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Assessment of pathogenicity and functional characterization of APPL1 gene mutations in diabetic patients
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作者 Ping Shi Yang Tian +7 位作者 Feng Xu Lu-Na Liu Wan-Hong Wu Ying-Zhou Shi An-Qi Dai Hang-Yu Fang Kun-Xia Li Chao Xu 《World Journal of Diabetes》 SCIE 2024年第2期275-286,共12页
BACKGROUND Adaptor protein,phosphotyrosine interacting with PH domain and leucine zipper 1(APPL1)plays a crucial role in regulating insulin signaling and glucose metabolism.Mutations in the APPL1 gene have been associ... BACKGROUND Adaptor protein,phosphotyrosine interacting with PH domain and leucine zipper 1(APPL1)plays a crucial role in regulating insulin signaling and glucose metabolism.Mutations in the APPL1 gene have been associated with the development of maturity-onset diabetes of the young type 14(MODY14).Currently,only two mutations[c.1655T>A(p.Leu552*)and c.281G>A p.(Asp94Asn)]have been identified in association with this disease.Given the limited understanding of MODY14,it is imperative to identify additional cases and carry out comprehensive research on MODY14 and APPL1 mutations.AIM To assess the pathogenicity of APPL1 gene mutations in diabetic patients and to characterize the functional role of the APPL1 domain.METHODS Patients exhibiting clinical signs and a medical history suggestive of MODY were screened for the study.Whole exome sequencing was performed on the patients as well as their family members.The pathogenicity of the identified APPL1 variants was predicted on the basis of bioinformatics analysis.In addition,the pathogenicity of the novel APPL1 variant was preliminarily evaluated through in vitro functional experiments.Finally,the impact of these variants on APPL1 protein expression and the insulin pathway were assessed,and the potential mechanism underlying the interaction between the APPL1 protein and the insulin receptor was further explored.RESULTS A total of five novel mutations were identified,including four missense mutations(Asp632Tyr,Arg633His,Arg532Gln,and Ile642Met)and one intronic mutation(1153-16A>T).Pathogenicity prediction analysis revealed that the Arg532Gln was pathogenic across all predictions.The Asp632Tyr and Arg633His variants also had pathogenicity based on MutationTaster.In addition,multiple alignment of amino acid sequences showed that the Arg532Gln,Asp632Tyr,and Arg633His variants were conserved across different species.Moreover,in in vitro functional experiments,both the c.1894G>T(at Asp632Tyr)and c.1595G>A(at Arg532Gln)mutations were found to downregulate the expression of APPL1 on both protein and mRNA levels,indicating their pathogenic nature.Therefore,based on the patient’s clinical and family history,combined with the results from bioinformatics analysis and functional experiment,the c.1894G>T(at Asp632Tyr)and c.1595G>A(at Arg532Gln)mutations were classified as pathogenic mutations.Importantly,all these mutations were located within the phosphotyrosinebinding domain of APPL1,which plays a critical role in the insulin sensitization effect.CONCLUSION This study provided new insights into the pathogenicity of APPL1 gene mutations in diabetes and revealed a potential target for the diagnosis and treatment of the disease. 展开更多
关键词 Adaptor protein phosphotyrosine interacting with PH domain and leucine zipper 1 Maturity-onset diabetes of the young Bioinformatics analysis gene mutation domain
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Molecular investigation of exoU and exoY virulence genes in Pseudomonas aeruginosa collected from hospitalized patients in North of Iran:A descriptive-analytical study
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作者 Ahmad Reza Moradi Mehrdad Gholami +2 位作者 Lotfollah Davoodi Negar Hajilou Hamid Reza Goli 《Journal of Acute Disease》 2024年第2期74-80,共7页
Objective:To investigate the frequency of exoU and exoY genes in patients with Pseudomonas aeruginosa infection.Methods:In this study,100 clinical isolates of Pseudomonas aeruginosa were collected from patients hospit... Objective:To investigate the frequency of exoU and exoY genes in patients with Pseudomonas aeruginosa infection.Methods:In this study,100 clinical isolates of Pseudomonas aeruginosa were collected from patients hospitalized in educational-therapeutic hospitals and were identified using standard microbiological tests.Then,the antibiotic resistance pattern of the isolates was determined by the disk agar diffusion method.The bacterial DNAs were extracted by the alkaline lysis method.Finally,the presence of exoU and exoY genes was evaluated by the PCR test.Results:In this study,47%,72%,29%,39%,40%,and 44%of the isolates were non-susceptible to piperacillin,aztreonam,ceftazidime,imipenem,tobramycin,and ciprofloxacin,respectively.In addition,95%and 93%of the clinical isolates carried the exoU and exoY genes.Blood and fecal isolates had both virulence genes,while only one wound isolate had neither genes.Meanwhile,all urinary isolates contained the exoY gene and only one isolate lacked the exoU gene.Also,88 isolates simultaneously had both exoU and exoY genes.Conclusions:High prevalence of exoU and exoY genes in this region indicates a significant role of typeⅢsecretion system in pathogenesis of Pseudomonas aeruginosa.The typeⅢsecretion system may be a suitable target to reduce the pathogenicity of this bacterium. 展开更多
关键词 Pseudomonas aeruginosa exoU exoY Virulence gene Typesecretion system PCR
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RhD变异型DⅥ Ⅲ型分子生物学研究
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作者 张烨 李晓菲 +2 位作者 刘婷婷 许志远 郑仲男 《北京医学》 CAS 2023年第10期913-916,共4页
目的探讨RhD变异型DⅥⅢ型的分子生物学机制。方法选取2020年11月至2022年5月北京市红十字血液中心血型室接收的RhD血型弱阳性患者血样。使用3个厂家的单克隆抗-D(1个IgM、2个IgM/IgG抗-D)检测患者RhD血型,其中IgM抗-D采用盐水试管法(sa... 目的探讨RhD变异型DⅥⅢ型的分子生物学机制。方法选取2020年11月至2022年5月北京市红十字血液中心血型室接收的RhD血型弱阳性患者血样。使用3个厂家的单克隆抗-D(1个IgM、2个IgM/IgG抗-D)检测患者RhD血型,其中IgM抗-D采用盐水试管法(saline tube method,S)、IgG抗-D采用间接抗人球蛋白试验(indirect anti-human globulin test,IAT);采用直接抗人球蛋白分型卡和Rh分型卡检测患者直抗(direct anti-human globulin test,DAT)和RhCcEe抗原。采用实时荧光定量聚合酶链式反应(polymerase chain reaction,PCR)检测RHD基因缺失情况、RHD基因10个外显子全序列及其相邻侧翼内含子测序分析样本RHD基因型。结果共纳入RhD血型弱阳性患者血样8份,盐水试管法均只与一个厂家的抗-D试剂(IgM/IgG抗-D)呈弱阳性反应,IgM抗-D和另一家IgM/IgG抗-D阴性;IAT与2个厂家的抗-D试剂(IgM/IgG抗-D)均4+;DAT均阴性;RhCcEe表型分别为Ccee(6/8)、ccee(1/8)、CcEe(1/8)。实时荧光定量PCR结果均为RHD基因外显子E3~E6缺失,RHD基因外显子全序列测序均为RHD^(*)06.03.01。结论通过分子生物学方法对RHD基因的检测能准确鉴定为DⅥⅢ型,为受血者和供血者在临床输血中提供不同的保障策略。 展开更多
关键词 RhD变异型 DⅥ 实时荧光定量聚合酶链式反应 基因测序
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Designing and Cloning of the Gene Sequence Encoding Silk Fibroin Amorphous Domain 被引量:3
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作者 黄海燕 田智芳 +2 位作者 裔洪根 杨云星 王建南 《Journal of Donghua University(English Edition)》 EI CAS 2012年第6期489-492,共4页
To provide materials used in investigating the relationship between amino acid compositions of silk-like protein, structure, and functions, especially the biological functions, the motif genes encoding the silk fibroi... To provide materials used in investigating the relationship between amino acid compositions of silk-like protein, structure, and functions, especially the biological functions, the motif genes encoding the silk fibroin amorphous domain, SGFGPVANGGSGEASSESDFGSSGFGPVANASSGEASSESDFAG(F) were designed and extended using a "head-to-tail" construction strategy. The designed genes were cloned into PSLFA1180FA and multimerized to form structures containing a two-timer, a four-timer, an eight-timer, and a twelve-timer. All the resulting plasmids were digested using the restriction enzyme BamHI and the double-enzymes BglII/HindIII. Restriction enzyme analysis and DNA sequencing revealed the motif was successfully cloned into PSLFA1180FA and multimerized to form a twelve-timer without gene deletion or mutation. 展开更多
关键词 Escherichia coli silk fibroin amorphous domain gene cloning DNA electrophoresis
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Two mutations in the truncated Rep gene RBR domain delayed the Wheat dwarf virus infection in transgenic barley plants
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作者 Pavel Cejnar Ludmila Ohnoutkova +2 位作者 Jan Ripl Tomas Vlcko Jiban Kumar Kundu 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2018年第11期2492-2500,共9页
Wheat dwarf virus (WDV), an important cereal pathogen, is closely related to Maize streak virus (MSV), a model virus of the Mastrevirus genus. Based on its similarity to known MSV resistance strategies, a truncate... Wheat dwarf virus (WDV), an important cereal pathogen, is closely related to Maize streak virus (MSV), a model virus of the Mastrevirus genus. Based on its similarity to known MSV resistance strategies, a truncated part of the WDV replication- associated (RepA) gene (WDVRepA215) and the WDV RepA gene with a mutated retinoblastoma-related protein (RBR) interaction domain (WDVRepA215RBRre^t) were cloned into the plPKb002 expression vector and transformed into immature embryos of spring barley cv. Golden Promise plants through Agrobacterium-mediated transformation. A detailed study of T1-generation plants infected by leafhoppers (Psammotettix alienus) fed on infection sources of variable strength was performed over a 5-week period encompassing the initial stages of virus infection. A DNA WDV TaqMan qPCR assay normalized using the DNA puroindoline-b SYBR Green qPCR assay for samples on a per week basis revealed an approximately 2-week delay in WDVRepA215RBR^mut plants to WDVRepA215 plants before significant increases in the WDV viral levels occurred. Both WDVRepA215 and WDVRepA215RBR^mut plants showed similar levels of transgenic transcripts over the screened period; however, the transgenic plants also showed increased numbers of infected plants compared to the control plants. 展开更多
关键词 Wheat dwarf virus (WDV) truncated Rep gene RBR domain qPCR screening
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An enriched environment increases the expression of fibronectin type Ⅲ domain-containing protein 5 and brain-derived neurotrophic factor in the cerebral cortex of the ischemic mouse brain 被引量:12
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作者 Ke-Wei Yu Chuan-Jie Wang +7 位作者 Yi Wu Yu-Yang Wang Nian-Hong Wang Shen-Yi Kuang Gang Liu Hong-Yu Xie Cong-Yu Jiang Jun-Fa Wu 《Neural Regeneration Research》 SCIE CAS CSCD 2020年第9期1671-1677,共7页
Many studies have shown that fibronectin type III domain-containing protein 5(FDNC5) and brain-derived neurotrophic factor(BDNF) play vital roles in plasticity after brain injury. An enriched environment refers to an ... Many studies have shown that fibronectin type III domain-containing protein 5(FDNC5) and brain-derived neurotrophic factor(BDNF) play vital roles in plasticity after brain injury. An enriched environment refers to an environment that provides animals with multi-sensory stimulation and movement opportunities. An enriched environment has been shown to promote the regeneration of nerve cells, synapses, and blood vessels in the animal brain after cerebral ischemia;however, the exact mechanisms have not been clarified. This study aimed to determine whether an enriched environment could improve neurobehavioral functions after the experimental inducement of cerebral ischemia and whether neurobehavioral outcomes were associated with the expression of FDNC5 and BDNF. This study established ischemic mouse models using permanent middle cerebral artery occlusion(pMCAO) on the left side. On postoperative day 1, the mice were randomly assigned to either enriched environment or standard housing condition groups. Mice in the standard housing condition group were housed and fed under standard conditions. Mice in the enriched environment group were housed in a large cage, containing various toys, and fed with a standard diet. Sham-operated mice received the same procedure, but without artery occlusion, and were housed and fed under standard conditions. On postoperative days 7 and 14, a beam-walking test was used to assess coordination, balance, and spatial learning. On postoperative days 16–20, a Morris water maze test was used to assess spatial learning and memory. On postoperative day 15, the expression levels of FDNC5 and BDNF proteins in the ipsilateral cerebral cortex were analyzed by western blot assay. The results showed that compared with the standard housing condition group, the motor balance and coordination functions(based on beam-walking test scores 7 and 14 days after operation), spatial learning abilities(based on the spatial learning scores from the Morris water maze test 16–19 days after operation), and memory abilities(based on the memory scores of the Morris water maze test 20 days after operation) of the enriched environment group improved significantly. In addition, the expression levels of FDNC5 and BDNF proteins in the ipsilateral cerebral cortex increased in the enriched environment group compared with those in the standard housing condition group. Furthermore, the Pearson correlation coefficient showed that neurobehavioral functions were positively associated with the expression levels of FDNC5 and BDNF(r = 0.587 and r = 0.840, respectively). These findings suggest that an enriched environment upregulates FDNC5 protein expression in the ipsilateral cerebral cortex after cerebral ischemia, which then activates BDNF protein expression, improving neurological function. BDNF protein expression was positively correlated with improved neurological function. The experimental protocols were approved by the Institutional Animal Care and Use Committee of Fudan University, China(approval Nos. 20160858 A232, 20160860 A234) on February 24, 2016. 展开更多
关键词 beam-walking test brain-derived neurotrophic factor cerebral ischemia correlation analysis enriched environment fibronectin typedomain-containing protein 5 Morris water maze task neural plasticity NEUROPROTECTION permanent middle cerebral artery occlusion
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Two memory associated genes regulated by amyloid precursor protein intracellular domain Novel insights into the pathogenesis of learning and memory impairment in Alzheimer's disease
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作者 Chuandong Zheng Xi Gu Zhimei Zhong Rui Zhu Tianming Gao Fang Wang 《Neural Regeneration Research》 SCIE CAS CSCD 2012年第5期341-346,共6页
In this study, we employed chromatin immunoprecipitation, a useful method for studying the locations of transcription factors bound to specific DNA regions in specific cells, to investigate amyloid precursor protein i... In this study, we employed chromatin immunoprecipitation, a useful method for studying the locations of transcription factors bound to specific DNA regions in specific cells, to investigate amyloid precursor protein intracellular domain binding sites in chromatin DNA from hippocampal neurons of rats, and to screen out five putative genes associated with the learning and memory functions. The promoter regions of the calcium/calmodulin-dependent protein kinase II alpha and glutamate receptor-2 genes were amplified by PCR from DNA products immunoprecipitated by amyloid precursor protein intracellular domain. An electrophoretic mobility shift assay and western blot analysis suggested that the promoter regions of these two genes associated with learning and memory were bound by amyloid precursor protein intracellular domain (in complex form). Our experimental findings indicate that the amyloid precursor protein intracellular domain is involved in the transcriptional regulation of learning- and memory-associated genes in hippocampal neurons. These data may provide new insights into the molecular mechanism underlying the symptoms of progressive memory loss in Alzheimer's disease. 展开更多
关键词 Alzheimer's disease amyloid precursor protein amyloid precursor protein intracellular domain chromatin immunoprecipitation gene regulation chromatin DNA
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Expression of Major Antigen Domains of E2 Gene of CSFV and Analysis of its Immunological Activity 被引量:1
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作者 Hong TIAN Xiang-tao LIU Jing-yan WU You-jun SHANG Tao JIANG Hai-xue ZHENG Qing-ge XIE 《Virologica Sinica》 SCIE CAS CSCD 2008年第4期247-254,共8页
E2 is an envelope glycoprotein of Classical swine fever virus (CSFV) and contains sequential neutralizing epitopes to induce virus-neutralizing antibodies and mount protective immunity in the natural host. In this stu... E2 is an envelope glycoprotein of Classical swine fever virus (CSFV) and contains sequential neutralizing epitopes to induce virus-neutralizing antibodies and mount protective immunity in the natural host. In this study, four antigen domains (ABCD) of the E2 gene was cloned from CSFV Shimen strain into the retroviral vector pBABE puro and expressed in eukaryotic cell (PK15) by an retroviral gene expression system, and the activity of recombinant E2 protein to induce immune responses was evaluated in rabbits. The results indicated that recombinant E2 protein can be recognized by fluorescence antibodies of CSFV and CSFV positive serum (Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, China) using Western blot, indirect immunofluorescence antibody test (IFAT) and ELISA, Furthermore, anti-CSFV specific antibodies and lymphocyte proliferation were elicited and increased by recombinant protein after vaccination. In the challenge test, all of rabbits vaccinated with recombinant protein and Chinese vaccine strain (C-strain) were fully protected from a rabbit spleen virus challenge. These results indicated that a retroviral-based epitope-vaccine carrying the major antigen domains of E2 is able to induce high level of epitope-specific antibodies and exhibits similar protective capability with that induced by the C-strain, and encourages further work towards the development of a vaccine against CSFV infection. 展开更多
关键词 猪瘟病毒 E2基因 抗原 逆转录酶病毒 免疫活性
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Domain Ⅲ of Dengue Virus Serotype 2 Envelope: Expression at High Levels in Escherichia coli and Competitive Inhibition of Virus Entry
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作者 Yong-hong Yang Xue-li Zheng +3 位作者 Lei-zi Qing Pin-ting Zhu Jing Pan Lei Luo 《国际感染病学(电子版)》 CAS 2013年第3期114-122,共9页
Obejective The domainⅢof dengue virus type 2 envelope was cloned and expressed in Escherichia coli and the inhibited effects of recombinant protein on virus was detected. Methods In this study, the domainⅢ(DⅢ) pro... Obejective The domainⅢof dengue virus type 2 envelope was cloned and expressed in Escherichia coli and the inhibited effects of recombinant protein on virus was detected. Methods In this study, the domainⅢ(DⅢ) protein of the dengue virus type-2 (DENV-2) envelope (E) antigen was expressed in Escherichia coli by fusion with a carrier protein. The protein was puriifed using enzymatic cleavage and afifnity puriifcation. Rabbit immunization and antibody detection was carried out. Inhibition of DENV-2 infection was observed by DENV-2 EDⅢprotein and its immunity rabbits serum. Results The recombinant expression DENV-2 EDⅢ protein plasmid was constructed successfully. After isopropyl thiogalactoside induction, a speciifc soluble 29 kD protein was obtained, and the expression product accounted for 68.87%of the total protein of the cell lysate. Western blot demonstrated the reactivity of the recombinant protein with his-tag and DENV (Ⅰ-Ⅳ) monoclonal antibodies. The protein was puriifed using enzymatic cleavage and affinity purification. The purified recombinant EDⅢ protein inhibited the entry of DENV-2 into BHK-21 cells. DENV-2 plaque neutralization assays were carried out using serially diluted antibodies against EDⅢprotein. At a 1︰16 dilution, the antibodies produced at least 90%neutralization of the DENV-2 virus. Furthermore, the antibodies continued to exhibit high neutralization effects (approximately 80%) until the anti-EDⅢantibody titer reached 1︰1 024. Conclusions DENV-2 EDⅢwas cloned and expressed successfully. DENV-2 EDⅢprotein could be useful in the development of inexpensive dengue vaccine. The data also suggested that DENV-2 employed an attachment molecule or receptor for its entry into C6/36 mosquito cells. 展开更多
关键词 Dengue virus Envelope domain Virus entry VACCINE Neutralizing antibodies
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电子商务新利器HP DomainⅢ
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《软件世界》 1998年第7期 78-79,共2页
惠普公司在原有 HP Domain 的基础上,向业界正式推出了 HP Domain Ⅲ、全称是:HP Domain 商务平台/Web QoS。HPDomain Ⅲ是惠普公司面向电子商务应用专门推出的关键型 Internet 解決方案。
关键词 电子商务 信息基础设施 domain 商业自动化
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双孢蘑菇中一种4R型MYB转录因子的基因克隆和生物信息学分析
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作者 刘翔 赵紫璇 +5 位作者 赵月盈 赵诗睿 贾子怡 姜含越 袁帅 孟德梅 《食品研究与开发》 CAS 2024年第2期185-194,共10页
MYB转录因子广泛存在于真核生物中,在植物的生长发育、逆境胁迫等过程中发挥重要作用。与植物相比,对食用菌中MYB转录因子的研究有限。为探究MYB转录因子在食用菌中的生物学功能,对前期转录组发现的一个编码双孢蘑菇(Agaricus bisporus)... MYB转录因子广泛存在于真核生物中,在植物的生长发育、逆境胁迫等过程中发挥重要作用。与植物相比,对食用菌中MYB转录因子的研究有限。为探究MYB转录因子在食用菌中的生物学功能,对前期转录组发现的一个编码双孢蘑菇(Agaricus bisporus)MYB转录因子的基因进行克隆和生物信息学分析。结果表明,该基因编码区长1209 bp,翻译402个氨基酸;编码的蛋白分子量为45.95 kDa,等电点9.17,是一种不存在跨膜结构、不含信号肽的亲水性蛋白,具有4个高度保守的SANT结构域,属于4R型MYB转录因子,与白环蘑(Leucoagaricus)中的4RMYB转录因子亲缘关系最近;二级结构预测显示以无规则卷曲和α-螺旋结构为主;亚细胞定位分析显示该转录因子位于细胞核中;此外启动子序列分析表明,该基因启动子区域含有多个与生物抗逆应答、激素响应等相关的顺式作用元件。 展开更多
关键词 双孢蘑菇 MYB转录因子 基因克隆 生物信息学分析 保守结构域
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非小细胞肺癌组织EMSY、PIDD表达与同源重组修复基因的相关性及其临床意义
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作者 陈丽萍 项保利 +3 位作者 王布 姬泽萱 郭志青 赵建清 《疑难病杂志》 CAS 2024年第2期186-191,共6页
目的研究非小细胞肺癌(NSCLC)组织中EMSY转录抑制因子(EMSY)、p53诱导的死亡结构域蛋白1(PIDD)表达与同源重组修复基因表达的相关性及临床意义。方法选择2022年1月—2023年4月河北北方学院附属第一医院呼吸与危重症医学科诊治NSCLC患者8... 目的研究非小细胞肺癌(NSCLC)组织中EMSY转录抑制因子(EMSY)、p53诱导的死亡结构域蛋白1(PIDD)表达与同源重组修复基因表达的相关性及临床意义。方法选择2022年1月—2023年4月河北北方学院附属第一医院呼吸与危重症医学科诊治NSCLC患者80例。采用实时荧光定量PCR检测癌组织及癌旁组织中EMSY、PIDD表达与同源重组修复基因人乳腺癌易感基因1(BRCA1)、切除修复交叉互补基因1(ERCC1),核糖核苷酸还原酶亚单位1(RRM1)表达。Pearson相关分析EMSY、PIDD表达与同源重组修复基因表达的相关性;分析EMSY、PIDD表达与NSCLC临床病理相关参数的关系及在NSCLC诊断中的价值。结果NSCLC癌组织中EMSY、PIDD、BRCA1、ERCC1、RRM1 mRNA相对表达量均高于癌旁组织(t/P=30.176/<0.001,27.821/<0.001,25.075/<0.001,16.680/<0.001,25.610/<0.001)。NSCLC癌组织中EMSY、PIDD mRNA与BRCA1、ERCC1、RRM1 mRNA表达均呈正相关(r/P=0.654/<0.001,0.712/<0.001,0.584/<0.001;0.724/<0.001,0.661/<0.001,0.563/<0.001)。低分化程度、有淋巴结转移及TNM分期Ⅲ期NSCLC癌组织EMSY、PIDD mRNA表达分别显著高于高中分化程度、无淋巴结转移及TNM分期Ⅰ~Ⅱ期NSCLC癌组织(t/P=13.693/<0.001,13.380/<0.001,12.197/<0.001;10.289/<0.001,11.130/<0.001,9.405/<0.001)。EMSY、PIDD mRNA及两项联合诊断NSCLC的AUC分别为0.834、0.802、0.906,两项联合诊断的AUC大于单一指标(Z=4.751、5.257,P均<0.001)。结论EMSY、PIDD在NSCLC癌组织中表达升高,与同源重组修复基因表达及不良临床病理特征有关,两者联合有助于NSCLC的诊断。 展开更多
关键词 非小细胞肺癌 EMSY p53诱导的死亡结构域蛋白1 同源重组修复基因 诊断
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急性冠脉综合征患者血清sST2及NLRP3水平与介入术后无复流-慢血流的相关性分析
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作者 雷锐 殷实 李志 《现代检验医学杂志》 CAS 2024年第4期121-125,154,共6页
目的探讨急性冠脉综合征(acute coronary syndrome,Acs)患者血清可溶性生长刺激表达基因蛋白2(soluble growth stimulation expression gene 2 protein,sST2),核苷酸寡聚化结构域样受体热蛋白结构域相关蛋白3(nucleotide oligomerizatio... 目的探讨急性冠脉综合征(acute coronary syndrome,Acs)患者血清可溶性生长刺激表达基因蛋白2(soluble growth stimulation expression gene 2 protein,sST2),核苷酸寡聚化结构域样受体热蛋白结构域相关蛋白3(nucleotide oligomerization domain like receptor heat protein domain associated protein 3,NLRP3)水平与经皮冠状动脉介入治疗(percutaneous coronary intervention,PCI)术后无复流-慢血流的关系。方法选择2020年1月~2022年12月佳木斯市中心医院收治的97例急性冠脉综合征患者,所有患者均接受PCI治疗,根据术后无复流-慢血流发生情况分为无复流-慢血流组(n=20)和对照组(n=77)。术前检测血清sST2及NLRP3水平,分析影响急性冠脉综合征患者PCI术后无复流-慢血流的因素以及sST2,NLRP3预测急性冠脉综合征患者PCI术后无复流-慢血流的价值。结果无复流-慢血流组血清sST2(14.32±2.65 ng/ml vs 11.02±2.13 ng/ml),NLRP3(68.23±10.17 pg/ml vs 42.05±8.23 pg/ml)水平高于对照组,差异具有统计学意义(t=5.860,12.055,均P<0.05)。多因素Logistic回归分析显示高血栓负荷(OR:7.791,95%CI:2.834~21.421)、高水平sST2(OR=2.071,95%CI:1.146~3.743)、高水平NLRP3(OR=2.008,95%CI:1.228~3.284)是急性冠脉综合征患者PCI术后无复流-慢血流的危险因素(均P<0.05)。sST2,NLRP3诊断急性冠脉综合征患者PCI术后无复流-慢血流的临界值分别为12.91ng/ml,55.39 pg/ml,曲线下面积分别为0.737,0.686,联合sST2,NLRP3诊断急性冠脉综合征患者PCI术后无复流-慢血流的曲线下面积为0.907,高于单独诊断(Z=2.662,2.856,均P<0.05)。结论急性冠脉综合征患者血清sST2,NLRP3水平增高与PCI术后无复流-慢血流的发生有关,联合检测sST2和NLRP3可提高对术后无复流-慢血流的诊断效能。 展开更多
关键词 急性冠脉综合征 经皮冠状动脉介入术 无复流-慢血流 可溶性生长刺激表达基因蛋白2 核苷酸寡聚化结构域样受体热蛋白结构域相关蛋白3
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海洋链霉菌酮合成酶结构域基因的克隆及分析
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作者 薛永常 许佳 +1 位作者 刘永亮 刘长斌 《微生物学杂志》 CAS CSCD 北大核心 2024年第1期50-57,共8页
海洋链霉菌通过聚酮合酶(PKS)合成许多结构和功能多样且具有药用价值的聚酮化合物(PKs),酮合成酶结构域(KS)作为PKS的核心结构域,可催化底物与伸长的聚酮之间的脱羧缩合,在聚酮化合物生物合成中起着重要作用。本文通过对从海洋链霉菌Str... 海洋链霉菌通过聚酮合酶(PKS)合成许多结构和功能多样且具有药用价值的聚酮化合物(PKs),酮合成酶结构域(KS)作为PKS的核心结构域,可催化底物与伸长的聚酮之间的脱羧缩合,在聚酮化合物生物合成中起着重要作用。本文通过对从海洋链霉菌Streptomyces sp.X66基因组DNA克隆获得的ks基因的生物信息学分析表明,该ks基因序列长945 bp,BLAST序列比对显示其具有典型的酮合酶结构域的功能区域。理化分析显示其拟编码309个氨基酸,理论等电点为6.60,原子组成为C1401H2239N425O419S8,不稳定指数为42.11,平均亲水系数为0.112,编码产物为酸性疏水不稳定蛋白,且不含信号肽和跨膜结构,二级结构以无规则卷曲和α-螺旋为主,SDS-PAGE显示其分子量约为55 kDa。通过对ks基因的研究,为进一步解析聚酮化合物合成代谢中的调控机制及组合生物学和体外酶系合成聚酮化合物提供参考。 展开更多
关键词 海洋链霉菌 聚酮合酶 酮合成酶结构域 基因克隆 生物信息学
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抑制lncRNA TUG1下调核苷酸结合寡聚结构域样受体蛋白1炎症小体在延缓阿尔茨海默病进展的作用
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作者 马婷婷 陈建红 +1 位作者 刘爱翠 李海宁 《解剖学报》 CAS CSCD 2024年第1期32-42,共11页
目的探讨敲低长链非编码RNA(lncRNA)牛磺酸上调基因1(TUG1)抑制核苷酸结合寡聚结构域样受体蛋白1(NLRP1)炎症小体在缓解阿尔茨海默病进展中的作用。方法选取9~10周龄遗传背景为C57/BL6的野生型小鼠(WT组,10只)或淀粉样前体蛋白(APP)/早... 目的探讨敲低长链非编码RNA(lncRNA)牛磺酸上调基因1(TUG1)抑制核苷酸结合寡聚结构域样受体蛋白1(NLRP1)炎症小体在缓解阿尔茨海默病进展中的作用。方法选取9~10周龄遗传背景为C57/BL6的野生型小鼠(WT组,10只)或淀粉样前体蛋白(APP)/早老素1(PS1)转基因小鼠(30只)。APP/PS1转基因小鼠随机分为模型(model)组,模型+敲低lncRNA TUG1组[model+lncRNA TUG1短发夹RNA(shRNA)组]和model+shRNA非靶标(NT)组,每组10只。分别采集12周龄第1天(3月龄)和32周龄第1天(8月龄)小鼠外周血和脑皮质组织,并分离皮质中的原代小胶质细胞和原代星形胶质细胞,每个时间点每组5只小鼠。Real-time PCR分别测定3月龄和8月龄上述4个分组小鼠脑皮质组织和原代小胶质细胞中lncRNA TUG1和巨噬细胞移动抑制因子(MIF)mRNA的水平,以及原代星形胶质细胞中补体蛋白C1r和C1s mRNA的水平。ELISA法测定其外周血浆中MIF含量。对3月龄和8月龄小鼠脑皮质原代小胶质细胞和原代星形胶质细胞共培养。CCK-8法测定上述2种细胞的增殖能力。Western blotting分别测定3月龄和8月龄上述4个分组小鼠脑皮质组织中MIF、白细胞介素1β前体(pro-IL-1β)、凋亡相关斑点样蛋白(ASC)、Caspase-1(p20)、Caspase-1(full)、NLRP1及NLRP3蛋白的表达水平。采用免疫荧光染色法测定8月龄各分组小鼠脑皮质组织中β淀粉样蛋白(Aβ)表达。结果3月龄和8月龄时,与WT组小鼠相比,model组小鼠脑皮质组织和原代小胶质细胞中lncRNA TUG1和MIF相对表达水平显著上调,原代小胶质细胞和原代星形胶质细胞增殖能力增强(P<0.05)。与model组相比,model+lncRNA TUG1 shRNA组小鼠脑皮质组织和原代小胶质细胞中lncRNA TUG1和MIF的相对表达水平显著降低,原代小胶质细胞和原代星形胶质细胞增殖能力降低(P<0.05)。与WT组相比,model组小鼠外周血浆中MIF含量显著升高;小鼠脑皮质组织中pro-IL-1β、ASC、Caspase-1(p20)、Caspase-1(full)、NLRP1以及NLRP3的蛋白表达水平显著升高;Aβ免疫荧光强度明显增强(P<0.05)。与model组相比,model+lncRNA TUG1 shRNA组小鼠外周血浆中MIF含量显著降低;小鼠脑皮质组织中pro-IL-1β、ASC、Caspase-1(p20)、Caspase-1(full)和NLRP1的蛋白表达水平显著降低,Aβ免疫荧光强度明显降低(P<0.05),而NLRP3蛋白质的表达水平无明显变化(P>0.05)。与model组相比,model+shRNA NT组小鼠上述所有检测指标差异均无显著性(P>0.05)。结论APP/PS1转基因小鼠脑皮质组织和原代小胶质细胞中lncRNA TUG1和MIF因子表达上调与脑皮质内NLRP1炎症小体激活成正相关,敲低lncRNA TUG1可缓解阿尔茨海默病的进展。 展开更多
关键词 阿尔茨海默病 长链非编码RNA 牛磺酸上调基因1 巨噬细胞移动抑制因子 核苷酸结合寡聚结构域样受体蛋白1 免疫印迹法 小鼠
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lncRNA HAGLR促卵巢癌细胞生长和上皮-间充质转化的机制研究
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作者 李俊 王晓黎 +1 位作者 俞岩 周俏苗 《局解手术学杂志》 2024年第6期491-496,共6页
目的研究长链非编码RNA同源盒D基因簇反义生长相关长链非编码RNA(lncRNA HAGLR)通过调控核苷酸结合寡聚化结构域样受体家族pyrin结构域蛋白3(NLRP3)炎症小体对卵巢癌细胞生长和上皮-间充质转化(EMT)的调控作用。方法培养卵巢正常细胞IOS... 目的研究长链非编码RNA同源盒D基因簇反义生长相关长链非编码RNA(lncRNA HAGLR)通过调控核苷酸结合寡聚化结构域样受体家族pyrin结构域蛋白3(NLRP3)炎症小体对卵巢癌细胞生长和上皮-间充质转化(EMT)的调控作用。方法培养卵巢正常细胞IOSE-80(IOSE-80组)以及卵巢癌细胞A2780(A2780组)。然后将A2780随机分为lncRNA HAGLR沉默组(siHAGLR组)、沉默阴性对照组(siNC组)、siHAGLR联合NLRP3抑制剂MCC950处理组(siHAGLR+MCC950组)。qRT-PCR法检测lncRNA HAGLR的表达。Western blot检测NLRP3炎症小体相关蛋白NLRP3、caspase-1、ASC和EMT相关蛋白Vimentin、Snail1、α-SMA、Twist1的表达。CCK-8法检测A2780细胞的增殖活性。Transwell法检测A2780细胞的迁移和侵袭能力。细胞克隆形成实验检测A2780细胞的生长能力。TUNEL染色检测A2780细胞的凋亡。结果与IOSE-80组相比,A2780组lncRNA HAGLR、Vimentin、Snail1、α-SMA、Twist1表达均上调(P<0.05),但NLRP3、caspase-1、ASC的表达均下调(P<0.05)。与siNC组相比,siHAGLR组的lncRNA HAGLR、Vimentin、Snail1、α-SMA、Twist1表达均下调(P<0.05),但NLRP3、caspase-1、ASC的表达均上调(P<0.05),细胞增殖率、细胞克隆数以及迁移和侵袭数均明显减少(P<0.05),细胞凋亡数则增加(P<0.05)。与siHAGLR组相比,siHAGLR+MCC950组的lncRNA HAGLR表达无明显变化(P>0.05),而Vimentin、Snail1、α-SMA、Twist1表达均上调(P<0.05),但NLRP3、caspase-1、ASC的表达均下调(P<0.05),细胞增殖率、细胞克隆数以及迁移和侵袭数均显著增加(P<0.05),细胞凋亡数则减少(P<0.05)。结论lncRNA HAGLR通过抑制NLRP3炎症小体促进卵巢癌细胞的生长和EMT。 展开更多
关键词 长链非编码RNA同源盒D基因簇反义生长相关长链非编码RNA 核苷酸结合寡聚化结构域样受体家族pyrin结构域蛋白3 炎症小体 卵巢癌细胞 上皮-间充质转化
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绿脓杆菌PA-SD-1株外毒素AⅢ区基因的克隆及序列分析 被引量:3
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作者 李雅林 牛钟相 +1 位作者 姜世金 常维山 《中国预防兽医学报》 CAS CSCD 北大核心 2002年第5期338-340,共3页
利用PCR技术 ,以绿脓杆菌羊分离株 (暂命名为PA_SD_1株 )的染色体DNA为模板 ,成功扩增出了该菌的主要致病基因 (绿脓杆菌外毒素A)Ⅲ区基因。将该PCR扩增片段与pGEMR_TEasy载体连接 ,获得了含有目的片段的重组质粒 (命名为PA_SD_ETA)。... 利用PCR技术 ,以绿脓杆菌羊分离株 (暂命名为PA_SD_1株 )的染色体DNA为模板 ,成功扩增出了该菌的主要致病基因 (绿脓杆菌外毒素A)Ⅲ区基因。将该PCR扩增片段与pGEMR_TEasy载体连接 ,获得了含有目的片段的重组质粒 (命名为PA_SD_ETA)。序列测定结果表明。该菌株与其他已报道的绿脓杆菌菌株有较高的同源性 ,而局部出现单个碱基的点突变。 展开更多
关键词 绿脓杆菌 PA-SD-1株 外毒素 A区基因 克隆 序列分析
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瑞氏木霉内切葡聚糖酶Ⅲ基因的克隆及在酿酒酵母中的表达 被引量:29
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作者 肖志壮 王婷 +2 位作者 汪天虹 曲音波 高培基 《微生物学报》 CAS CSCD 北大核心 2001年第4期391-396,共6页
采用刚果红染色法从瑞氏木霉cDNA文库中分离到一株具有CMCase活性的阳性克隆 ,测序结果显示该基因所编码的蛋白质为瑞氏木霉内切葡聚糖酶Ⅲ (EGⅢ )。对重组酿酒酵母所产生的EGⅢ进行了酶学性质分析 ,其最适pH为 5 0 ,最适温度为 60℃... 采用刚果红染色法从瑞氏木霉cDNA文库中分离到一株具有CMCase活性的阳性克隆 ,测序结果显示该基因所编码的蛋白质为瑞氏木霉内切葡聚糖酶Ⅲ (EGⅢ )。对重组酿酒酵母所产生的EGⅢ进行了酶学性质分析 ,其最适pH为 5 0 ,最适温度为 60℃。检测了酿酒酵母蛋白质分泌系统组分SSO2和SEB1对EGⅢ分泌的影响。结果表明 ,在可过量表达蛋白质分泌系统组分SSO2的酿酒酵母H837中 ,EGⅢ的分泌量最高。由此分析 ,酿酒酵母SSO2蛋白可能在EGⅢ的分泌中 ,是一个限速步骤。通过PCR方法删除EGⅢ基因 5′端非翻译区的 98bp核苷酸序列使EGⅢ表达量提高了 5 3倍。这提示我们 ,瑞氏木霉的EGⅢ基因在酿酒酵母细胞中表达时 ,其mRNA 5′端先导序列中可能存在影响该基因表达水平的调控序列。 展开更多
关键词 内切葡聚糖酶 瑞氏木霉 酿酒酵母 基因表达 蛋白质分泌
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低密度脂蛋白受体基因NcoⅠ、ApoC-Ⅲ基因SacⅠ多态性与动脉粥样硬化脑梗死关系(英文) 被引量:8
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作者 郭阳 郑东明 +3 位作者 刘晓梅 卢岩 潘丽丽 李强 《中国现代医学杂志》 CAS CSCD 北大核心 2006年第5期641-644,共4页
目的探讨低密度脂蛋白受体(LDL-R)基因和载脂蛋白(Apo)CⅢ基因多态性与动脉粥样硬化性脑梗死(ACI)的关系。方法用聚合酶链反应(PCR)技术检测了中国辽宁籍汉族健康人104例和ACI患者77的LDL-R基因NcoⅠ、apoCⅢ基因SacI多态性及血脂、脂... 目的探讨低密度脂蛋白受体(LDL-R)基因和载脂蛋白(Apo)CⅢ基因多态性与动脉粥样硬化性脑梗死(ACI)的关系。方法用聚合酶链反应(PCR)技术检测了中国辽宁籍汉族健康人104例和ACI患者77的LDL-R基因NcoⅠ、apoCⅢ基因SacI多态性及血脂、脂蛋白含量。结果对照组N+及S+等位基因频率为0.667、0.274;ACI组为0.662、0.329,差异无显著性(P>0.05),但ACI组S-S+与N-N+N+N+联合存在时的频率为0.45,显著高于对照组(P<0.05),致ACI的发病相对风险率(RR)为4.2(P<0.05),致血清TG、TC、LDL-C升高的RR依次为14.30、9.40、17.40。结论LDL-R基因N-N+N+N+、apoCⅢ基因S-S+联合存在与ACI患者血清高TG、高TC、高LDL-C相关,可能是致ACI的遗传易患因子。 展开更多
关键词 低密度脂蛋白 载脂蛋白C 受体 基因 动脉粥样硬化 脑梗死
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猪传染性胸膜肺炎放线杆菌毒素apxⅢA基因的克隆和表达 被引量:8
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作者 邵美丽 刘思国 +4 位作者 王春来 郭洋 张秀华 郭设平 佟恒敏 《中国预防兽医学报》 CAS CSCD 北大核心 2006年第2期139-141,共3页
以猪传染性胸膜肺炎放线杆菌血清2型参考株基因组DNA为模板,PCR方法扩增出apxⅢA基因3.1kb的片段,扩增产物克隆于pMD18-T中,重组质粒经酶切鉴定后进行核苷酸序列测定,并与GenBank中不同血清型胸膜肺炎放线杆菌apxⅢA基因进行比较,结果... 以猪传染性胸膜肺炎放线杆菌血清2型参考株基因组DNA为模板,PCR方法扩增出apxⅢA基因3.1kb的片段,扩增产物克隆于pMD18-T中,重组质粒经酶切鉴定后进行核苷酸序列测定,并与GenBank中不同血清型胸膜肺炎放线杆菌apxⅢA基因进行比较,结果显示核苷酸同源性均在96%以上。将该基因片段亚克隆到原核表达载体pGEX-6P-1的BamHⅠ/SalⅠ位点,成功构建了重组表达载体pGEX-apxⅢA,转化大肠杆菌BL-21(DE3)中并获得表达。SDS-PAGE结果显示,表达的融合蛋白分子量约为140Ku,与预测相符,Westernblot证明该融合蛋白具有免疫学活性。该融合蛋白的成功表达为猪传染性胸膜肺炎亚单位疫苗的研制奠定了基础。 展开更多
关键词 猪胸膜肺炎放线杆菌 apxA基因
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