Application of Bayesian Analysis Based on Neural Network and Deep Learning in Data Visualization

This study aims to explore the application of Bayesian analysis based on neural networks and deep learning in data visualization.The research background is that with the increasing amount and complexity of data,traditional data analysis methods have been unable to meet the needs.Research methods include building neural networks and deep learning models,optimizing and improving them through Bayesian analysis,and applying them to the visualization of large-scale data sets.The results show that the neural network combined with Bayesian analysis and deep learning method can effectively improve the accuracy and efficiency of data visualization,and enhance the intuitiveness and depth of data interpretation.The significance of the research is that it provides a new solution for data visualization in the big data environment and helps to further promote the development and application of data science.

Bayesian analysis for mixed-effects model defined by stochastic differential equations

The nonlinear mixed-effects model with stochastic differential equations （SDEs） is used to model the population pharmacokinetic （PPK） data that are extended from ordinary differential equations （ODEs） by adding a stochastic term to the state equation. Compared with the ODEs, the SDEs can model correlated residuals which are ubiquitous in actual pharmacokinetic problems. The Bayesian estimation is provided for nonlinear mixed-effects models based on stochastic differential equations. Combining the Gibbs and the Metropolis-Hastings algorithms, the population and individual parameter values are given through the parameter posterior predictive distributions. The analysis and simulation results show that the performance of the Bayesian estimation for mixed-effects SDEs model and analysis of population pharmacokinetic data is reliable. The results suggest that the proposed method is feasible for population pharmacokinetic data.

Application of evidence theory in information fusion of multiple sources in bayesian analysis

How to obtain proper prior distribution is one of the most critical problems in Bayesian analysis. In many practical cases, the prior information often comes from different sources, and the prior distribution form could be easily known in some certain way while the parameters are hard to determine. In this paper, based on the evidence theory, a new method is presented to fuse the information of multiple sources and determine the parameters of the prior distribution when the form is known. By taking the prior distributions which result from the information of multiple sources and converting them into corresponding mass functions which can be combined by Dempster-Shafer (D-S) method, we get the combined mass function and the representative points of the prior distribution. These points are used to fit with the given distribution form to determine the parameters of the prior distribution. And then the fused prior distribution is obtained and Bayesian analysis can be performed. How to convert the prior distributions into mass functions properly and get the representative points of the fused prior distribution is the central question we address in this paper. The simulation example shows that the proposed method is effective.

Selection of Trusted Service Providers by Enforcing Bayesian Analysis in iVCE

The initiative of internet-based virtual computing environment （iVCE） aims to provide the end users and applications with a harmonions, trustworthy and transparent integrated computing environment which will facilitate sharing and collaborating of network resources between applications. Trust management is an elementary component for iVCE. The uncertain and dynamic characteristics of iVCE necessitate the requirement for the trust management to be subjective, historical evidence based and context dependent. This paper presents a Bayesian analysis-based trust model, which aims to secure the active agents for selecting appropriate trusted services in iVCE. Simulations are made to analyze the properties of the trust model which show that the subjective prior information influences trust evaluation a lot and the model stimulates positive interactions.

Efficacy comparison of different acupuncture methods for herpes zoster: a systematic review and Bayesian analysis

Objective:Acupuncture methods(including moxibustion)are used frequently in the treatment of herpes zoster.However,the choice is usually made only based on personal experience among different acupuncture methods.This study compared the effectiveness of different acupuncture methods for herpes zoster.Methods:All randomized controlled trials(RCTs)of acupuncture methods for herpes zoster were searched in seven databases including Cochrane Library,Embase,PubMed,Web of Science,Wan-fang,CNKI,and CQVIP database.After screening process,effectiveness rate was extracted from all the included RCTs as primary outcomes.The Bayesian network meta-analysis was conducted by GeMTC 0.14.3,Stata13.0 and Review Man 5.3.Results:39 studies were included,which contained 3,042 participants among 11 interventions.Based on the results of network meta-analysis and ranking probability,fire-acupuncture plus electro-acupuncture is considered to be the most effective method,followed by body-acupuncture plus moxibustion,fire-acupuncture,surround-acupuncture plus moxibustion,moxibustion,surround-acupuncture plus western medicine,surround-acupuncture plus electro-acupuncture,body-acupuncture plus western medicine,surround-acupuncture,western medicine,body-acupuncture.Global and local inconsistency test suggested no significant difference between the results of direct and indirect comparisons.Conclusion:Acupuncture methods might be an effective alternative treatment for herpes zoster and fire-acupuncture plus electro-acupuncture might be considered the best option among the included treatments.However,the results of this study need to be interpreted with caution,because there may still be a problem of small sample size of some studies and interventions.Future research,with a standard methodology and design,requires large-scale trials to validate the effect identified in this meta-analysis.

Conditional autoregressive negative binomial model for analysis of crash count using Bayesian methods

In order to improve crash occurrence models to account for the influence of various contributing factors, a conditional autoregressive negative binomial （CAR-NB） model is employed to allow for overdispersion （tackled by the NB component）, unobserved heterogeneity and spatial autocorrelation （captured by the CAR process）, using Markov chain Monte Carlo methods and the Gibbs sampler. Statistical tests suggest that the CAR-NB model is preferred over the CAR-Poisson, NB, zero-inflated Poisson, zero-inflated NB models, due to its lower prediction errors and more robust parameter inference. The study results show that crash frequency and fatalities are positively associated with the number of lanes, curve length, annual average daily traffic （AADT） per lane, as well as rainfall. Speed limit and the distances to the nearest hospitals have negative associations with segment-based crash counts but positive associations with fatality counts, presumably as a result of worsened collision impacts at higher speed and time loss during transporting crash victims.

Bayesian data analysis to quantify the uncertainty of intact rock strength

One of the main difficulties in the geotechnical design process lies in dealing with uncertainty. Uncertainty is associated with natural variation of properties, and the imprecision and unpredictability caused by insufficient information on parameters or models. Probabilistic methods are normally used to quantify uncertainty. However, the frequentist approach commonly used for this purpose has some drawbacks.First, it lacks a formal framework for incorporating knowledge not represented by data. Second, it has limitations in providing a proper measure of the confidence of parameters inferred from data. The Bayesian approach offers a better framework for treating uncertainty in geotechnical design. The advantages of the Bayesian approach for uncertainty quantification are highlighted in this paper with the Bayesian regression analysis of laboratory test data to infer the intact rock strength parameters σand mused in the Hoek-Brown strength criterion. Two case examples are used to illustrate different aspects of the Bayesian methodology and to contrast the approach with a frequentist approach represented by the nonlinear least squares(NLLS) method. The paper discusses the use of a Student’s t-distribution versus a normal distribution to handle outliers, the consideration of absolute versus relative residuals, and the comparison of quality of fitting results based on standard errors and Bayes factors. Uncertainty quantification with confidence and prediction intervals of the frequentist approach is compared with that based on scatter plots and bands of fitted envelopes of the Bayesian approach. Finally, the Bayesian method is extended to consider two improvements of the fitting analysis. The first is the case in which the Hoek-Brown parameter, a, is treated as a variable to improve the fitting in the triaxial region. The second is the incorporation of the uncertainty in the estimation of the direct tensile strength from Brazilian test results within the overall evaluation of the intact rock strength.

Bayesian analysis of series system with dependent causes of failure

Most studies of series system assume the causes of failure are independent,which may not hold in practice.In this paper,dependent causes of failure are considered by using a Marshall-Olkin bivariateWeibull distribution.We derived four reference priors based on several grouping orders.Gibbs sampling combined with the rejection sampling algorithm and Metropolis-Hastings algorithm is developed to obtain the estimates of the unknown parameters.The proposed approach is compared with the maximum-likelihood method via simulation.We find that the root-meansquared errors of the Bayesian estimates are much smaller for the case of small sample size,and that the coverage probabilities of the Bayesian estimates are much closer to the nominal levels.Finally,a real data-set is analysed for illustration.

Objective Bayesian analysis for the accelerated degradation model usingWiener process with measurement errors

The Wiener process as a degradation model plays an important role in the degradation analysis.In this paper, we propose an objective Bayesian analysis for an acceleration degradation Wienermodel which is subjected to measurement errors. The Jeffreys prior and reference priors underdifferent group orderings are first derived, the propriety of the posteriors is then validated. It isshown that two of the reference priors can yield proper posteriors while the others cannot. A simulation study is carried out to investigate the frequentist performance of the approach comparedto the maximum likelihood method. Finally, the approach is applied to analyse a real data.

Bayesian analysis for quantile smoothing spline

In Bayesian quantile smoothing spline[Thompson,P.,Cai,Y.,Moyeed,R.,Reeve,D.,&Stander,J.(2010).Bayesian nonparametric quantile regression using splines.Computational Statistics and Data Analysis,54,1138-1150.],a fixed-scale parameter in the asymmetric Laplace likelihood tends to result in misleading fitted curves.To solve this problem,we propose a new Bayesian quantile smoothing spline(NBQSS),which considers a random scale parameter.To begin with,we justify its objective prior options by establishing one sufficient and one necessary condition of the posterior propriety under two classes of general priors including the invariant prior for the scale component.We then develop partially collapsed Gibbs sampling to facilitate the compu-tation.Out of a practical concern,we extend the theoretical results to NBQSS with unobserved knots.Finally,simulation studies and two real data analyses reveal three main findings.Firstly,NBQSS usually outperforms other competing curve fitting methods.Secondly,NBQSS consid-ering unobserved knots behaves better than the NBQSS without unobserved knots in terms of estimation accuracy and precision.Thirdly,NBQSS is robust to possible outliers and could provide accurate estimation.

Bayesian discriminant analysis for prediction of coal and gas outbursts and application

Based on the principle of Bayesian discriminant analysis, we established a model of Bayesian discriminant analysis for predicting coal and gas outbursts. We selected five major indices which affect outbursts, i.e., initial speed of methane diffusion, a consistent coal coefficient, gas pressure, destructive style of coal and mining depth, as discriminating factors of the model. In our model, we divided the type of coal and gas outbursts into four grades regarded as four normal populations. We then obtained the corresponding discriminant functions through training a set of data from engineering examples as learning samples and evaluated their criteria by a back substitution method to verify the optimal properties of the model. Finally, we applied the model to the prediction of coal and gas outbursts in the Yunnan Enhong Mine. Our results coincided completely with the actual situation. These results show that a model of Bayesian discriminant analysis has excellent recognition performance, high prediction accuracy and a low error rate and is an effective method to predict coal and gas outbursts.

BAYESIAN DEMONSTRATION TEST METHOD WITH MIXED BETA DISTRIBUTION

A complex mechatronics system Bayesian plan of demonstration test is studied based on the mixed beta distribution. During product design and improvement various information is appropriately considered by introducing inheritance factor, moreover, the inheritance factor is thought as a random variable, and the Bayesian decision of the qualification test plan is obtained, and the correctness of a Bayesian model presented is verified. The results show that the quantity of the test is too conservative according to classical methods under small binomial samples. Although traditional Bayesian analysis can consider test information of related or similar products, it ignores differences between such products. The method has solved the above problem, furthermore, considering the requirement in many practical projects, the differences among this method, the classical method and Bayesian with beta distribution are compared according to the plan of reliability acceptance test.

Bayesian synthetic evaluation of multistage reliability growth with instant and delayed fix modes

In the multistage reliability growth tests with instant and delayed fix modes, the failure data can be assumed to follow Weibull processes with different parameters at different stages. For the Weibull process within a stage, by the proper selection of prior distribution form and the parameters, a concise posterior distribution form is obtained, thus simplifying the Bayesian analysis. In the multistage tests, the improvement factor is used to convert the posterior of one stage to the prior of the subsequent stage. The conversion criterion is carefully analyzed to determine the distribution parameters of the subsequent stage＇s variable reasonably. Based on the mentioned results, a new synthetic Bayesian evaluation program and algorithm framework is put forward to evaluate the multistage reliability growth tests with instant and delayed fix modes. The example shows the effectiveness and flexibility of this method.

Bayesian method for system reliability assessment of overlapping pass/fail data

For high reliability and long life systems, system pass/fail data are often rare. Integrating lower-level data, such as data drawn from the subsystem or component pass/fail testing,the Bayesian analysis can improve the precision of the system reliability assessment. If the multi-level pass/fail data are overlapping,one challenging problem for the Bayesian analysis is to develop a likelihood function. Since the computation burden of the existing methods makes them infeasible for multi-component systems, this paper proposes an improved Bayesian approach for the system reliability assessment in light of overlapping data. This approach includes three steps： fristly searching for feasible paths based on the binary decision diagram, then screening feasible points based on space partition and constraint decomposition, and finally simplifying the likelihood function. An example of a satellite rolling control system demonstrates the feasibility and the efficiency of the proposed approach.

Bayesian Variable Selection for Mixture Process Variable Design Experiment

This paper discussed Bayesian variable selection methods for models from split-plot mixture designs using samples from Metropolis-Hastings within the Gibbs sampling algorithm. Bayesian variable selection is easy to implement due to the improvement in computing via MCMC sampling. We described the Bayesian methodology by introducing the Bayesian framework, and explaining Markov Chain Monte Carlo (MCMC) sampling. The Metropolis-Hastings within Gibbs sampling was used to draw dependent samples from the full conditional distributions which were explained. In mixture experiments with process variables, the response depends not only on the proportions of the mixture components but also on the effects of the process variables. In many such mixture-process variable experiments, constraints such as time or cost prohibit the selection of treatments completely at random. In these situations, restrictions on the randomisation force the level combinations of one group of factors to be fixed and the combinations of the other group of factors are run. Then a new level of the first-factor group is set and combinations of the other factors are run. We discussed the computational algorithm for the Stochastic Search Variable Selection (SSVS) in linear mixed models. We extended the computational algorithm of SSVS to fit models from split-plot mixture design by introducing the algorithm of the Stochastic Search Variable Selection for Split-plot Design (SSVS-SPD). The motivation of this extension is that we have two different levels of the experimental units, one for the whole plots and the other for subplots in the split-plot mixture design.

Relative accuracy of spatial predictive models for lynx Lynx canadensis derived using logistic regression-AIC,multiple criteria evaluation and Bayesian approaches

We compared probability surfaces derived using one set of environmental variables in three Geographic Information Systems （GIS） -based approaches： logistic regression and Akaike＇s Information Criterion （AIC）, Multiple Criteria Evaluation （MCE）, and Bayesian Analysis （specifically Dempster-Shafer theory）. We used lynx Lynx canadensis as our focal species, and developed our environment relationship model using track data collected in Banff National Park, Alberta, Canada, during winters from 1997 to 2000. The accuracy of the three spatial models were compared using a contingency table method. We determined the percentage of cases in which both presence and absence points were correctly classified （overall accuracy）, the failure to predict a species where it occurred （omission error） and the prediction of presence where there was absence （commission error）. Our overall accuracy showed the logistic regression approach was the most accurate （74.51%）. The multiple criteria evaluation was intermediate （39.22%）, while the Dempster-Shafer （D-S） theory model was the poorest （29.90%）. However, omission and commission error tell us a different story： logistic regression had the lowest commission error, while D-S theory produced the lowest omission error. Our results provide evidence that habitat modellers should evaluate all three error measures when ascribing confidence in their model. We suggest that for our study area at least, the logistic regression model is optimal. However, where sample size is small or the species is very rare, it may also be useful to explore and/or use a more ecologically cautious modelling approach （e.g. Dempster-Shafer） that would over-predict, protect more sites, and thereby minimize the risk of missing critical habitat in conservation plans .

Bayesian Computation for the Parameters of a Zero-Inflated Cosine Geometric Distribution with Application to COVID-19 Pandemic Data

A new three-parameter discrete distribution called the zero-inflated cosine geometric(ZICG)distribution is proposed for the first time herein.It can be used to analyze over-dispersed count data with excess zeros.The basic statistical properties of the new distribution,such as the moment generating function,mean,and variance are presented.Furthermore,confidence intervals are constructed by using the Wald,Bayesian,and highest posterior density(HPD)methods to estimate the true confidence intervals for the parameters of the ZICG distribution.Their efficacies were investigated by using both simulation and real-world data comprising the number of daily COVID-19 positive cases at the Olympic Games in Tokyo 2020.The results show that the HPD interval performed better than the other methods in terms of coverage probability and average length in most cases studied.

A Bayesian Approach for Stable Distributions:Some Computational Aspects

In this work, we study some computational aspects for the Bayesian analysis involving stable distributions. It is well known that, in general, there is no closed form for the probability density function of stable distributions. However, the use of a latent or auxiliary random variable facilitates to obtain any posterior distribution when being related to stable distributions. To show the usefulness of the computational aspects, the methodology is applied to two examples: one is related to daily price returns of Abbey National shares, considered in [1], and the other is the length distribution analysis of coding and non-coding regions in a Homo sapiens chromosome DNA sequence, considered in [2]. Posterior summaries of interest are obtained using the OpenBUGS software.

Non-Homogeneous Poisson Processes Applied to Count Data:A Bayesian Approach Considering Different Prior Distributions

This article discusses the Bayesian approach for count data using non-homogeneous Poisson processes, considering different prior distributions for the model parameters. A Bayesian approach using Markov Chain Monte Carlo (MCMC) simulation methods for this model was first introduced by [1], taking into account software reliability data and considering non-informative prior distributions for the parameters of the model. With the non-informative prior distributions presented by these authors, computational difficulties may occur when using MCMC methods. This article considers different prior distributions for the parameters of the proposed model, and studies the effect of such prior distributions on the convergence and accuracy of the results. In order to illustrate the proposed methodology, two examples are considered: the first one has simulated data, and the second has a set of data for pollution issues at a region in Mexico City.

Proximity to corridors benefits bird communities in vegetated interrow vineyards in Mendoza, Argentina

Management under ecological schemes and increasing habitat heterogeneity,are essential for enhancing biodiversity in vineyards.Birds provide several contributions to agriculture,for example pest control,recreation and enhancing human mental health,and have intrinsic value.Birds are also ideal model organisms because they are easy to survey,and species respond differently to agricultural land use at different scales.Vegetated borders of crops are key for many species of birds,and distance to the border have been found to be an important factor in vineyard-dominated agroecosystems.We evaluate if there are differences in the bird assemblage,between the interior compared to borders within vineyards,using a hierarchical community occupancy model.We hypoth-esized that occupancy of birds is greater in environments with greater heterogeneity,which in this study was considered to be contributed by the proximity to vegetated corridors.We expected that vineyard borders close to corridors will have higher bird occupancy than the center of the vineyard.The research was conducted in three vineyards with biodiversity-friendly management practices,in Gualtallary,Mendoza,Argentina.Bird surveys were conducted over three breeding seasons from 2018 to 2020.Occupancy and richness of the bird community was more closely associated with the borders adjacent to the corridors than with the interior of the vineyards,as we initially predicted,although the assemblage of birds did not differ much.More than 75%of the registered species consume exclusively or partially invertebrates.Biodiversity-friendly management and ecological schemes,together with vegetated corridors provide multiple benefits for biodiversity conservation.These ap-proaches not only minimize the use of agrochemicals but also prioritize soil cover with spontaneous vegetation,which supports a diverse community of insectivorous bird species,potentially contributing to pest control.