly offering a general approach for the construction of stable hetero-producer strains for other natural products. 展开更多
关键词 ASTAXANTHIN RBS library Metabolic engineering β-Carotene ketolase CRE-LOXP Escherichia coli
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