In most studies of tunnel boring machine(TBM)tunnelling, the groundwater pressure was not considered, or was simplified and exerted on the boundary of lining structure. Meanwhile, the leakage, which mainly occurs in t...In most studies of tunnel boring machine(TBM)tunnelling, the groundwater pressure was not considered, or was simplified and exerted on the boundary of lining structure. Meanwhile, the leakage, which mainly occurs in the segment joints, was often ignored in the relevant studies of TBM tunnelling. Additionally, the geological models in these studies were simplified to different extents, and mostly were simplified as homogenous bodies. Considering the deficiencies above, a 3D refined model of the surrounding rock of a tunnel is firstly established using NURBS-TIN-BRe P hybrid data structure in this paper. Then the seepage field of the surrounding rock considering the leakage in the segment joints is simulated. Finally, the stability of TBM water diversion tunnel is studied coupled with the seepage simulation, to analyze the stress-strain conditions, the axial force and the bending moment of tunnel segment considering the leakage in the segment joints. The results illustrate that the maximum radial displacement, the minimum principal stress, the maximum principal stress and the axial force of segment lining considering the seepage effect are all larger than those disregarding the seepage effect.展开更多
On the Cavally River, located on the border between C?te d’Ivoire and Liberia, several hydraulic structures such as bridges and diversion channels are planned to be made in recent years in the operating perimeter of ...On the Cavally River, located on the border between C?te d’Ivoire and Liberia, several hydraulic structures such as bridges and diversion channels are planned to be made in recent years in the operating perimeter of the Ity mining company. A 1D-2D hydraulic model was developed to design a diversion channel to cut a meander of the Cavally River in order to ensure hydraulic operation similar to the initial conditions of the river (water levels, flow and velocities). This model was designed with a flow rate of 240 m3/s and a Manning coefficient of 0.052 m1/3·s-1 for the minor bed and 0.06 m1/3·s-1 for the major bed. The results from the hydraulic model show that the hydraulic conditions (water levels, velocities) in the channel before and after the diversion remain almost like those of the Cavally River.展开更多
Picea mongolica W. D. Xu is an endemic and endangered species which is only found in semi-arid areas of northern China. It has been widely used as an afforestation tree in the establishment of the Three-North Shelterb...Picea mongolica W. D. Xu is an endemic and endangered species which is only found in semi-arid areas of northern China. It has been widely used as an afforestation tree in the establishment of the Three-North Shelterbelt System for its adaptation to arid soils and as a virescent tree in urban gardens and streets for its beautiful shape. Due to different microenvironments, P. mongolica populations may differentiate into many ecological groups with different adaptive abilities. Long-term adaptation to a dry environment makes P. mongolica differentiate into different ecotypes. Typical ecotypes are P. mongolica f. purpurea （Fp）, P. mongolica f. rubra （Fr） and P. mongolica f. viridis （Fv）. Our results show that cone size is clearly not uniform among different ecotypes; the largest cones are found in the Fv ecotype and the smallest in Fp. There were also distinct differences between these ecotypes in terms of height and length of squama. At the molecular level, the zymograms of peroxidase and lipase prove the existence of different ecotypes in P. mongolica. The results are useful for investigating and managing this rare spruce species in China.展开更多
Indigenous pigs in South China are valuable genetic resources with many specific and unique characters, which have played an important role in the establishment of some western modern pig breeds. However, the origin a...Indigenous pigs in South China are valuable genetic resources with many specific and unique characters, which have played an important role in the establishment of some western modern pig breeds. However, the origin and genetic diversity of indigenous pigs in South China have not been fully understood. In the present study, we sequenced 534 novel mitochondrial DNA (mtDNA) D-loop and assembled 54 complete mitogenome sequences for all 17 indigenous pig breeds from Fujian, Guangdong, Guangxi and Hainan in South China. These data were analyzed together with previously published homologous sequences relevant to this study. We found that all 13 coding genes of the mitogenomes were under purifying selection, but ND1 had the most variable sites and CYTB contained the most non-synonymous SNPs. Phylogenetic analysis showed that all indigenous pigs in South China were clustered into the D haplogroup with D1a1, D1b, D1c and D1e sub-haplogroups found to be dominant. Haplotype and nucleotide diversities of D-loop sequences ranged from 0.427 to 0.899 and from 0.00342 to 0.00695, respectively, among which all pigs in Guangdong had the lowest diversity. The estimates of pairwise FST, gene flow (Nm) and genetic distance (Da) indicated that most of these indigenous pig breeds differentiated from each other significantly (P<0.05). Among the western modern breeds, Berkshire and Yorkshire had significant Asian matrilineal footprints from indigenous pigs in South China, especially the Spotted pigs distributed in Guangdong and Guangxi. The neutrality test (Fu’s FS) indicated that indigenous pigs from Fujian and Guangxi had gone through recent population expansion events (P<0.05). It is concluded that indigenous pigs in South China were most likely derived from the Mekong region and the middle and downstream regions of Yangtze River through Guangxi and Fujian. Our findings provide a complete and in-depth insight on the origin and distribution pattern of maternal genetic diversity of indigenous pigs in South China.展开更多
Taro is an important crop species in C<span style="white-space:nowrap;">ô</span>te d’Ivoire. It is cultivated for its tubers and leaves. But its knowledge and genetic diversity and diff...Taro is an important crop species in C<span style="white-space:nowrap;">ô</span>te d’Ivoire. It is cultivated for its tubers and leaves. But its knowledge and genetic diversity and differentiation are very weakly documented. Several morphological types are found in rural area, but their identification is not very clear, and their agronomic potentiality is underexploited. In this context we initiated a survey and collected 213 accessions from 14 growing regions of C<span style="white-space:nowrap;">ô</span>te d’Ivoire. The diversity was evaluated based on seven qualitative traits of leaves (Shape of the base of the leaf, Predominant position (shape) of the leaf blade surface, Margin of the leaf blade, Leaf blade variegation, Profile of the petiolar junction, Shape of the leaf sheath, Shape of the appendix) during an experimentation conducted in rural area. The objective of this study was to characterize the collection of taros collected in different geographical zones of C<span style="white-space:nowrap;">ô</span>te d’Ivoire and identify the genera cultivated. Results of our study indicated that excepted margin of the leaf blade all traits are very discriminant. Several variants were observed for each of traits. According to observations and statistics analysis accessions were separated into two main groups. The characteristics of these groups indicate that taro cultivated in C<span style="white-space:nowrap;">ô</span>te d’Ivoire could belong to two genera: <em>Xanthosoma</em> and <em>Colocasia</em>.展开更多
通过线粒体DNA控制区的结构和多态性来研究中国家鸡和红色原鸡的遗传多态性与系统进化。测定14个中国地方鸡种和红色原鸡2个亚种的256个个体线粒体DNA控制区部分序列约560bp，结果表明，A、C、G、T这4种核苷酸的平均比例分别为25．∞％...通过线粒体DNA控制区的结构和多态性来研究中国家鸡和红色原鸡的遗传多态性与系统进化。测定14个中国地方鸡种和红色原鸡2个亚种的256个个体线粒体DNA控制区部分序列约560bp，结果表明，A、C、G、T这4种核苷酸的平均比例分别为25．∞％、37．40％、4．40％和33．20％。共发现44个变异位点，约占分析位点总数的7．86％，没有观测到插入／缺失，颠换和转换之比为0．13；共具有32种单倍型，9种为共享单倍型；16个群体内单倍型多样度从0到0．964，单倍型变异度总体为0．909±0．014，整体的平均核苷酸差异数为7．276，核苷酸多样度为1．851％。群体间核苷酸分歧度（Dxy）在0．747％～3．125％之间变化，核苷酸净遗传距离（Da）为0．015％～2．633％。16个群体表现出较高水平的遗传多态性，群体间表现出显著的遗传分化。群体遗传多态性和亲缘关系分析表明，一些中国家鸡的群体（如固始鸡和仙居鸡）起源于泰国红色原鸡Gallus gallu sgallus亚种，一些中国家鸡的群体（如茶花鸡和藏鸡等）起源于中国红色原鸡Gallus gallus spadiceus亚种，在一些中国地方鸡种还同时具有这2种红色原鸡的遗传贡献；认为中国家鸡起源于泰国或单纯起源于中国的观点都是不全面的。展开更多
基金Supported by the Foundation for Innovation Research Groups of the National Natural Science Foundation of China(No.51321065)Tianjin Research Program of Application Foundation and Advanced Technology(No.12JCZDJC29200)Tianjin Natural Science Foundation(No.13JCYBJC19500)
文摘In most studies of tunnel boring machine(TBM)tunnelling, the groundwater pressure was not considered, or was simplified and exerted on the boundary of lining structure. Meanwhile, the leakage, which mainly occurs in the segment joints, was often ignored in the relevant studies of TBM tunnelling. Additionally, the geological models in these studies were simplified to different extents, and mostly were simplified as homogenous bodies. Considering the deficiencies above, a 3D refined model of the surrounding rock of a tunnel is firstly established using NURBS-TIN-BRe P hybrid data structure in this paper. Then the seepage field of the surrounding rock considering the leakage in the segment joints is simulated. Finally, the stability of TBM water diversion tunnel is studied coupled with the seepage simulation, to analyze the stress-strain conditions, the axial force and the bending moment of tunnel segment considering the leakage in the segment joints. The results illustrate that the maximum radial displacement, the minimum principal stress, the maximum principal stress and the axial force of segment lining considering the seepage effect are all larger than those disregarding the seepage effect.
基金the financial and logistical support of the Ity Mining Company(SMI).
文摘On the Cavally River, located on the border between C?te d’Ivoire and Liberia, several hydraulic structures such as bridges and diversion channels are planned to be made in recent years in the operating perimeter of the Ity mining company. A 1D-2D hydraulic model was developed to design a diversion channel to cut a meander of the Cavally River in order to ensure hydraulic operation similar to the initial conditions of the river (water levels, flow and velocities). This model was designed with a flow rate of 240 m3/s and a Manning coefficient of 0.052 m1/3·s-1 for the minor bed and 0.06 m1/3·s-1 for the major bed. The results from the hydraulic model show that the hydraulic conditions (water levels, velocities) in the channel before and after the diversion remain almost like those of the Cavally River.
基金the financial support from the National Nature Science Foundation of China (NSFC) under Grant Nos. 39900019, 30070129 and 30670315the Global Environmental Research Fund of the Ministry of the Environment of Japan
文摘Picea mongolica W. D. Xu is an endemic and endangered species which is only found in semi-arid areas of northern China. It has been widely used as an afforestation tree in the establishment of the Three-North Shelterbelt System for its adaptation to arid soils and as a virescent tree in urban gardens and streets for its beautiful shape. Due to different microenvironments, P. mongolica populations may differentiate into many ecological groups with different adaptive abilities. Long-term adaptation to a dry environment makes P. mongolica differentiate into different ecotypes. Typical ecotypes are P. mongolica f. purpurea （Fp）, P. mongolica f. rubra （Fr） and P. mongolica f. viridis （Fv）. Our results show that cone size is clearly not uniform among different ecotypes; the largest cones are found in the Fv ecotype and the smallest in Fp. There were also distinct differences between these ecotypes in terms of height and length of squama. At the molecular level, the zymograms of peroxidase and lipase prove the existence of different ecotypes in P. mongolica. The results are useful for investigating and managing this rare spruce species in China.
基金supported by the Basic Work of Science and Technology Project, China (2014FY120800)the Science and Technology Project of Guangdong Province, China (2014YT02H042, 2014B020202001)
文摘Indigenous pigs in South China are valuable genetic resources with many specific and unique characters, which have played an important role in the establishment of some western modern pig breeds. However, the origin and genetic diversity of indigenous pigs in South China have not been fully understood. In the present study, we sequenced 534 novel mitochondrial DNA (mtDNA) D-loop and assembled 54 complete mitogenome sequences for all 17 indigenous pig breeds from Fujian, Guangdong, Guangxi and Hainan in South China. These data were analyzed together with previously published homologous sequences relevant to this study. We found that all 13 coding genes of the mitogenomes were under purifying selection, but ND1 had the most variable sites and CYTB contained the most non-synonymous SNPs. Phylogenetic analysis showed that all indigenous pigs in South China were clustered into the D haplogroup with D1a1, D1b, D1c and D1e sub-haplogroups found to be dominant. Haplotype and nucleotide diversities of D-loop sequences ranged from 0.427 to 0.899 and from 0.00342 to 0.00695, respectively, among which all pigs in Guangdong had the lowest diversity. The estimates of pairwise FST, gene flow (Nm) and genetic distance (Da) indicated that most of these indigenous pig breeds differentiated from each other significantly (P<0.05). Among the western modern breeds, Berkshire and Yorkshire had significant Asian matrilineal footprints from indigenous pigs in South China, especially the Spotted pigs distributed in Guangdong and Guangxi. The neutrality test (Fu’s FS) indicated that indigenous pigs from Fujian and Guangxi had gone through recent population expansion events (P<0.05). It is concluded that indigenous pigs in South China were most likely derived from the Mekong region and the middle and downstream regions of Yangtze River through Guangxi and Fujian. Our findings provide a complete and in-depth insight on the origin and distribution pattern of maternal genetic diversity of indigenous pigs in South China.
文摘[目的]研究庆阳驴养殖群体的遗传多样性与母系起源,了解其遗传信息,为保护庆阳驴种质资源、选育和遗传改良工作提供理论依据。[方法]随机选取133头庆阳驴,对其线粒体DNA(mitochondrial DNA,mtDNA)D-loop区序列进行PCR扩增、测序及比对,并探讨庆阳驴的遗传多样性与母系起源。[结果]在获得的520 bp D-loop碱基序列中,AT含量(57.3%)高于GC含量(42.8%),表现出碱基的偏倚性;检测到38个变异位点,包含8个碱基对的转换;其核苷酸多样性(Pi)、单倍型多样性(Hd)、平均核苷酸差异(K)分别为0.01591、0.895和8.274,与欧洲家驴和中国家驴研究的平均值相比较低,说明该驴品种核苷酸变异较为贫乏。庆阳驴mtDNA D-loop区存在35个单倍型,单倍型之间的遗传距离为0.002~0.042。系统进化结果显示,庆阳驴存在2个线粒体支系,表明其具有2个母系起源,且遗传距离表明,庆阳驴与克罗地亚家驴之间的遗传距离较近。[结论]本研究从分子水平初步揭示庆阳驴核苷酸变异比较贫乏,杂交程度高,mtDNA遗传多态性正逐步丧失,应加强庆阳驴品种的遗传资源保护工作。
文摘Taro is an important crop species in C<span style="white-space:nowrap;">ô</span>te d’Ivoire. It is cultivated for its tubers and leaves. But its knowledge and genetic diversity and differentiation are very weakly documented. Several morphological types are found in rural area, but their identification is not very clear, and their agronomic potentiality is underexploited. In this context we initiated a survey and collected 213 accessions from 14 growing regions of C<span style="white-space:nowrap;">ô</span>te d’Ivoire. The diversity was evaluated based on seven qualitative traits of leaves (Shape of the base of the leaf, Predominant position (shape) of the leaf blade surface, Margin of the leaf blade, Leaf blade variegation, Profile of the petiolar junction, Shape of the leaf sheath, Shape of the appendix) during an experimentation conducted in rural area. The objective of this study was to characterize the collection of taros collected in different geographical zones of C<span style="white-space:nowrap;">ô</span>te d’Ivoire and identify the genera cultivated. Results of our study indicated that excepted margin of the leaf blade all traits are very discriminant. Several variants were observed for each of traits. According to observations and statistics analysis accessions were separated into two main groups. The characteristics of these groups indicate that taro cultivated in C<span style="white-space:nowrap;">ô</span>te d’Ivoire could belong to two genera: <em>Xanthosoma</em> and <em>Colocasia</em>.
文摘通过线粒体DNA控制区的结构和多态性来研究中国家鸡和红色原鸡的遗传多态性与系统进化。测定14个中国地方鸡种和红色原鸡2个亚种的256个个体线粒体DNA控制区部分序列约560bp，结果表明，A、C、G、T这4种核苷酸的平均比例分别为25．∞％、37．40％、4．40％和33．20％。共发现44个变异位点，约占分析位点总数的7．86％，没有观测到插入／缺失，颠换和转换之比为0．13；共具有32种单倍型，9种为共享单倍型；16个群体内单倍型多样度从0到0．964，单倍型变异度总体为0．909±0．014，整体的平均核苷酸差异数为7．276，核苷酸多样度为1．851％。群体间核苷酸分歧度（Dxy）在0．747％～3．125％之间变化，核苷酸净遗传距离（Da）为0．015％～2．633％。16个群体表现出较高水平的遗传多态性，群体间表现出显著的遗传分化。群体遗传多态性和亲缘关系分析表明，一些中国家鸡的群体（如固始鸡和仙居鸡）起源于泰国红色原鸡Gallus gallu sgallus亚种，一些中国家鸡的群体（如茶花鸡和藏鸡等）起源于中国红色原鸡Gallus gallus spadiceus亚种，在一些中国地方鸡种还同时具有这2种红色原鸡的遗传贡献；认为中国家鸡起源于泰国或单纯起源于中国的观点都是不全面的。
基金This work was supported by the National Basic Research Program of China (No. 2004CB117506) and the National Natural Science Foundation of China (No. 30471239).
