Dimethylations of histone H3 lysine 9 and lysine 27 are important epigenetic marks associated with transcription repression. Here, we identified KIAA1718 （KDM7A） as a novel histone demethylase specific for these two...Dimethylations of histone H3 lysine 9 and lysine 27 are important epigenetic marks associated with transcription repression. Here, we identified KIAA1718 （KDM7A） as a novel histone demethylase specific for these two repressing marks. Using mouse embryonic stem cells, we demonstrated that KIAA1718 expression increased at the early phase of neural differentiation. Knockdown of the gene blocked neural differentiation and the effect was rescued by the wild-type human gene, and not by a catalytically inactive mutant. In addition, overexpression of KIAA1718 accelerated neural differentiation. We provide the evidence that the pro-neural differentiation effect of KDM7A is mediated through direct transcriptional activation of FGF4, a signal molecule implicated in neural differentiation. Thus, our study identified a dual-specificity histone demethylase that regulates neural differentiation through FGF4.展开更多
Dimethylation of histone H3 lysine 9 （H3K9me2） is an important epigenetic mark associated with transcription repression. Here, we identified PHF8, a JmjC-domain-containing protein, as a histone demethylase specific ...Dimethylation of histone H3 lysine 9 （H3K9me2） is an important epigenetic mark associated with transcription repression. Here, we identified PHF8, a JmjC-domain-containing protein, as a histone demethylase specific for this repressing mark. Recombinant full-length wild type protein could remove methylation from H3K9me2, but mutation of a conserved histidine to alanine H247A abolished the demethylase activity. Overexpressed exogenous PHF8 was colocalized with B23 staining. Endogenous PHF8 was also colocalized with B23 and fibrillarin, two well-established nucleolus proteins, suggesting that PHF8 is localized in the nucleolus and may regulate rRNA transcription. Indeed, PHF8 bound to the promoter region of the rDNA gene. Knockdown of PHF8 reduced the expression of rRNA, and overexpression of the gene resulted in upregulation of rRNA transcript. Concomitantly, H3K9me2 level was elevated in the promoter region of the rDNA gene in PHF8 knockdown cells and reduced significantly when the wild type but not the catalytically inactive H247A mutant PHF8 was overexpressed. Thus, our study identified a histone demethylase for H3K9me2 that regulates rRNA transcription.展开更多
The Raman mode intensities are used to extract the bond polarizabilities which are the indication of the charge disturbance/excitation of the Raman virtual state. A classical formula based on the electric and magnetic...The Raman mode intensities are used to extract the bond polarizabilities which are the indication of the charge disturbance/excitation of the Raman virtual state. A classical formula based on the electric and magnetic dipolar coupling among the charges on the atoms is developed which relates the charges and vibrational amplitudes of the atoms in a normal mode to the Raman optical activity(ROA) mode signatures. By fitting with the experimental ROA signatures, we are able to elucidate the scaling parameter which relates the bond polarizability to the electric charge. The result shows that around40% of the charges in pinane are involved in the Raman process under 532 nm laser excitation.展开更多
Smart meters provide a lot of convenience for both power supply and consumption. Due to the frequent transmission of information, it brings great challenges to the privacy preservation of the user’s household power c...Smart meters provide a lot of convenience for both power supply and consumption. Due to the frequent transmission of information, it brings great challenges to the privacy preservation of the user’s household power consumption data in the smart grid. In order to achieve the anonymity of smart meters. A smart meter privacy preservation scheme based on identity authentication is proposed. The third-party certification authority is introduced in this scheme;it issues pseudonym certificates to realize the identity privacy preservation of smart meters. The masking technology with the Advanced Encryption Standard algorithm is used for data aggregation. The results show that our scheme reduces the computational cost and the communication overhead.展开更多
The fast-developing synthetic biology(SB)has provided many genetic tools to reprogram and engineer cells for improved performance,novel functions,and diverse applications.Such cell engineering resources can play a cri...The fast-developing synthetic biology(SB)has provided many genetic tools to reprogram and engineer cells for improved performance,novel functions,and diverse applications.Such cell engineering resources can play a critical role in the research and development of novel therapeutics.However,there are certain limitations and challenges in applying genetically engineered cells in clinical practice.This literature review updates the recent advances in biomedical applications,including diagnosis,treatment,and drug development,of SB-inspired cell engineering.It describes technologies and relevant examples in a clinical and experimental setup that may significantly impact the biomedicine field.At last,this review concludes the results with future directions to optimize the performances of synthetic gene circuits to regulate the therapeutic activities of cell-based tools in specific diseases.展开更多
基金Supplementary information is linked to the online version of the paper on the Cell Research website.Acknowledgments We thank Anning Lin （The University of Chicago） for the critical reading of the paper, members in the Chen lab for technical help, the cell biology and molecular biology core facilities for confocal study and Q-PCR, and Shanghai Biochip Co Ltd. for microarray analysis. The H3K27me2 antibody was kindly provided by Li Tang （Fudan University） and Thomas Jenuwein （Research Institute of Molecular Pathology, The Vienna Biocenter）. This work was supported by the National Basic Research Program of China （2007CB957900, 2006CB943902, 2007CB947101, 2008KR0695, 2009CB941100, 2005CB522704）, the Chinese Academy of Sciences （KSCX2-YW-R-04）, the National Natural Science Foundation of China （90919026, 30870538,30623003, 30721065, 30830034, 90919046）, the Shanghai Pujiang Program （0757S11361）, the Shanghai Key Project of Basic Science Research （06DJ14001, 06DZ22032, 08DJ1400501）, and the Council of Shanghai Municipal Government for Science and Technology （088014199）.
文摘Dimethylations of histone H3 lysine 9 and lysine 27 are important epigenetic marks associated with transcription repression. Here, we identified KIAA1718 （KDM7A） as a novel histone demethylase specific for these two repressing marks. Using mouse embryonic stem cells, we demonstrated that KIAA1718 expression increased at the early phase of neural differentiation. Knockdown of the gene blocked neural differentiation and the effect was rescued by the wild-type human gene, and not by a catalytically inactive mutant. In addition, overexpression of KIAA1718 accelerated neural differentiation. We provide the evidence that the pro-neural differentiation effect of KDM7A is mediated through direct transcriptional activation of FGF4, a signal molecule implicated in neural differentiation. Thus, our study identified a dual-specificity histone demethylase that regulates neural differentiation through FGF4.
基金Acknowledgments We thank the cell biology core facility for confocal study. The PHF8 antibody was kindly provided by Dr Jiemin Wong （East China Normal University）. This work was supported by the National Basic Research Program of China （2007CB947900, 2010CB529705, 2007CB947100）, the Chinese Academy of Sci- ences （KSCX2-YW-R-04, KSCX2-YW-R-I 11）, the National Natural Science Foundation of China （30870538, 90919026）, Postdoctoral fellowship （20090460670）, and the Council of Shanghai Municipal Government for Science and Technology.
文摘Dimethylation of histone H3 lysine 9 （H3K9me2） is an important epigenetic mark associated with transcription repression. Here, we identified PHF8, a JmjC-domain-containing protein, as a histone demethylase specific for this repressing mark. Recombinant full-length wild type protein could remove methylation from H3K9me2, but mutation of a conserved histidine to alanine H247A abolished the demethylase activity. Overexpressed exogenous PHF8 was colocalized with B23 staining. Endogenous PHF8 was also colocalized with B23 and fibrillarin, two well-established nucleolus proteins, suggesting that PHF8 is localized in the nucleolus and may regulate rRNA transcription. Indeed, PHF8 bound to the promoter region of the rDNA gene. Knockdown of PHF8 reduced the expression of rRNA, and overexpression of the gene resulted in upregulation of rRNA transcript. Concomitantly, H3K9me2 level was elevated in the promoter region of the rDNA gene in PHF8 knockdown cells and reduced significantly when the wild type but not the catalytically inactive H247A mutant PHF8 was overexpressed. Thus, our study identified a histone demethylase for H3K9me2 that regulates rRNA transcription.
基金supported by the National Natural Science Foundation of China (Grant No. 21872097)Scientific Research Base Development Program of the Beijing Municipal Commission of Education。
文摘The Raman mode intensities are used to extract the bond polarizabilities which are the indication of the charge disturbance/excitation of the Raman virtual state. A classical formula based on the electric and magnetic dipolar coupling among the charges on the atoms is developed which relates the charges and vibrational amplitudes of the atoms in a normal mode to the Raman optical activity(ROA) mode signatures. By fitting with the experimental ROA signatures, we are able to elucidate the scaling parameter which relates the bond polarizability to the electric charge. The result shows that around40% of the charges in pinane are involved in the Raman process under 532 nm laser excitation.
文摘Smart meters provide a lot of convenience for both power supply and consumption. Due to the frequent transmission of information, it brings great challenges to the privacy preservation of the user’s household power consumption data in the smart grid. In order to achieve the anonymity of smart meters. A smart meter privacy preservation scheme based on identity authentication is proposed. The third-party certification authority is introduced in this scheme;it issues pseudonym certificates to realize the identity privacy preservation of smart meters. The masking technology with the Advanced Encryption Standard algorithm is used for data aggregation. The results show that our scheme reduces the computational cost and the communication overhead.
基金the National Natural Science Foundation of China(Grant No.81871615).
文摘The fast-developing synthetic biology(SB)has provided many genetic tools to reprogram and engineer cells for improved performance,novel functions,and diverse applications.Such cell engineering resources can play a critical role in the research and development of novel therapeutics.However,there are certain limitations and challenges in applying genetically engineered cells in clinical practice.This literature review updates the recent advances in biomedical applications,including diagnosis,treatment,and drug development,of SB-inspired cell engineering.It describes technologies and relevant examples in a clinical and experimental setup that may significantly impact the biomedicine field.At last,this review concludes the results with future directions to optimize the performances of synthetic gene circuits to regulate the therapeutic activities of cell-based tools in specific diseases.
