Hepatitis D virus (HDV) infection is present worldwide and affects all age groups. Around 18 million people are estimated to be infected with HDV. An important trend in HDV infection is global decline. HDV prevalence ...Hepatitis D virus (HDV) infection is present worldwide and affects all age groups. Around 18 million people are estimated to be infected with HDV. An important trend in HDV infection is global decline. HDV prevalence has decreased significantly in Europe since the 1970s and 1980s when it was f irst reported. The Asia-Pacif ic region now seems to be where HDV is a major health concern. There is a lack of available data from most of the countries from this region; hence, the true status of HDV cannot be determined. In South Asia, most of the countries have conditions that are favorable for the spread of hepatitis B and other related infections. Countries like Pakistan and Iran have shown an increase in HDV prevalence over a period of time. Other countries and region like China, Turkey, Australia, Japan, India and Taiwan, some of which had very high HDV prevalence in the past, have shown a decline in the incidence, but high prevalence persists in some. Intravenous drug abusers, homosexual men and women, prostitutes, and people on hemodialysis are the groups with very high HDV prevalence.展开更多
Two species Lefua echigonia and Lefua sp. 2 of the eight-barbel loach inhabit the Tokai region of Honshu, Japan. We determined sequences of the mitochondrial D-loop region to elucidate intraspecific phylogenetic relat...Two species Lefua echigonia and Lefua sp. 2 of the eight-barbel loach inhabit the Tokai region of Honshu, Japan. We determined sequences of the mitochondrial D-loop region to elucidate intraspecific phylogenetic relationships and variation in these two species. Lefua sp. 2 represented high intraspecific genetic similarity and complicated haplotype network, but three assemblages were recognized, including specimens mainly from Yahagi, Toyo, and Tenryu River systems, respectively, and named Groups 1 to 3. Divergence of Group 1 from the others was marginally supported, but Group 2 was paraphyletic to Group 3, suggesting the existence of two populations, i.e. Yahagi River population and Toyo-Tenryu River population. Lefua echigonia also represented high intraspecific genetic similarity, and two assemblages with slight genetic differentiation were discernible, including specimens from Shizuoka and southeastern Aichi prefectures and those from northwestern Aichi, Gifu, and Mie prefectures, respectively, and named Groups A and B. Star-like relationships of haplotypes suggested the dispersal origin located in eastern Aichi prefecture. The two species are threatened to extinction and thus we proposed evolutionary significant units for conservation.展开更多
The magma system of Changbaishan-Tianchi Volcanic region is studied with three-dimensional deep seismic sounding (DSS) technique. The results show that the magma system of Changbaishan-Tianchi volcanic region, mainly ...The magma system of Changbaishan-Tianchi Volcanic region is studied with three-dimensional deep seismic sounding (DSS) technique. The results show that the magma system of Changbaishan-Tianchi volcanic region, mainly characterized by low velocity of P wave, can be divided into three parts in terms of depth. At the depth range of 9-15 km, the distribution of the magma system is characterized by extensiveness, large scale and near-SN orientation. This layer is the major place for magma storage. From the depth of 15 km down to the lower crust, it is characterized by small lateral scale, which indicates the "trace" of magma intrusion from the upper mantle into the crust and also implies that the magma system most probably extends to the upper mantle, or even deeper.(less than 8-9 km deep), the range of magma distribution is even smaller, centering on an SN-oriented area just north of the Tianchi crater. If low velocity of P wave is related to the magma system, it then reflects that the magma here is still in a state of relatively high temperature. In this sense, the magma system of Changbaishan-Tianchi volcanic region is at least not "remains", in other words, it is in an "active" state.展开更多
Using seismic shear phases from 47 Tonga-Fiji and its adjacent region events recorded by the CENC and IRIS, and from 26 northeast Asia and north Pacific events recorded by IRIS, we studied the shear wave anisotropy in...Using seismic shear phases from 47 Tonga-Fiji and its adjacent region events recorded by the CENC and IRIS, and from 26 northeast Asia and north Pacific events recorded by IRIS, we studied the shear wave anisotropy in D" region beneath the western Pacific utilizing the ScS-S differential travel time method and obtained the splitting time values between the radial and transverse components of each ScS wave corresponding to each core-mantle boundary (CMB) reflection point. We found that most shear waves involved horizontally polarized shear wave components traveling faster than vertically polarized shear wave components through the D" region. The splitting time values of ScS wave range from ?0.91 s to 3.21 s with an average value of 1.1 s. The strength of anisotropy varies from ?0.45% to 1.56% with an average value of 0.52%. The observations and analyses show that in the D" region beneath the western Pacific the lateral flow is expected to be dominant and the vertical transverse isotropy may be the main anisotropic structure. This structure feature may be explained by the shape preferred orientation of the CMB chemical reaction products or partial melt and the lattice preferred orientation of the lower mantle materials caused by the lateral flow at lowermost mantle.展开更多
Primers were designed according to the genomic DNA of red jungle fowl,and the complete sequence of mt DNA D-loop region in Dehua black chicken was obtained.Combined with the D-loop region complete sequence of red jung...Primers were designed according to the genomic DNA of red jungle fowl,and the complete sequence of mt DNA D-loop region in Dehua black chicken was obtained.Combined with the D-loop region complete sequence of red jungle fowl in Gen Bank,the maternal origin of Dehua black chicken was explored.The results showed that the complete sequence of mt DNA D-loop region in Dehua black chicken was 1 231 bp,and the average contents of T,C,A and G were33.5%,26.5%,26.7% and 13.3%,respectively.Phylogenetic analysis showed that Dehua black chicken clustered with red jungle fowl (Gallus gallus spadiceus),suggesting Dehua black chicken probably originated from G.g.spadiceus in Yunnan Province or nearby areas.展开更多
The Alpine region of Uvira District in South-Kivu Province faces low agricultural productivity challenges largely due to human population pressure on the natural resource base. During the dry season, conflicts between...The Alpine region of Uvira District in South-Kivu Province faces low agricultural productivity challenges largely due to human population pressure on the natural resource base. During the dry season, conflicts between crop farmers and livestock breeders are common. This region is located 2500 - 3020 m a.s.l. and is almost inaccessible due to poor road infrastructure. To understand the interactions between natural resources (forests, pastures, soils) and sedentary agriculture, and to propose solutions for sustainable natural resource management, Participatory Rural Appraisal (PRA) sessions covering three farmer group interviews were conducted in July 2010 in Marungu, Kitembe and Kahololo location. The livelihoods of the Banyamulenge have been transformed from pastoralism to a sedentary system with the introduction of crop cultivation after 1980. Maize, bush beans and Irish potatoes are cultivated with limited success because of late crop maturity under the prevailing climatic conditions. Livestock, mainly cattle, sheep and goats is managed under extensive system, relying on natural pasture far from the human settlements. Livestock plays an important role to define people’s wealth and is mainly managed by men. There is a real need of forages during the dry season;however, cultivation of forages is unknown. On the other hand, pastures appear to be degenerating due to overgrazing. Access by farmers to efficient and effective agricultural extension services is fundamental in order to promote locally adapted and profitable crop and livestock production while at the same time, sustaining the productive resource base and security.展开更多
This study analyzed the mitochondrial DNA D-loop hypervariable region 601 bp sequence in 12 Eutamias sibiricus from Heilongjiang area.The result showed that the average contents of A,T,G and C were 33.2%,30.5%,11.8%an...This study analyzed the mitochondrial DNA D-loop hypervariable region 601 bp sequence in 12 Eutamias sibiricus from Heilongjiang area.The result showed that the average contents of A,T,G and C were 33.2%,30.5%,11.8%and 24.5%respectively,the A+T content(63.7%)was obviously higher than the G+C content(36.3%).Thirty-six mutation(approximately 6.0%)sites were found and 9 haplotypes were defined.The mutations types,including transition,transversion and deletion were all found in the detected mtDNA D-loop regions,most of which was transition.The average nucleotide mutational ratio was 1.22%.The nucleotide mutation sites affected the restriction site appearance or disappearance of the restriction site.The research on mtDNA D-loop is focused on the domestic animals and there is no report on Eutamias sibiricus.This study analyzed the mitochondrial DNA D-loop hypervariable in Eutamias sibiricus so as to provide some useful informations for related research in the future.展开更多
Based on the first arrival P and S data of 4 625 regional earthquakes recorded at 174 stations dispersed in the Yunnan and Sichuan Provinces, the 3-D velocity structure of crust and upper mantle in the region is deter...Based on the first arrival P and S data of 4 625 regional earthquakes recorded at 174 stations dispersed in the Yunnan and Sichuan Provinces, the 3-D velocity structure of crust and upper mantle in the region is determined, incorporating with previous deep geophysical data. In the upper crust, a positive anomaly velocity zone exists in the Sichuan basin, whereas a negative anomaly velocity zone exists in the western Sichuan plateau. The boundary between the positive and negative anomaly zones is the Longmenshan fault zone. The images of lower crust and upper mantle in the Longmenshan fault, Xianshuihe fault, Honghe fault and others show the characteristic of tectonic boundary, indicating that the faults likely penetrate the Moho discontinuity. The negative velocity anomalies at the depth of 50 km in the Tengchong volcanic area and the Panxi tectonic zone appear to be associated with the temperature and composition variations in the upper mantle. The overall features of the crustal and the upper mantle structures in the SichuanYunnan region are the lower average velocity in both crust and uppermost mantle, the large crustal thickness variations, and the existence of high conductivity layer in the crust or/and upper mantle, and higher geothermal value. All these features are closely related to the collision between the India and the Asia plates. The crustal velocity in the SichuanYunnan rhombic block generally shows normal value or positive anomaly, while the negative anomaly exists in the area along the large strike-slip faults as the block boundary. It is conducive to the crustal block side-pressing out along the faults. In the major seismic zones, the seismicity is relative to the negative anomaly velocity. Most strong earthquakes occurred in the upper-mid crust with positive anomaly or normal velocity, where the negative anomaly zone generally exists below.展开更多
POM97, an oceanic model, has been used for the first time to the numerical study on the tidal waves of the as Regions around Taiwan. In this paper, we have got the result that the semidiurnal tidal waves of these area...POM97, an oceanic model, has been used for the first time to the numerical study on the tidal waves of the as Regions around Taiwan. In this paper, we have got the result that the semidiurnal tidal waves of these area mainly are the co-operating tides which come from the south of 23’N of the western Pacific. Those semidiurnal tidal waves affecting the Taiwan Straits come respectively from the south and the north entrance of the channel, and the north tidal wave is stronger than the south one. The strongest tidal field is the area from the Meizhou Bay to the Xinhua Bay along the coast of Fujian Province, where the biggest amplitude of the M2 partial tide can reach 240 cm. The strongest tidal cur- rent fields lie in the Penghu watercourse, where the maximum velocity of the M2 partial tide can arrive at 196 m/s. In the horizontal structure of the tidal currets, we have found that there is a stream dot in the north of the channel, besides, there still exist four new ones. As for the vertical structure, it mainly is biassed to the right at the surface, and to the left near the bottom layer.展开更多
文摘[目的]研究庆阳驴养殖群体的遗传多样性与母系起源,了解其遗传信息,为保护庆阳驴种质资源、选育和遗传改良工作提供理论依据。[方法]随机选取133头庆阳驴,对其线粒体DNA(mitochondrial DNA,mtDNA)D-loop区序列进行PCR扩增、测序及比对,并探讨庆阳驴的遗传多样性与母系起源。[结果]在获得的520 bp D-loop碱基序列中,AT含量(57.3%)高于GC含量(42.8%),表现出碱基的偏倚性;检测到38个变异位点,包含8个碱基对的转换;其核苷酸多样性(Pi)、单倍型多样性(Hd)、平均核苷酸差异(K)分别为0.01591、0.895和8.274,与欧洲家驴和中国家驴研究的平均值相比较低,说明该驴品种核苷酸变异较为贫乏。庆阳驴mtDNA D-loop区存在35个单倍型,单倍型之间的遗传距离为0.002~0.042。系统进化结果显示,庆阳驴存在2个线粒体支系,表明其具有2个母系起源,且遗传距离表明,庆阳驴与克罗地亚家驴之间的遗传距离较近。[结论]本研究从分子水平初步揭示庆阳驴核苷酸变异比较贫乏,杂交程度高,mtDNA遗传多态性正逐步丧失,应加强庆阳驴品种的遗传资源保护工作。
文摘Hepatitis D virus (HDV) infection is present worldwide and affects all age groups. Around 18 million people are estimated to be infected with HDV. An important trend in HDV infection is global decline. HDV prevalence has decreased significantly in Europe since the 1970s and 1980s when it was f irst reported. The Asia-Pacif ic region now seems to be where HDV is a major health concern. There is a lack of available data from most of the countries from this region; hence, the true status of HDV cannot be determined. In South Asia, most of the countries have conditions that are favorable for the spread of hepatitis B and other related infections. Countries like Pakistan and Iran have shown an increase in HDV prevalence over a period of time. Other countries and region like China, Turkey, Australia, Japan, India and Taiwan, some of which had very high HDV prevalence in the past, have shown a decline in the incidence, but high prevalence persists in some. Intravenous drug abusers, homosexual men and women, prostitutes, and people on hemodialysis are the groups with very high HDV prevalence.
文摘Two species Lefua echigonia and Lefua sp. 2 of the eight-barbel loach inhabit the Tokai region of Honshu, Japan. We determined sequences of the mitochondrial D-loop region to elucidate intraspecific phylogenetic relationships and variation in these two species. Lefua sp. 2 represented high intraspecific genetic similarity and complicated haplotype network, but three assemblages were recognized, including specimens mainly from Yahagi, Toyo, and Tenryu River systems, respectively, and named Groups 1 to 3. Divergence of Group 1 from the others was marginally supported, but Group 2 was paraphyletic to Group 3, suggesting the existence of two populations, i.e. Yahagi River population and Toyo-Tenryu River population. Lefua echigonia also represented high intraspecific genetic similarity, and two assemblages with slight genetic differentiation were discernible, including specimens from Shizuoka and southeastern Aichi prefectures and those from northwestern Aichi, Gifu, and Mie prefectures, respectively, and named Groups A and B. Star-like relationships of haplotypes suggested the dispersal origin located in eastern Aichi prefecture. The two species are threatened to extinction and thus we proposed evolutionary significant units for conservation.
基金Key project of the Ninth Five-Year plan from China Seismological Bureau (95-11-02-01).Contribution No. RCEG200107, Research Ce
文摘The magma system of Changbaishan-Tianchi Volcanic region is studied with three-dimensional deep seismic sounding (DSS) technique. The results show that the magma system of Changbaishan-Tianchi volcanic region, mainly characterized by low velocity of P wave, can be divided into three parts in terms of depth. At the depth range of 9-15 km, the distribution of the magma system is characterized by extensiveness, large scale and near-SN orientation. This layer is the major place for magma storage. From the depth of 15 km down to the lower crust, it is characterized by small lateral scale, which indicates the "trace" of magma intrusion from the upper mantle into the crust and also implies that the magma system most probably extends to the upper mantle, or even deeper.(less than 8-9 km deep), the range of magma distribution is even smaller, centering on an SN-oriented area just north of the Tianchi crater. If low velocity of P wave is related to the magma system, it then reflects that the magma here is still in a state of relatively high temperature. In this sense, the magma system of Changbaishan-Tianchi volcanic region is at least not "remains", in other words, it is in an "active" state.
基金National Natural Science Foundation of China (40474016).
文摘Using seismic shear phases from 47 Tonga-Fiji and its adjacent region events recorded by the CENC and IRIS, and from 26 northeast Asia and north Pacific events recorded by IRIS, we studied the shear wave anisotropy in D" region beneath the western Pacific utilizing the ScS-S differential travel time method and obtained the splitting time values between the radial and transverse components of each ScS wave corresponding to each core-mantle boundary (CMB) reflection point. We found that most shear waves involved horizontally polarized shear wave components traveling faster than vertically polarized shear wave components through the D" region. The splitting time values of ScS wave range from ?0.91 s to 3.21 s with an average value of 1.1 s. The strength of anisotropy varies from ?0.45% to 1.56% with an average value of 0.52%. The observations and analyses show that in the D" region beneath the western Pacific the lateral flow is expected to be dominant and the vertical transverse isotropy may be the main anisotropic structure. This structure feature may be explained by the shape preferred orientation of the CMB chemical reaction products or partial melt and the lattice preferred orientation of the lower mantle materials caused by the lateral flow at lowermost mantle.
基金Supported by National Natural Science Foundation of China(31372277,31501917,31672382)
文摘Primers were designed according to the genomic DNA of red jungle fowl,and the complete sequence of mt DNA D-loop region in Dehua black chicken was obtained.Combined with the D-loop region complete sequence of red jungle fowl in Gen Bank,the maternal origin of Dehua black chicken was explored.The results showed that the complete sequence of mt DNA D-loop region in Dehua black chicken was 1 231 bp,and the average contents of T,C,A and G were33.5%,26.5%,26.7% and 13.3%,respectively.Phylogenetic analysis showed that Dehua black chicken clustered with red jungle fowl (Gallus gallus spadiceus),suggesting Dehua black chicken probably originated from G.g.spadiceus in Yunnan Province or nearby areas.
文摘The Alpine region of Uvira District in South-Kivu Province faces low agricultural productivity challenges largely due to human population pressure on the natural resource base. During the dry season, conflicts between crop farmers and livestock breeders are common. This region is located 2500 - 3020 m a.s.l. and is almost inaccessible due to poor road infrastructure. To understand the interactions between natural resources (forests, pastures, soils) and sedentary agriculture, and to propose solutions for sustainable natural resource management, Participatory Rural Appraisal (PRA) sessions covering three farmer group interviews were conducted in July 2010 in Marungu, Kitembe and Kahololo location. The livelihoods of the Banyamulenge have been transformed from pastoralism to a sedentary system with the introduction of crop cultivation after 1980. Maize, bush beans and Irish potatoes are cultivated with limited success because of late crop maturity under the prevailing climatic conditions. Livestock, mainly cattle, sheep and goats is managed under extensive system, relying on natural pasture far from the human settlements. Livestock plays an important role to define people’s wealth and is mainly managed by men. There is a real need of forages during the dry season;however, cultivation of forages is unknown. On the other hand, pastures appear to be degenerating due to overgrazing. Access by farmers to efficient and effective agricultural extension services is fundamental in order to promote locally adapted and profitable crop and livestock production while at the same time, sustaining the productive resource base and security.
文摘This study analyzed the mitochondrial DNA D-loop hypervariable region 601 bp sequence in 12 Eutamias sibiricus from Heilongjiang area.The result showed that the average contents of A,T,G and C were 33.2%,30.5%,11.8%and 24.5%respectively,the A+T content(63.7%)was obviously higher than the G+C content(36.3%).Thirty-six mutation(approximately 6.0%)sites were found and 9 haplotypes were defined.The mutations types,including transition,transversion and deletion were all found in the detected mtDNA D-loop regions,most of which was transition.The average nucleotide mutational ratio was 1.22%.The nucleotide mutation sites affected the restriction site appearance or disappearance of the restriction site.The research on mtDNA D-loop is focused on the domestic animals and there is no report on Eutamias sibiricus.This study analyzed the mitochondrial DNA D-loop hypervariable in Eutamias sibiricus so as to provide some useful informations for related research in the future.
基金Foundation item: National Scientific and Technological Development Program (95-973-02-02) the Climb Program (95-S-05-01) of National Scientific and Technological Ministry of China and the State Natural Sciences Foundation of China (49874021).
文摘Based on the first arrival P and S data of 4 625 regional earthquakes recorded at 174 stations dispersed in the Yunnan and Sichuan Provinces, the 3-D velocity structure of crust and upper mantle in the region is determined, incorporating with previous deep geophysical data. In the upper crust, a positive anomaly velocity zone exists in the Sichuan basin, whereas a negative anomaly velocity zone exists in the western Sichuan plateau. The boundary between the positive and negative anomaly zones is the Longmenshan fault zone. The images of lower crust and upper mantle in the Longmenshan fault, Xianshuihe fault, Honghe fault and others show the characteristic of tectonic boundary, indicating that the faults likely penetrate the Moho discontinuity. The negative velocity anomalies at the depth of 50 km in the Tengchong volcanic area and the Panxi tectonic zone appear to be associated with the temperature and composition variations in the upper mantle. The overall features of the crustal and the upper mantle structures in the SichuanYunnan region are the lower average velocity in both crust and uppermost mantle, the large crustal thickness variations, and the existence of high conductivity layer in the crust or/and upper mantle, and higher geothermal value. All these features are closely related to the collision between the India and the Asia plates. The crustal velocity in the SichuanYunnan rhombic block generally shows normal value or positive anomaly, while the negative anomaly exists in the area along the large strike-slip faults as the block boundary. It is conducive to the crustal block side-pressing out along the faults. In the major seismic zones, the seismicity is relative to the negative anomaly velocity. Most strong earthquakes occurred in the upper-mid crust with positive anomaly or normal velocity, where the negative anomaly zone generally exists below.
文摘POM97, an oceanic model, has been used for the first time to the numerical study on the tidal waves of the as Regions around Taiwan. In this paper, we have got the result that the semidiurnal tidal waves of these area mainly are the co-operating tides which come from the south of 23’N of the western Pacific. Those semidiurnal tidal waves affecting the Taiwan Straits come respectively from the south and the north entrance of the channel, and the north tidal wave is stronger than the south one. The strongest tidal field is the area from the Meizhou Bay to the Xinhua Bay along the coast of Fujian Province, where the biggest amplitude of the M2 partial tide can reach 240 cm. The strongest tidal cur- rent fields lie in the Penghu watercourse, where the maximum velocity of the M2 partial tide can arrive at 196 m/s. In the horizontal structure of the tidal currets, we have found that there is a stream dot in the north of the channel, besides, there still exist four new ones. As for the vertical structure, it mainly is biassed to the right at the surface, and to the left near the bottom layer.
