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Efficient Amplification and Sequence Analysis of aroA Gene Sequence of Flavobacterium johnsoniae through TAIL-PCR 被引量:2
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作者 刘礼辉 李宁求 +1 位作者 石存斌 吴淑勤 《Agricultural Science & Technology》 CAS 2010年第7期179-182,共4页
[Objective] The aim was to study the sequence of aroA gene (synthetic gene in metabolic pathway of aromatic amino acids) of a pathogenic bacterium (Flavobacterium johnsoniae) causing gill-rote disease.[Method] Gen... [Objective] The aim was to study the sequence of aroA gene (synthetic gene in metabolic pathway of aromatic amino acids) of a pathogenic bacterium (Flavobacterium johnsoniae) causing gill-rote disease.[Method] Genomic DNA of strain M165 of F.johnsoniae was used as a template,three specific nested primers of 5'end and 3'end and arbitrary primer were used to amplify the aroA gene of strain M165 through Thermal asymmetric interlaced PCR (TAIL-PCR).And the obtained sequence was analyzed.[Result] The electrophoresis determination result showed that the size of amplified product was consist with the expected product; sequencing analysis suggested that the full-length of aroA gene was 1 230 bp,enconding 410 amino acids.The amino acid sequence of aroA protein showed the highest level of similarity to amino acids sequence of aroA protein of F.johnsoniae.[Conclusion] TAIL-PCR provided a simple and efficient new method for the cloning of the gene sequence.Obtaining of full-length of aroA gene provided a foundation for further investigation on the effects of nutrition correlation factors such as aroA on the virulence of and virulence of F.johnsoniae. 展开更多
关键词 TAIL-PCR Gill-rote disease flavobacterium johnsoniae aroA gene
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黄杆菌(Flavobacterium sp.)对溴氨酸脱色的研究 被引量:20
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作者 辛宝平 庄源益 +2 位作者 邹其猛 戴树桂 金朝晖 《中国环境科学》 EI CAS CSSCI CSCD 北大核心 2000年第4期332-336,共5页
从受污土壤中筛选出对溴氨酸具有高效脱色能力的黄杆菌BX26.通过监测液体培养基中细胞浊度和溴氨酸吸光度的变化,考察了碳源浓度、溴氨酸浓度和以溴氨酸为唯一碳、氮、硫源时对菌体生长和溴氨酸脱色的影响.结果表明,BX26对... 从受污土壤中筛选出对溴氨酸具有高效脱色能力的黄杆菌BX26.通过监测液体培养基中细胞浊度和溴氨酸吸光度的变化,考察了碳源浓度、溴氨酸浓度和以溴氨酸为唯一碳、氮、硫源时对菌体生长和溴氨酸脱色的影响.结果表明,BX26对溴氨酸的脱色在于酶的催化作用.该脱色酶属诱导性胞外酶.酶的诱导和产生需要液体培养基中有足量的氮源和硫源,但对碳源没有要求.溴氨酸对菌体的生长具有明显的促进作用,同时菌株也表现出很高的溴氨酸脱色活性,可使高达1000mg/L的溴氨酸降解脱色.菌体不能以溴氨酸为唯一碳、氮、硫源,但可以溴氨酸的脱色产物为唯一碳源. 展开更多
关键词 黄杆菌 染料中间体 溴氨酸 脱色 废水处理
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黄杆菌(Flavobacterium sp.)几丁质酶的纯化和性质 被引量:19
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作者 陈三凤 李季伦 《微生物学报》 CAS CSCD 北大核心 1994年第1期14-19,共6页
黄杆菌(Flavobacteium sp.)在几丁质的诱导下产生几丁质酶.通过(NH_4)_2SO_4沉淀、DEAE纤维素柱层析、Sephacryl 300柱层析及Sephadex G-75柱层析,从Flavobacterium sp.培养上清液中分离纯化了几丁质酶.SDS-聚丙烯酰胺凝胶电泳(SDS-PAGE... 黄杆菌(Flavobacteium sp.)在几丁质的诱导下产生几丁质酶.通过(NH_4)_2SO_4沉淀、DEAE纤维素柱层析、Sephacryl 300柱层析及Sephadex G-75柱层析,从Flavobacterium sp.培养上清液中分离纯化了几丁质酶.SDS-聚丙烯酰胺凝胶电泳(SDS-PAGE)纯度分析表明,纯化后的几丁质酶达到了均一的程度.用SDS-PAGE测得该酶的分子量约45D00道尔顿.该酶水解几丁质的最适pH为 7.0,最适温度为50℃,-20C贮存两年以上仍有活性.水解几丁质的Km值为5.0mg/ml.金属离子对几丁质酶活性影响较大,Ca^(2+) 、Co^(2+)’和Cu^(2+)对酶有激活作用.而NH_4^-、Ba^(2+)、Mg^(2+)、Mn^(2+)对酶有抑制作用.几丁质酶水解几丁质的产物是几丁质二糖. 展开更多
关键词 几丁质酶 提纯 黄杆菌属
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黄杆菌(Flavobacteriumsp.)ATCC27551 opd基因在E.coli中的克隆及表达 被引量:7
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作者 陈亚丽 张先恩 刘虹 《武汉大学学报(自然科学版)》 CSCD 北大核心 2001年第2期200-204,共5页
研究了黄杆菌 ATCC2 75 5 1的 opd基因在大肠杆菌中的表达 ,并对于表达产物进行了胞内定位和酶活测定 .通过 PCR扩增和 PCR产物直接克隆 ,将黄杆菌质粒上的一段长达 1137bp的 opd基因进行扩增及克隆 ,然后按正确的读码框亚克隆于表达载... 研究了黄杆菌 ATCC2 75 5 1的 opd基因在大肠杆菌中的表达 ,并对于表达产物进行了胞内定位和酶活测定 .通过 PCR扩增和 PCR产物直接克隆 ,将黄杆菌质粒上的一段长达 1137bp的 opd基因进行扩增及克隆 ,然后按正确的读码框亚克隆于表达载体 p ET2 8b(+ )上 ,转化宿主菌 E.coli BL 2 1(DE3) ,经 IPTG诱导 ,获得了较高量的基因表达产物 .该表达产物以包涵体的形式存在于细胞内 ,通过分离包涵体可以得到电泳较纯的条带 . 展开更多
关键词 黄杆菌 odp基因 克隆 表达 大肠杆菌 胞内定位酶活性 农药降解酶
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聚乙烯醇-海藻酸钠固定Flavobacterium sp.对地表水的修复效果 被引量:1
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作者 李海波 李英华 +3 位作者 王洪 王鑫 邹轶 孙铁珩 《沈阳大学学报(自然科学版)》 CAS 2012年第2期1-5,共5页
从河流底泥、河水水体中分离得到一株黄杆菌Flavobacteriumsp.(Oil 56).用聚乙烯醇(polyvinyl alcohol,PVA)和海藻酸钠(sodium alginates,Na.Alg)为包埋载体,以五硼酸铵和氯酸铁溶液为交联剂,固定黄杆菌Flavobacteriumsp.Oil 56得到固... 从河流底泥、河水水体中分离得到一株黄杆菌Flavobacteriumsp.(Oil 56).用聚乙烯醇(polyvinyl alcohol,PVA)和海藻酸钠(sodium alginates,Na.Alg)为包埋载体,以五硼酸铵和氯酸铁溶液为交联剂,固定黄杆菌Flavobacteriumsp.Oil 56得到固定化球形颗粒.对比研究了固定化颗粒与游离菌对地表水的降解效果,结果表明在COD初始质量浓度为77~205 mg/L时,用固定化Flavobacteriumsp.Oil 56修复48h的COD去除率为48.2%~50.6%,比游离菌的降解效率提高了42.7%~45.8%.利用扫描电镜(SEM)研究了固定化球形颗粒在降解过程中的微环境变化. 展开更多
关键词 固定化微生物 地表水 黄杆菌 微环境
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Antibacterial compounds from Rutaceae with activities against Flavobacterium columnare and Streptococcus iniae 被引量:1
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作者 Kumudini M. Meepagala Kevin K. Schrader Charles L. Burandt 《Journal of Agricultural Chemistry and Environment》 2013年第4期90-100,共11页
From the ethyl acetate extract of Murraya koenegii (Rutaceae) leaves, isomahanine (1) and mahanine (2) were isolated that showed antibacterial activity towards Flavobacterium columnare and Streptococcus iniae which ca... From the ethyl acetate extract of Murraya koenegii (Rutaceae) leaves, isomahanine (1) and mahanine (2) were isolated that showed antibacterial activity towards Flavobacterium columnare and Streptococcus iniae which caused columnaris disease and streptococcosis respectively. Isomahanine was found to have the strongest activity against F. columnare (isolate ALM-00-173) and S. iniae (isolate LA94-426) based on 24-h 50% inhibition concentration (IC50) and minimum inhibition concentration (MIC). Although compound (7), a nicotinamide isolated from Amyris texana had the lowest MIC (2.8 ± 0 mg/L) of any of the test compounds against F. columnare, the 24-h IC50 of 14.8 ± 0.6 mg/L was higher than that of isomahanine and subsequently the 24-h IC50 RDC values for (7) were almost a magnitude of order higher than those obtained for isomahanine. Isomahanine also had the strongest activity against S. iniae, with a 24-h IC50 of 1.3 ± 0.1 mg/L and MIC of 3.5 ± 0 mg/L, respectively. 展开更多
关键词 Murraya koenigii Amyris texana PIPER nigrum COLUMNARIS Disease flavobacterium columnare STREPTOCOCCOSIS STREPTOCOCCUS iniae Aquaculture
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Immunogenicity and protective role of antigenic regions from five outer membrane proteins of Flavobacterium columnare in grass carp Ctenopharyngodon idella 被引量:2
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作者 罗璋 刘志新 +3 位作者 付建平 张秋胜 黄贝 聂品 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2016年第6期1247-1257,共11页
Flavobacterium columnare causes columnaris disease in freshwater fi sh. In the present study, the antigenic regions of fi ve outer membrane proteins(OMPs), including zinc metalloprotease, prolyl oligopeptidase, thermo... Flavobacterium columnare causes columnaris disease in freshwater fi sh. In the present study, the antigenic regions of fi ve outer membrane proteins(OMPs), including zinc metalloprotease, prolyl oligopeptidase, thermolysin, collagenase and chondroitin AC lyase, were bioinformatically analyzed, fused together, and then expressed as a recombinant fusion protein in Escherichia coli. The expressed protein of 95.6 k Da, as estimated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis, was consistent with the molecular weight deduced from the amino acid sequence. The purifi ed recombinant protein was used to vaccinate the grass carp, C tenopharyngodon idella. Following vaccination of the fi sh their Ig M antibody levels were examined, as was the expression of I g M, Ig D and Ig Z immunoglobulin genes and other genes such as MHC Iα and MHC I I β, which are also involved in adaptive immunity. Interleukin genes( IL), including I L- 1β, IL- 8 and I L- 10, and type I and type II interferon(I FN) genes were also examined. At 3 and 4 weeks post-vaccination(wpv), signifi cant increases in Ig M antibody levels were observed in the fi sh vaccinated with the recombinant fusion protein, and an increase in the expression levels of I g M, Ig D and Ig Z genes was also detected following the vaccinations, thus indicating that an adaptive immune response was induced by the vaccinations. Early increases in the expression levels of IL and IFN genes were also observed in the vaccinated fi sh. At four wpv, the fi sh were challenged with F. column a re, and the vaccinated fi sh showed a good level of protection against this pathogen, with 39% relative percent survival(RPS) compared with the control group. It can be concluded, therefore, that the fi ve OMPs, in the form of a recombinant fusion protein vaccine, induced an immune response in fi sh and protection against F. columnare. 展开更多
关键词 flavobacterium columnare outer membrane protein antigen immunogenicity vaccine immune response grass carp
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Involvement of two glycoside hydrolase family 19 members in colony morphotype and virulence in Flavobacterium columnare
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作者 张晓林 李楠 +2 位作者 秦婷 黄贝 聂品 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2017年第6期1511-1523,共13页
Flavobacterium columnare is the pathogenic agent of columnaris disease in aquaculture. Using a recently developed gene deletion strategy, two genes that encode the Glyco hydro_19 domain (GH19 domain) containing prot... Flavobacterium columnare is the pathogenic agent of columnaris disease in aquaculture. Using a recently developed gene deletion strategy, two genes that encode the Glyco hydro_19 domain (GH19 domain) containing proteins, ghd-1 and ghd-2, were deleted separately and together from the F. columnare G4 wild type strain. Surprisingly, the single-, Aghd-1 and Aghd-2, and double-gene mutants, Aghd-1 Aghd-2, all had rhizoid and non-rhizoid colony morphotypes, which we named Aghd-1, Aghd-2, Aghd-1 Aghd-2, and NAghd-1, NAghd-2, and NAghd-1 Aghd-2. However, chitin utilization was not detected in either these mutants or in the wild type. Instead, skimmed milk degradation was observed for the mutants and the wild type; the non-rhizoid strain NAghd-2 exhibited higher degradation activity as revealed by the larger transparent circle on the skimmed milk plate. Using zebrafish as the model organism, we found that non-rhizoid mutants had higher LDs0 values and were less virulent because zebrafish infected with these survived longer. Transcriptome analysis between the non-rhizoid and rhizoid colony morphotypes of each mutant, i.e., NAghd-1 versus (vs) Aghd-1, NAghd-2 vs Aghd-2, and NAghd-1 Aghd-2 vs Aghd-1 Aghd-2, revealed a large number of differentially expressed genes, among which 39 genes were common in three of the pairs compared. Although most of these genes encode hypothetical proteins, a few molecules such as phage tail protein, rhs element Vgr protein, thiol-activated cytolysin, and TonB-dependent outer membrane receptor precursor, expression of which was down-regulated in non-rhizoid mutants but up-regulated in rhizoid mutants, may play a role F. columnare virulence. 展开更多
关键词 flavobacterium columnare GH 19 domain gene deletion rhizoid colony non-rhizoid colony
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Penicillin-G: Efficacy against <i>Flavobacterium psychrophilum</i>and evaluation of lethal dose limits for rainbow trout
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作者 Eric J. Wagner Randall W. Oplinger Matthew Bartley 《Open Journal of Animal Sciences》 2012年第3期150-158,共9页
The effect of penicillin-G on Flavobacterium psychrophilum, the cause of bacterial coldwater disease, was evaluated in 15 min and overnight exposures. Separate tests evaluated the effect of increasing doses of penicil... The effect of penicillin-G on Flavobacterium psychrophilum, the cause of bacterial coldwater disease, was evaluated in 15 min and overnight exposures. Separate tests evaluated the effect of increasing doses of penicillin-G to rainbow trout Oncorhynchus mykiss eggs, fingerlings, and adults. Rainbow trout eggs were exposed for 1 h to penicillin doses of 0, 250, 500, 1,000, 10,000, 50,000, or 100,000 IU/mL. Mean percent hatch ranged from 64.6% to 75.1%, and did not significantly differ among the treatments. Fingerlings were injected intraperitoneally (i.p.) with 200 μL of 0, 1, 10, 100, 1,000, 10,000, 100,000, or 500,000 IU/mL. Probit analysis resulted in a LD10 (lethal dose for 10% of injected fish) of 52,868 IU/mL (95% confidence limits: 31,522 - 69,490 IU/mL) and a LD50 of 131,466 IU/mL (113,095 - 157,878 IU/mL). Brood stock were injected (i.p.) with 200 μL of penicillin at concentrations of 0 (control), 10,000, 50,000, 100,000, 200,000, 400,000, or 800,000 IU/mL. Mortality ranged from 0% to 7% (50,000 IU/mL treatment) and did not significantly differ among treatments. In 28 h exposure tests, penicillin concentrations of ≥ 333 IU/mL were required to completely suppress growth of F. psychrophilum. In 15 min exposures, ≥ 10,000 IU/mL were needed to achieve the same result. Tests indicated that rainbow trout eggs can tolerate 1 h exposures to penicillin-G concentrations as high as 100,000 IU/mL, and that brood fish can tolerate injections of at least 800,000 IU/mL. Fingerling data however, suggested that injection of doses greater than 10,000 IU/mL can be toxic. The data suggests rainbow trout eggs or brood can tolerate high doses of penicillin-G that could be used for controlling the transfer of F. psychrophilum to hatcheries receiving eggs. 展开更多
关键词 flavobacterium psychrophilum PENICILLIN ANTIBIOTICS Toxicity Drug Safety
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Construction of two selectable markers for integrative/conjugative plasmids in Flavobacterium columnare
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作者 张金 邹红 +4 位作者 王良发 黄贝 李楠 王桂堂 聂品 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2012年第2期269-278,共10页
Flavobacterium columnare, the etiological agent of colunmaris disease, is one of the most important and widespread bacterial pathogens of freshwater fish. In this study, we constructed two artificial selectable marke... Flavobacterium columnare, the etiological agent of colunmaris disease, is one of the most important and widespread bacterial pathogens of freshwater fish. In this study, we constructed two artificial selectable markers (chloramphenicol and spectinomycin resistance) for gene transfer in F. columnare. These two new artificial selectable markers, which were created by placing the chloramphenicol or spectinomycin resistance gene under the control of the native acs regulatory region of F. columnare, were functional in both F. columnare and Escherichia coli. The integrative/conjugative plasmids constructed by using these markers were introduced into F. columnare G4 via electroporation or conjugation. The integrated plasmid DNA was confirmed by Southern blotting and PCR analysis. These two markers can be employed in future investigations into gene deletion and the pathogenicity of virulence factors in F. columnare. 展开更多
关键词 flavobacterium columnare selectable marker integrative/conjugative plasmid gene disruption
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Optimization of Zeaxanthin Production by Immobilized <i>Flavobacterium</i>sp. Cells in Fluidized Bed Bioreactor
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作者 Ma Del Carmen Chavez-Parga Alejandro Munguia-Franco +1 位作者 Mayanin Aguilar-Torres Eleazar M. Escamilla-Silva 《Advances in Microbiology》 2012年第4期598-604,共7页
From time immemorial, human beings have used pigments made from vegetables, fruits, superior plants, animal tissues and cereals. One of the greatest sources of pigments is the bacterium that, with the use of the moder... From time immemorial, human beings have used pigments made from vegetables, fruits, superior plants, animal tissues and cereals. One of the greatest sources of pigments is the bacterium that, with the use of the modern technology, has increased the production of metabolites of interest. The microbiological production of carotenoids has not been optimized to obtain pigment production quantities of pigments and carotenoids recovery that lower production costs. The aim of this work was to design a Zeaxanthin production process with Flavobacterium sp. immobilized cells in a fluidized bed bioreactor. An optimum culture medium for Zeaxanthin production in stirred flasks (2.46 g·L–1) was obtained. Furthermore, optimum process conditions for a maximum yield of Zeaxanthin production, by fluidized bed bioreactor, were established. A statistical analysis showed that the most significant factors were air flow, pH and NaCl concentration (4.5 g·L–1). In this study a maximum Zeaxanthin production of 3.8 g·L–1 was reached. The highest reported yield to date was 0.329 g·L–1. 展开更多
关键词 Fluidized Bed BIOREACTOR Orthogonal Design flavobacterium sp. ZEAXANTHIN
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Antibacterial Activity of Acylglucinol Derivatives against Flavobacterium columnare
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作者 Kumudini M. Meepagala Kevin K. Schrader 《Journal of Agricultural Chemistry and Environment》 2014年第3期89-95,共7页
Columnaris (caused by Flavobacterium columnare) is one of the most common bacterial diseases affecting the pond-raised channel catfish (Ictalurus punctatus) in the southeastern United States of America resulting in an... Columnaris (caused by Flavobacterium columnare) is one of the most common bacterial diseases affecting the pond-raised channel catfish (Ictalurus punctatus) in the southeastern United States of America resulting in annual losses of millions of dollars. As part of our continuing effort to discover environmentally benign compounds for the control of columnaris disease, acyl derivatives of phloroglucinol were synthesized and tested against F. columnare using a rapid bioassay. Among the analogs that were tested, diacyl analogs showed very high antibacterial activity against F. columnare in the laboratory bioassay. Diisovaleryl and diisobutyryl analogs were found to have the strongest activity against F. columnare (isolate ALM-00-173) based on 24-h 50% inhibitory concentration (IC50) and minimum inhibitory concentration (MIC). Diisovaleryl and diisobutyryl analogs had IC50 values 0.82 mg/L and 0.80 mg/L, respectively, whereas the drug control florfenicol had an IC50 value of 0.81 mg/L. Diisovaleryl and diisobutyryl analogs also had 24-h relative-to- drug-control IC50 values around 1.0 indicating activities similar to florfenicol, which is included in medicated feed and is one of the current management approach for columnaris. 展开更多
关键词 Acylphloroglucinol COLUMNARIS DISEASE flavobacterium columnare ANTIBACTERIAL AQUACULTURE
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Effects of Supplementation of Dries Bio-Floc as Immuno-Stimulants on Survival Rate of Tilapia Infected with Flavobacterium columnare, VETSV01
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作者 Sulaiman Madyod Suwanna Madyod +3 位作者 Suwit Wuthisuthimethavee Jittawat Rodpun Rujira Makechumphon Paweera Thonglaw 《Journal of Pharmacy and Pharmacology》 2018年第5期526-530,共5页
Objective: The aim of the research was to investigate efficacy of dried bio-floc supplemented with immuno-stimulants as beta-glucan and nucleotide on mortality rate and relative percent survival (RPS) of tilapia in... Objective: The aim of the research was to investigate efficacy of dried bio-floc supplemented with immuno-stimulants as beta-glucan and nucleotide on mortality rate and relative percent survival (RPS) of tilapia infected with Flavobacterium columnare, VETSV01. Materials and Methods: A research was performed in 1-inch long tilapia stimulated its immunity by infection with Flavobacterium columnare, VETSV01. Pathogenesis of 0.2 mL Flavobacterium columnare, VETSV01 in the range of 10^2-10^8 mL-1 fish^-1 was injected into its intraperitoneal injection and intramuscular injection and suitable concentrations were screened to obtain for further experiment in a late restage. Based on data of minimal concentration, 50% mortality rate was caused and it was found the concentration of 108 mL^-1 fish^-1 caused 100% mortality rate and no lethal rate was found in other concentrations. Afterwards, efficacy of bio-floc sediment on survival rate of Tilapia infected with Flavobacterium columnare, VETSV01 was examined. Completely randomized design was employed and experiments were divided into 4 treatment: (1) contxol-commercial feed only, (2) commercial feed attached with dried bio-floc, (3) commercial feed attached with bio-floc and beta-glucan and (4) commercial feed attached with bio-floc and nucleotide. Experiment design was performed as 3 replicates with 10 fishes/replicates in 24 inch glass aquarium. Analysis of difference was performed and determination of mean differences of mortality rate mad relative percent survival was done through Duncan's Multiple Range Test (p 〈 0.05). Results and Discussions: It was demonstrated feeding tilapia with commercial feed in combination with dried bio-floc with or without supplementation of 2 immuno-stimulants could lead to 100% survival rate and 100% relative percent survival rate and it was statistically significant different (p 〈 0.05) compared to control group. Bio-floc product supplemented with beta glucan or nucleotide could effectively stimulate immunity against Flavobacterium columnare, VETSV01 and such high effective performance is viewed as a promising potential product to be further developed and practically employed for sake of aquaculture industry in the near future. 展开更多
关键词 Dries floc TILAPIA flavobacterium columnare VETSV01.
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脱氮菌Flavobacterium sp.FL211T的筛选与硝化特性研究 被引量:7
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作者 甘美君 曾庆鹏 +3 位作者 王海蓉 麦热当.努热苏里坦 赵鑫 胡筱敏 《环境保护与循环经济》 2017年第11期16-21,共6页
从地表土壤中筛选得到1株高效硝化细菌,16S rDNA基因测序与菌株Flavobacterium sasangense YC6274T的亲缘性达到99.7%。结合生理生化分析,确定其属于黄杆菌属,命名为Flavobacterium sp.FL211T。菌株FL211T不但具有异养硝化能力,也具有... 从地表土壤中筛选得到1株高效硝化细菌,16S rDNA基因测序与菌株Flavobacterium sasangense YC6274T的亲缘性达到99.7%。结合生理生化分析,确定其属于黄杆菌属,命名为Flavobacterium sp.FL211T。菌株FL211T不但具有异养硝化能力,也具有好氧反硝化能力,异养硝化能力更突出。菌株FL211T在最佳生长条件(初始pH 7.5、柠檬酸钠为碳源、C/N=5),分别以NH_4^+-N,NO_2^--N和NO_3^--N为唯一氮源的最佳脱氮效率达到49.08%,6.70%和36.46%;在混合氮源条件下,脱氮效率为30.20%。 展开更多
关键词 生物脱氮 硝化 反硝化 黄杆菌 筛选与鉴定
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红树林细菌Flavobacterium sp.的抑藻活性物质鉴定及其对亚历山大藻抑制作用的初步研究 被引量:10
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作者 王以斌 何碧娟 +1 位作者 郑洲 缪锦来 《中国海洋药物》 CAS CSCD 2008年第6期1-4,共4页
目的研究红树林细菌中抑制赤潮藻生长的活性物质。方法利用硅胶柱层析对广西红树林细菌Flavobacteriumsp.产的一种红色抑藻活性物质进行分离和纯化,通过波谱方法和参考文献数据鉴定其分子结构,并对其赤潮藻抑制作用进行了初步研究。结... 目的研究红树林细菌中抑制赤潮藻生长的活性物质。方法利用硅胶柱层析对广西红树林细菌Flavobacteriumsp.产的一种红色抑藻活性物质进行分离和纯化,通过波谱方法和参考文献数据鉴定其分子结构,并对其赤潮藻抑制作用进行了初步研究。结果与结论这种红色抑藻活性物质为灵菌红素。它可明显抑制塔玛亚历山大藻细胞的生长,抑制作用随灵菌红素的浓度加大而显著增强;可促使赤潮藻细胞MDA含量升高,使巯基含量下降,并使藻细胞膜透性增大;可以使赤潮藻细胞膜受到损伤,进而抑制藻细胞生长。 展开更多
关键词 红树林 细菌flavobacterium sp. 次生代谢物 亚历山大藻
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患病异育银鲫中嗜冷黄杆菌的分离鉴定及组织病理学观察
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作者 姜虎成 李润波 +4 位作者 赵彦华 徐晓雁 孙梦玲 夏爱军 薛晖 《水产学报》 CAS CSCD 北大核心 2024年第5期92-104,共13页
为确定越冬期内江苏多地异育银鲫暴发性死亡的原因,本研究利用高通量测序比较了健康样品和患病样品的微生物群落多样性和结构组成的差异,分析了异育银鲫病害暴发过程中的细菌类型及特性。结果显示,在属水平上,患病样品中黄杆菌属丰度最... 为确定越冬期内江苏多地异育银鲫暴发性死亡的原因,本研究利用高通量测序比较了健康样品和患病样品的微生物群落多样性和结构组成的差异,分析了异育银鲫病害暴发过程中的细菌类型及特性。结果显示,在属水平上,患病样品中黄杆菌属丰度最高。在种水平上,患病样品中嗜冷黄杆菌的丰度最高,分别达到63.01%和61.31%,显著高于健康组的1.55%。根据微生物群落特征分析结果,从患病样品体表的病灶处分离出优势病原菌NJ01,通过细菌形态学、生理生化分析、16S rDNA序列比对确定NJ01菌株为嗜冷黄杆菌。人工感染NJ01菌株14 d后,1.7×10^(6)和1.7×10^(7) CFU/mL两组的死亡率达到100%,感染症状和自然发病症状一致。组织病理学观察发现,病鱼的肌细胞坏死,间质中充满了淋巴细胞;肝脏中细胞溶解坏死,细胞核消融;在脾脏中发现脾细胞散在坏死,伴随着充血的症状;肾小管上皮脱落,肾间质存在大量淋巴细胞。药物敏感实验结果显示,NJ01菌株对头孢西叮、头孢哌酮、庆大霉素和克拉霉素等敏感。研究表明,优势菌NJ01是致病菌,可通过扰乱机体正常的免疫和代谢功能导致疾病的发生。本研究首次报道了嗜冷黄杆菌在异育银鲫中的致病性,这将为大宗淡水鱼“越冬综合征”的药物防治及其致病机理研究提供参考依据。 展开更多
关键词 异育银鲫 嗜冷黄杆菌 扩增子分析 分离鉴定 致病性 耐药性
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罗非鱼戴维斯黄杆菌实时定量PCR检测方法的建立及应用
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作者 叶小灵 许莹萱 +3 位作者 王世锋 周永灿 郭伟良 张冬冬 《海南大学学报(自然科学版)》 CAS 2024年第3期258-267,共10页
戴维斯黄杆菌(Flavobacterium davisii)是柱形病病原之一,严重影响罗非鱼养殖产业.为了实现对其快速和准确的诊断,本研究以TonB基因为靶基因构建了重组质粒,建立了戴维斯黄杆菌的实时定量PCR检测方法,并将其应用到罗非鱼感染戴维斯黄杆... 戴维斯黄杆菌(Flavobacterium davisii)是柱形病病原之一,严重影响罗非鱼养殖产业.为了实现对其快速和准确的诊断,本研究以TonB基因为靶基因构建了重组质粒,建立了戴维斯黄杆菌的实时定量PCR检测方法,并将其应用到罗非鱼感染戴维斯黄杆菌后的载菌量测定研究.结果表明:特异性引物TonB-F/R与不同基因型的黄杆菌及罗非鱼其他常见病原无交叉反应,所建立的绝对定量检测方法是常规PCR检测方法灵敏度的100倍,其重复性和稳定性良好;罗非鱼感染戴维斯黄杆菌后其鳃组织载菌量显著高于其他组织,符合该疾病的侵染特点.综上所述,该实时定量PCR检测方法具有快速、高灵敏度和强特异性等优势,可准确评估戴维斯黄杆菌的感染程度,对柱形病的预防具有重要价值. 展开更多
关键词 罗非鱼 戴维斯黄杆菌 实时定量PCR检测
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海洋黄杆菌来源岩藻多糖酶Fcn1的异源表达及酶学性质
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作者 王立平 武俊义 +3 位作者 王莹 秦敏 陈芊汝 陈铁军 《食品科学技术学报》 EI CAS CSCD 北大核心 2024年第4期135-144,共10页
为了寻找和挖掘降解岩藻多糖的新型酶,以从海带中筛选获得的一株可以降解岩藻多糖的海洋黄杆菌Flavobacterium sp.RC2-3为研究对象,对其进行了全基因组测序。通过与已报道的岩藻多糖酶氨基酸序列比对,并进行转录组学分析及实时荧光定量... 为了寻找和挖掘降解岩藻多糖的新型酶,以从海带中筛选获得的一株可以降解岩藻多糖的海洋黄杆菌Flavobacterium sp.RC2-3为研究对象,对其进行了全基因组测序。通过与已报道的岩藻多糖酶氨基酸序列比对,并进行转录组学分析及实时荧光定量PCR验证,挖掘了1个可能的岩藻多糖酶基因,并将其命名为Fcn1。Fcn1基因全长1221 bp,编码406个氨基酸,蛋白分子质量约为46.8 kDa。通过引物设计、PCR扩增,将Fcn1基因克隆,进一步构建了Fcn1基因异源表达载体Fcn1-pET-28a(+),并将其成功地在大肠杆菌BL21(DE3)表达宿主中进行了诱导表达。所得重组酶Fcn1通过带有His标签的镍柱进行分离纯化,采用铁氰化钾法测定纯化酶酶解岩藻多糖的比酶活(332 U/mg),纯化倍数为2.25。酶学性质研究表明,重组酶Fcn1最适反应温度为50℃,最适反应pH值为8.0,在20~30℃和pH值为7.0~8.0时表现出较好的稳定性。结合酶学性质研究结果,确定酶的最适反应条件为30℃,pH值为8.0,并测定了岩藻多糖酶水解反应的动力学参数,K m为1.17 mg/mL,V_(max)为10.53 g·L^(-1)·min^(-1)。该酶降解岩藻多糖的酶活力较高,在岩藻多糖资源的开发领域具有较大应用潜力。 展开更多
关键词 海洋黄杆菌 岩藻多糖酶 基因克隆 异源表达 蛋白纯化 酶学性质
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黄杆菌中浒苔多糖降解有关基因的异源表达及酶活测定
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作者 徐展 刘芳芳 +3 位作者 徐玉雯 闫达中 晁红军 陈静 《武汉轻工大学学报》 CAS 2024年第3期59-65,共7页
浒苔绿潮爆发带来了一系列环境问题,也对浒苔资源的开发利用提出了新挑战。从生物酶法降解浒苔的主要成分浒苔多糖入手,筛选出能降解浒苔多糖的菌株,对其进行16S rRNA基因鉴定,同时对其中表达量上调的木聚糖酶基因(GH43)进行异源表达,... 浒苔绿潮爆发带来了一系列环境问题,也对浒苔资源的开发利用提出了新挑战。从生物酶法降解浒苔的主要成分浒苔多糖入手,筛选出能降解浒苔多糖的菌株,对其进行16S rRNA基因鉴定,同时对其中表达量上调的木聚糖酶基因(GH43)进行异源表达,利用紫外-可见分光光度计比色法进行酶活测定及酶学性质研究。结果表明筛选到的浒苔多糖降解菌为黄杆菌(Algibacter pacificus),克隆表达的木聚糖酶的最适温度为50℃,最适pH约为5,粗酶液酶活为65.71 U/mL。实验可为由浒苔引起的海洋污染治理问题提供理论依据,同时为该菌株及木聚糖酶的工业化利用提供了参考,有利于实现对浒苔的资源化利用。 展开更多
关键词 浒苔多糖 黄杆菌 多糖降解 木聚糖酶
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In situ enhanced bioremediation of dichlorvos by a phyllosphere Flavobacterium strain 被引量:2
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作者 Jiying NING Gang GANG +5 位作者 Zhihui BAI Qing HU Hongyan QI Anzhou MA Xuliang ZHUAN Guoqiang ZHUANG 《Frontiers of Environmental Science & Engineering》 SCIE EI CAS CSCD 2012年第2期231-237,共7页
A bacterium capable of degrading dichlorvos was isolated from the rape phyllosphere and designated YD4. The strain was identified as Flavobacterium sp., based on its phenotypic features and 16S rRNA gene sequence. Str... A bacterium capable of degrading dichlorvos was isolated from the rape phyllosphere and designated YD4. The strain was identified as Flavobacterium sp., based on its phenotypic features and 16S rRNA gene sequence. Strain YD4 was able to utilize dichlorvos as the sole source of phosphorus. In situ enhanced bioremedia- tion of dichlorvos by YD4 was hereafter studied. Chlorpyrifos and phoxim could also be degraded by this strain as the sole phosphorus source. A higher degradation rate of dichlorvos was observed after spraying YD4 onto the surface of rape leaves when compared to the sterilized- YD4 and water-treated samples. The results indicated that pesticide-degrading epiphytic bacterium could become a new way for in situ phyllosphere bioremediation where the hostile niche is unsuitable for other pesticide-degrading bacteria isolated from soil and water. 展开更多
关键词 enhanced bioremediation organophosphoruspesticides PHYLLOSPHERE flavobacterium sp
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