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Advances in single-cell sequencing technology and its application in eye diseases
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作者 zheyao chen Youjin Hu 《Eye Science》 2024年第2期128-144,共17页
Vision serves as the cornerstone of rountine human life activities,wherein approximately 80%of information is perceived visually.Eye diseases,however,frequently culminate in vision impairment or blindness,severely aff... Vision serves as the cornerstone of rountine human life activities,wherein approximately 80%of information is perceived visually.Eye diseases,however,frequently culminate in vision impairment or blindness,severely affecting the quality of life.Due to the obscurity of the underlying molecular mechanisms,therapeutic outcomes for various blinding eye diseases remain suboptimal.Over the past decade,the development of single-cell genomics technology has made it possible to obtain multi-dimensional insights into genomes,epigenomes,transcriptomes,and proteomes of tissues and organs at the single-cell level,providing a potent tool for elucidating the molecular mechanisms of eye diseases and advancing precision diagnosis.Meanwhile,single-cell genomics technology has also been harnessed in drug discovery and screening,promising to transform traditional drug development paradigm that is often characterized by high cost[1],time-consuming[2],and substantial failure rate.This review aims to describe the cutting-edge advances in single-cell omics technology and its applications in precision diagnosis of eye diseases as well as drug discovery and screening. 展开更多
关键词 SINGLE-CELL multi-omics eye diseases drug discovery
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基于TCGA数据库分析B3GAT3基因在肝癌中的表达及临床意义 被引量:1
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作者 陈哲垚 侯德富 +3 位作者 彭莉蓉 刘琼 于爱清 王启广 《湖南师范大学学报(医学版)》 2022年第6期70-75,共6页
目的:基于TCGA数据库等公共数据库中的癌症数据,分析B3GAT3基因在原发性肝癌中的表达及其临床意义.方法:基于TCGA数据库等公共数据库中的原发性肝癌患者的基因表达相关数据和相应的临床资料,采用GEPIA、UALCAN数据库工具分析B3GAT3 mRN... 目的:基于TCGA数据库等公共数据库中的癌症数据,分析B3GAT3基因在原发性肝癌中的表达及其临床意义.方法:基于TCGA数据库等公共数据库中的原发性肝癌患者的基因表达相关数据和相应的临床资料,采用GEPIA、UALCAN数据库工具分析B3GAT3 mRNA、蛋白在肝癌与正常组织之间的表达情况,比较B3GAT3基因在肝癌各临床病理分期之间的表达差异,然后进行Kaplan-Meier生存分析评估其对肝癌患者生存期的影响,最后用SPSS24.0软件做ROC曲线分析该基因作为肝癌的一个诊断指标的可行性.结果:B3GAT3 mRNA、蛋白在肝癌组织中表达比正常组织高;B3GAT3表达与肝癌的临床分期没有显著的相关性(P>0.05);B3GAT3高表达组的肝癌患者的总体生存率(OS)(P=2.4e-7<0.05)和无病生存率(DFS)(P=0.0066<0.05)低于B3GAT3低表达组的患者;B3GAT3 mRNA的表达水平是影响原发性肝癌患者OS(HR=2.5,P=6e-7<0.05)和DFS(HR=1.5,P=0.0067)的一个危险因素.B3GAT3基因作为诊断原发性肝癌的诊断指标具有一定的价值(AUC=0.740).结论:B3GAT3基因在原发性肝癌中的表达升高,但该基因在肝癌不同临床病理分期中的表达没有显著差异.B3GAT3基因高表达与肝癌患者的预后不良相关,B3GAT3基因对于肝癌患者预后是一个危险因素.该基因对肝癌的诊断有一定的意义. 展开更多
关键词 原发性肝癌 TCGA数据库 B3GAT3基因
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