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低碳生物合成:机遇与挑战
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作者 王钦宏 张以恒 +2 位作者 田朝光 孙周通 马延和 《科学通报》 EI CAS CSCD 北大核心 2023年第19期2427-2434,共8页
低碳生物合成以CO_(2)等可再生碳资源为原料,以生物体为工具进行物质合成,是节约化石原料的可持续路线,是现有化工、农业产品的替代性低碳生产新模式,是CO_(2)高效利用转化的工业碳汇新路径.目前低碳生物合成的产业影响力、技术经济性... 低碳生物合成以CO_(2)等可再生碳资源为原料,以生物体为工具进行物质合成,是节约化石原料的可持续路线,是现有化工、农业产品的替代性低碳生产新模式,是CO_(2)高效利用转化的工业碳汇新路径.目前低碳生物合成的产业影响力、技术经济性等还无法与传统路线竞争,CO_(2)等可再生碳资源的生物工业利用范围、转化效率、生物合成的工业能力等是亟待解决的关键科技问题.快速发展的工程生物学是对生物体结构和功能进行工程化设计再造的新生物学领域,正在推动生物学工程化新范式,将从根本上提升生物体将CO_(2)等可再生碳资源转化为生物基产品的能力,引发生物工业的颠覆式突破.针对碳达峰、碳中和战略目标实施,本文分析了低碳生物合成的发展机遇,综述了低碳生物合成国内外的科技进展与发展趋势,探讨了低碳生物合成的科技挑战与重点方向,最后对发展方向提出了相关建议. 展开更多
关键词 低碳生物合成 二氧化碳 可再生碳资源 工程生物学 碳达峰 碳中和
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Modification of the substrate specificity of leucine dehydrogenase by site‑directed mutagenesis based on biocomputing strategies
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作者 Jiapeng Lu Zengyu Wang +2 位作者 Yingying Jiang zhoutong sun Wei Luo 《Systems Microbiology and Biomanufacturing》 2023年第2期384-392,共9页
Synthesis of chiral amines by amine dehydrogenase has the advantages of environmental friendliness,high stereoselectivity,and mild reaction conditions.However,amine dehydrogenase has low catalytic activity,which great... Synthesis of chiral amines by amine dehydrogenase has the advantages of environmental friendliness,high stereoselectivity,and mild reaction conditions.However,amine dehydrogenase has low catalytic activity,which greatly limits its application in the large-scale synthesis of chiral amines.In this study,a novel amine dehydrogenase was obtained by modifying the substrate specificity of leucine dehydrogenase via computer-aided protein engineering strategy.Furthermore,conservation analysis,homology modeling and molecular docking analysis were carried out via biocomputing strategy to select the mutation sites,and the mutants L52S and T143C were obtained.The enzyme activities of the two mutants to 2-pentanone were 1.55 U/mg and 2.06 U/mg,respectively.The enzyme activity of the latter was 188%and the Tm value was 2.55°Chigher than those of the original mutant,which laid a foundation for the efficient preparation of chiral amines by using this novel enzyme. 展开更多
关键词 Amine dehydrogenase L-leucine dehydrogenase Semi-rational design Protein engineering Substrate binding pocket
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Book review of“Enzyme engineering:Selective catalysts for applications in biotechnology,organic chemistry,and life science”
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作者 Manfred T.Reetz zhoutong sun Ge Qu 《Green Synthesis and Catalysis》 2023年第2期77-77,共1页
This book[1]begins with an introductory chapter in which the history of directed enzyme evolution is briefly presented and the different gene mutagenesis techniques are outlined,followed by a comprehensive chapter des... This book[1]begins with an introductory chapter in which the history of directed enzyme evolution is briefly presented and the different gene mutagenesis techniques are outlined,followed by a comprehensive chapter describing medium-and high-throughput screening systems for assaying stereoselectivity and activity. 展开更多
关键词 Directed evolution Rational design Enzyme engineering METHODOLOGY BIOCATALYSIS
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理性设计拢牛儿物牛儿基焦磷酸合酶(GGPPS)能够显著增强模式植物烟草类胡萝卜合成及光合作用效率 被引量:3
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作者 董臣 曲戈 +8 位作者 郭敬功 位芳 高书文 孙周通 金立锋 孙旭武 Jean-David Rochaix 苗雨晨 王燃 《Science Bulletin》 SCIE EI CSCD 2022年第3期315-327,共13页
植物品种培育的关键是寻找优良基因.通过理性设计对植物关键酶进行改造,有望为植物品种培有提供新的优良基因.NtGGPPSI是烟草类胡萝卜素合成途径的限速酶,ntggppsl突变体类胡萝卜含量显著降低.对NtGGPPS1进行理性设计,重塑酶与底物的结... 植物品种培育的关键是寻找优良基因.通过理性设计对植物关键酶进行改造,有望为植物品种培有提供新的优良基因.NtGGPPSI是烟草类胡萝卜素合成途径的限速酶,ntggppsl突变体类胡萝卜含量显著降低.对NtGGPPS1进行理性设计,重塑酶与底物的结合口袋,构建单点饱和突变体文库.通过高通量的细菌颜色实验进行筛选,获.得5个可以显著提升酶活性的氨基酸位点,进一步对以上位点进行迭代组合突变获得酶活性最高的5突变体d-NtGGPPS1(V154A/1161L/F218Y/1209S/V233E).相对于NtGGPPSI,理性设计的d-NtGGPPSI可以将底物IPP和共同底物DMAPP转化为GGPP的效率提高约1995.5倍,能够将GPP或FPP转化产生GGPP的效率提高约25.9或16.7倍.将d-NtGGPPSI回补到ntggppsI突变体可以显著提升叶片类胡萝卜含量,生物量及光合作用效率.该研究表明理性设计GGPPS可以提升植物的产量和品质性状,并为未来通过理性设计获得植物优良基因提供新的突破口. 展开更多
关键词 光合作用效率 理性设计 优良基因 焦磷酸 氨基酸位点 植物品种 品种培育
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Carboxylic acid reductases enable intramolecular lactamization reactions 被引量:1
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作者 Zongmin Qin Xiaohui Zhang +3 位作者 Xianke Sang Wuyuan Zhang Ge Qu zhoutong sun 《Green Synthesis and Catalysis》 2022年第3期294-297,共4页
As a versatile type of enzyme,carboxylic acid reductases(CAR)can not only reduce various carboxylic acids to aldehydes in cooperation with cofactors ATP and NADPH but also catalyze the synthesis of amides and esters i... As a versatile type of enzyme,carboxylic acid reductases(CAR)can not only reduce various carboxylic acids to aldehydes in cooperation with cofactors ATP and NADPH but also catalyze the synthesis of amides and esters in the absence of NADPH.Here,we report an intramolecular cyclization catalyzed by CAR only with the use of ATP to transform amino acids into diverse lactams,includingγ-/δ-/ε-lactams and chiral derivatives thereof.The observed wide substrate scope and selectivity enable potential applications to be implemented.Our results demonstrate that CAR-catalyzed lactamization is a promising approach for the synthesis of chiral lactam com-pounds under mild conditions,thereby enriching the toolbox for the biosynthesis of lactams as a viable alternative to purely chemical procedures. 展开更多
关键词 BIOCATALYSIS LACTAMS Carboxylic acid reductase Intramolecular cyclization Lactamization
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A combined strategy for the overproduction of complex ergot alkaloid agroclavine
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作者 Zhi-Pu Yu Chunyan An +5 位作者 Yongpeng Yao Chang-Yun Wang zhoutong sun Chengsen Cui Ling Liu Shu-Shan Gao 《Synthetic and Systems Biotechnology》 SCIE 2022年第4期1126-1132,共7页
Microbial cell factories(MCFs)and cell-free systems(CFSs)are generally considered as two unrelated approaches for the biosynthesis of biomolecules.In the current study,two systems were combined together for the overpr... Microbial cell factories(MCFs)and cell-free systems(CFSs)are generally considered as two unrelated approaches for the biosynthesis of biomolecules.In the current study,two systems were combined together for the overproduction of agroclavine(AC),a structurally complex ergot alkaloid.The whole biosynthetic pathway for AC was split into the early pathway and the late pathway at the point of the FAD-linked oxidoreductase EasE,which was reconstituted in an MCF(Aspergillus nidulans)and a four-enzyme CFS,respectively.The final titer of AC of this combined system is 1209 mg/L,which is the highest one that has been reported so far,to the best of our knowledge.The development of such a combined route could potentially avoid the limitations of both MCF and CFS systems,and boost the production of complex ergot alkaloids with polycyclic ring systems. 展开更多
关键词 Microbial cell factories Cell-free systems OVERPRODUCTION Agroclavine Ergot alkaloids
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