Introduction Electron transfer oxidation of DNA by triplet artificial photonuclease reveals a bright prospect of its application in biology and medicine. Both molecular orbital calculation and laser experiments have ...Introduction Electron transfer oxidation of DNA by triplet artificial photonuclease reveals a bright prospect of its application in biology and medicine. Both molecular orbital calculation and laser experiments have indicated that the homo guanine sequence should be the final localization site of photoexcited hole via long range migration within DNA. However, the direct observation of the produced ion pairs of biomolecules especially the stabilized radical cation DNA or its components is hampered by the overwhelming transient absorption of protonated radical anion of photosensitizers, such as 2-methyl-1,4-naphthaguinonel (MQ).展开更多
The electron transfer reaction between triplet anthraquinone-2-sulfonate with poly-guanylic acid (5) (poly[G]) in acetonitrile-H2O has been investigated by 248 nm laser flash photolysis. The transient absorption spect...The electron transfer reaction between triplet anthraquinone-2-sulfonate with poly-guanylic acid (5) (poly[G]) in acetonitrile-H2O has been investigated by 248 nm laser flash photolysis. The transient absorption spectra of radical cation of poly[G] and radical anion of anthraqunione-2-sulfonate (AQS) arising from electron transfer reaction has been observed simultaneously for the first time. The formation processes of radical cation of poly[G] and radical anion of anthraquinone-2-sulfonate as well as the decay processes of triplet anthraquinone-2-sulfonate have also been observed, the apparent rate constants for the formation and decay of transient species have been determined. The free energy changes in the process of the electron transfer was also calculated.展开更多
The microscopic moleeular theory for electron transfer in a model solvent ishahr developed. The nonlinear response of the solvent molecules is be computedquanitatively in a new way. Adopting computer simulation daa an...The microscopic moleeular theory for electron transfer in a model solvent ishahr developed. The nonlinear response of the solvent molecules is be computedquanitatively in a new way. Adopting computer simulation daa and choosingappropriate reaction coordinae, a reasonable free energy dinram is constructed and thercorganhaion energy for the product state is calculated.展开更多
After the electron transfers from the metal electrode to the Fe3+(H2O)(6) ion, the free energy of activation of this electron transfer reaction is calculated, then using the transition probability which is calculated ...After the electron transfers from the metal electrode to the Fe3+(H2O)(6) ion, the free energy of activation of this electron transfer reaction is calculated, then using the transition probability which is calculated by the perturbed degeneration theory and the Fermi golden rule,, the rate constant is gotten. Compared with the experimental results, it is satisfactory.展开更多
A single potential step chronoabsorptometric method for the determination of ki- netic parameters of simple quasi-reversible reactions is described.It is verified by determining the kinetic parameters for the electror...A single potential step chronoabsorptometric method for the determination of ki- netic parameters of simple quasi-reversible reactions is described.It is verified by determining the kinetic parameters for the electroreduction of ferricyanide.A long-optical-path electro- chemical cell with a plug-in electrode is used.The thickness of solution layer is 0.55 mm展开更多
The NO_2 + NO_2^- electron transfer reaction was studied with DFT-B3LYPmethod at 6-311 + G~* basis set level for the eight selected structures: four species favor thestructure of 'head to head'. The geometry o...The NO_2 + NO_2^- electron transfer reaction was studied with DFT-B3LYPmethod at 6-311 + G~* basis set level for the eight selected structures: four species favor thestructure of 'head to head'. The geometry of transition state was obtained by the linear coordinatemethod. Three parameters, non-adiabatic activation energy (E_(ad)), coupling matrix element (H_(if))and reorganization energy (λ) for electron transfer reaction can be calculated. According to thereorganization energy of the ET reaction, the values obtained from George-Griffith-Marcus (GGM)method (the contribution only from diagonal elements of force constant matrix) are larger than thoseobtained from Hessian matrix method (including the contribution from both diagonal and off-diagonalelements), which suggests that the coupling interactions between different vibrational modes areimportant to the inner-sphere reorganization energy for the ET reactions in gaseous phase. The valueof rate constant was obtained by using above three activation parameters.展开更多
Electron transfer reactions take place readily between 2, 2, 6, 6-tetramethylpiperidine oxoammonium ions (la,lb) and phenothiazines (2a—2g), giving corresponding nitroxides (3a,3b) and phenothiazine radical cations ...Electron transfer reactions take place readily between 2, 2, 6, 6-tetramethylpiperidine oxoammonium ions (la,lb) and phenothiazines (2a—2g), giving corresponding nitroxides (3a,3b) and phenothiazine radical cations (4a—4g). The rate constants for the electron self-exchange reactions between1 and3, as well as between2 and4, are determined by EPR and1HNMR line-broadening effect in acetonitrile. By application of the Marcus theory, the kinetics of the cross exchange reactions between1 and2 is studied.展开更多
DFT/6-311 + g** level calculations are performed tp study the electron transfer bond-breaking reaction of CH3-X. The calculated values are in good agreement with the experimental results or the empirical model. Throug...DFT/6-311 + g** level calculations are performed tp study the electron transfer bond-breaking reaction of CH3-X. The calculated values are in good agreement with the experimental results or the empirical model. Through analyzing the change of the energy and the charge densilty along hte reaction path, the bond-breaking in ET reaction for CH3X is investigated.展开更多
Early events of charge separation in reaction centers (RCs) of bacterial photosynthesis are modeled by kinetic equations with time-dependent rate constants. An illustrative case of regular motion along a “slow” coor...Early events of charge separation in reaction centers (RCs) of bacterial photosynthesis are modeled by kinetic equations with time-dependent rate constants. An illustrative case of regular motion along a “slow” coordinates leading to oscillations in the kinetics is examined. Different schemes of charge separation are investigated. A good fitting of experimental kinetics of native Rba. sphaeroides RCs is achieved in the five states model P*1BAHA↔P*2BAHA↔I↔P+HA↔P+BA with two excited states BAHA and BAHA and three charge separated states I, P+HA and P+BA (P is a primary electron donor, bacteriochlorophyll dimer, BA and HA are an electron acceptor, monomeric bacteriochlorophyll and bacteriopheophytin in active A-branch, respectively). In the model only the first excited state is directly populated by optical excitation. The emission of the two excited states is assumed to be at 905 and 940 nm, respectively. The intermediate state I is assumed to absorb at 1020 nm as well as the P+HA state. The model explains the deep oscillations in the kinetics of the stimulated emission and of the absorption. In the simpler schemes without the I state or with only one excited state the accordance with the experiment is achieved at unreal parameter values. A possible nature of the I and BAHA states and a possible incoherent nature of the oscillations are discussed.展开更多
Pinacol coupling reactions catalyzed by active zinc revealed high activity and extensive suitability. The efficiency of the reaction was improved apparently owing to decreasing reductive potential of zinc. In addition...Pinacol coupling reactions catalyzed by active zinc revealed high activity and extensive suitability. The efficiency of the reaction was improved apparently owing to decreasing reductive potential of zinc. In addition, the results indicated that the zinc activity has a direct relation to the coupling reactivity compared to untreated zinc or other general active zinc.展开更多
In the past decade light-induced electron transfer reactions in photosystem I have been the subject of intensive investigations that have led to the elucidation of some unique characteristics, the most striking of whi...In the past decade light-induced electron transfer reactions in photosystem I have been the subject of intensive investigations that have led to the elucidation of some unique characteristics, the most striking of which is the existence of two parallel, functional, redox active cofactors chains. This process is generally referred to as bidirectional electron transfer. Here we present a review of the principal evidences that have led to the uncovering of bidirectionality in the reaction centre of photosystem I. A special focus is dedicated to the results obtained combining time-resolved spectroscopic techniques, either difference absorption or electron paramagnetic resonance, with molecular genetics, which allows, through modification of the binding of redox active cofactors with the reaction centre subunits, an effect on their physical-chemical properties.展开更多
Alkali metal fullerides (A<sub>n</sub>C<sub>60</sub>) are versatile reagents in synthetic chemistry ofbuckminsterfullerene, for example, controlled chemical functionalizations of buckminster-fu...Alkali metal fullerides (A<sub>n</sub>C<sub>60</sub>) are versatile reagents in synthetic chemistry ofbuckminsterfullerene, for example, controlled chemical functionalizations of buckminster-fullerene might be achieved by using precursors C<sub>60</sub><sup>n-</sup>M in a desired oxidation state.Vapor-transport technique was widely used to investigate the electron-transfer reactionsbetween C<sub>60</sub> and alkali metal. This method, however, required higher temperature condi-tions (200—400℃) and a longer period of reaction time (10—15 d). Direct reactions of C<sub>60</sub>展开更多
A number of electron donors, acceptors and diads containing xanthene dyes were sythesized. When the dyes were excited, the rate constants and the efficiencies of the intermolecular and intramolecular photo-induced ele...A number of electron donors, acceptors and diads containing xanthene dyes were sythesized. When the dyes were excited, the rate constants and the efficiencies of the intermolecular and intramolecular photo-induced electron transfer reactions were determined and calculated. It is found that the photo-induced electron transfer reactions occurred between xanthene dyes and many, including very weak donors or acceptors. The rate constants of intermolecular reactions were controlled by diffusion, and influenced by the reactant concentrations. The laser flash experiments showed that for low reactant concentrations, this kind of reactions took place mainly via the triplet excited state of the dyes. If different electric charges exist with dyes and donors/acceptors, there will be static quenching of the dyes’ fluorescence. The intramolecular electron transfer reactions are independent of the solution concentrations, and they may directly proceed via the singlet excited state of the dyes effectively.展开更多
The electron-transfer (ET) reaction between Fe(CN)64- and copper zinc superoxide dismutase (CuZn-SOD) occurs at the active site of the enzyme. The ET parameters which are sensitive to the denaturation have been used t...The electron-transfer (ET) reaction between Fe(CN)64- and copper zinc superoxide dismutase (CuZn-SOD) occurs at the active site of the enzyme. The ET parameters which are sensitive to the denaturation have been used to determine the conformational changes of the active site induced by guanidine hydrochloride and thermal denaturation. The decreases of ET rates for all the denatured enzyme samples reflect the collapse of the active cavity of enzyme in the unfolding processes. The interesting changes of ET amplitude for the enzyme denatured at different pH values suggest that electrostatic interaction plays an important role in the conformational changes of active site. From the results of the kinetic analyses, it is concluded that the conformational changes of the active site are parallel with the inactivation.展开更多
To test the theory of dissociative electron transfer, a simple model describing the kinetics of electron transfer bond breaking reactions was used. The Hamiltonian of the system was given. The homogeneous and heterog...To test the theory of dissociative electron transfer, a simple model describing the kinetics of electron transfer bond breaking reactions was used. The Hamiltonian of the system was given. The homogeneous and heterogeneous kinetic data fit reasonably well with an activation driving force relationship derived from the Marcus quadratic theory. In the heterogeneous case, there is a good agreement between the theoretical calculation and the experimental result, while in the homogeneous case, a good agreement is only observed for the tertiary halides. This is due to the stability of tertiary radical resulting from the sterical effect.展开更多
文摘Introduction Electron transfer oxidation of DNA by triplet artificial photonuclease reveals a bright prospect of its application in biology and medicine. Both molecular orbital calculation and laser experiments have indicated that the homo guanine sequence should be the final localization site of photoexcited hole via long range migration within DNA. However, the direct observation of the produced ion pairs of biomolecules especially the stabilized radical cation DNA or its components is hampered by the overwhelming transient absorption of protonated radical anion of photosensitizers, such as 2-methyl-1,4-naphthaguinonel (MQ).
文摘The electron transfer reaction between triplet anthraquinone-2-sulfonate with poly-guanylic acid (5) (poly[G]) in acetonitrile-H2O has been investigated by 248 nm laser flash photolysis. The transient absorption spectra of radical cation of poly[G] and radical anion of anthraqunione-2-sulfonate (AQS) arising from electron transfer reaction has been observed simultaneously for the first time. The formation processes of radical cation of poly[G] and radical anion of anthraquinone-2-sulfonate as well as the decay processes of triplet anthraquinone-2-sulfonate have also been observed, the apparent rate constants for the formation and decay of transient species have been determined. The free energy changes in the process of the electron transfer was also calculated.
文摘The microscopic moleeular theory for electron transfer in a model solvent ishahr developed. The nonlinear response of the solvent molecules is be computedquanitatively in a new way. Adopting computer simulation daa and choosingappropriate reaction coordinae, a reasonable free energy dinram is constructed and thercorganhaion energy for the product state is calculated.
文摘After the electron transfers from the metal electrode to the Fe3+(H2O)(6) ion, the free energy of activation of this electron transfer reaction is calculated, then using the transition probability which is calculated by the perturbed degeneration theory and the Fermi golden rule,, the rate constant is gotten. Compared with the experimental results, it is satisfactory.
文摘A single potential step chronoabsorptometric method for the determination of ki- netic parameters of simple quasi-reversible reactions is described.It is verified by determining the kinetic parameters for the electroreduction of ferricyanide.A long-optical-path electro- chemical cell with a plug-in electrode is used.The thickness of solution layer is 0.55 mm
基金ProjectsupportedbytheNaturalScienceFoundationofShandongProvince (No .Y99B0 1) theNationalKeyLaboratoryFoundationofCrystalMaterial(No.S0 1A0 2 )andtheNationalNaturalScienceFoundationofChina (No .2 96 730 5 ) .
文摘The NO_2 + NO_2^- electron transfer reaction was studied with DFT-B3LYPmethod at 6-311 + G~* basis set level for the eight selected structures: four species favor thestructure of 'head to head'. The geometry of transition state was obtained by the linear coordinatemethod. Three parameters, non-adiabatic activation energy (E_(ad)), coupling matrix element (H_(if))and reorganization energy (λ) for electron transfer reaction can be calculated. According to thereorganization energy of the ET reaction, the values obtained from George-Griffith-Marcus (GGM)method (the contribution only from diagonal elements of force constant matrix) are larger than thoseobtained from Hessian matrix method (including the contribution from both diagonal and off-diagonalelements), which suggests that the coupling interactions between different vibrational modes areimportant to the inner-sphere reorganization energy for the ET reactions in gaseous phase. The valueof rate constant was obtained by using above three activation parameters.
基金Project supported by the National Natural Science Foundation of China (Grant No. 29572047)
文摘Electron transfer reactions take place readily between 2, 2, 6, 6-tetramethylpiperidine oxoammonium ions (la,lb) and phenothiazines (2a—2g), giving corresponding nitroxides (3a,3b) and phenothiazine radical cations (4a—4g). The rate constants for the electron self-exchange reactions between1 and3, as well as between2 and4, are determined by EPR and1HNMR line-broadening effect in acetonitrile. By application of the Marcus theory, the kinetics of the cross exchange reactions between1 and2 is studied.
文摘DFT/6-311 + g** level calculations are performed tp study the electron transfer bond-breaking reaction of CH3-X. The calculated values are in good agreement with the experimental results or the empirical model. Through analyzing the change of the energy and the charge densilty along hte reaction path, the bond-breaking in ET reaction for CH3X is investigated.
文摘Early events of charge separation in reaction centers (RCs) of bacterial photosynthesis are modeled by kinetic equations with time-dependent rate constants. An illustrative case of regular motion along a “slow” coordinates leading to oscillations in the kinetics is examined. Different schemes of charge separation are investigated. A good fitting of experimental kinetics of native Rba. sphaeroides RCs is achieved in the five states model P*1BAHA↔P*2BAHA↔I↔P+HA↔P+BA with two excited states BAHA and BAHA and three charge separated states I, P+HA and P+BA (P is a primary electron donor, bacteriochlorophyll dimer, BA and HA are an electron acceptor, monomeric bacteriochlorophyll and bacteriopheophytin in active A-branch, respectively). In the model only the first excited state is directly populated by optical excitation. The emission of the two excited states is assumed to be at 905 and 940 nm, respectively. The intermediate state I is assumed to absorb at 1020 nm as well as the P+HA state. The model explains the deep oscillations in the kinetics of the stimulated emission and of the absorption. In the simpler schemes without the I state or with only one excited state the accordance with the experiment is achieved at unreal parameter values. A possible nature of the I and BAHA states and a possible incoherent nature of the oscillations are discussed.
基金supported by the National Natural Science Foundation of China(No.20472079)
文摘Pinacol coupling reactions catalyzed by active zinc revealed high activity and extensive suitability. The efficiency of the reaction was improved apparently owing to decreasing reductive potential of zinc. In addition, the results indicated that the zinc activity has a direct relation to the coupling reactivity compared to untreated zinc or other general active zinc.
基金国家重点研发计划(2021YFA1502400)国家自然科学基金(22272176,22002166,22125205,22072146,22002158)+2 种基金中国科学院洁净能源创新研究院合作基金(DNL202007)榆林学院-中国科学院洁净能源创新研究院联合基金(YLU-DNL Fund 2022008)中国科学院青年创新促进计划(Y201938)资助项目。
文摘In the past decade light-induced electron transfer reactions in photosystem I have been the subject of intensive investigations that have led to the elucidation of some unique characteristics, the most striking of which is the existence of two parallel, functional, redox active cofactors chains. This process is generally referred to as bidirectional electron transfer. Here we present a review of the principal evidences that have led to the uncovering of bidirectionality in the reaction centre of photosystem I. A special focus is dedicated to the results obtained combining time-resolved spectroscopic techniques, either difference absorption or electron paramagnetic resonance, with molecular genetics, which allows, through modification of the binding of redox active cofactors with the reaction centre subunits, an effect on their physical-chemical properties.
基金Project supported by the National Natural Science Foundation of China and Science Foundation of Shanghai Committee of Science and Technology.
文摘Alkali metal fullerides (A<sub>n</sub>C<sub>60</sub>) are versatile reagents in synthetic chemistry ofbuckminsterfullerene, for example, controlled chemical functionalizations of buckminster-fullerene might be achieved by using precursors C<sub>60</sub><sup>n-</sup>M in a desired oxidation state.Vapor-transport technique was widely used to investigate the electron-transfer reactionsbetween C<sub>60</sub> and alkali metal. This method, however, required higher temperature condi-tions (200—400℃) and a longer period of reaction time (10—15 d). Direct reactions of C<sub>60</sub>
文摘A number of electron donors, acceptors and diads containing xanthene dyes were sythesized. When the dyes were excited, the rate constants and the efficiencies of the intermolecular and intramolecular photo-induced electron transfer reactions were determined and calculated. It is found that the photo-induced electron transfer reactions occurred between xanthene dyes and many, including very weak donors or acceptors. The rate constants of intermolecular reactions were controlled by diffusion, and influenced by the reactant concentrations. The laser flash experiments showed that for low reactant concentrations, this kind of reactions took place mainly via the triplet excited state of the dyes. If different electric charges exist with dyes and donors/acceptors, there will be static quenching of the dyes’ fluorescence. The intramolecular electron transfer reactions are independent of the solution concentrations, and they may directly proceed via the singlet excited state of the dyes effectively.
基金Project supported by China Postdoctoral Science Foundation and the National Natural Science Foundation of China.Abbteviation: CuZn-SOD,copper zinc superoxide dismutase ET, electron-transfer+1 种基金GuHCl,guanidine hydrochlorideMES, 2-morpholinoethane sulfonic
文摘The electron-transfer (ET) reaction between Fe(CN)64- and copper zinc superoxide dismutase (CuZn-SOD) occurs at the active site of the enzyme. The ET parameters which are sensitive to the denaturation have been used to determine the conformational changes of the active site induced by guanidine hydrochloride and thermal denaturation. The decreases of ET rates for all the denatured enzyme samples reflect the collapse of the active cavity of enzyme in the unfolding processes. The interesting changes of ET amplitude for the enzyme denatured at different pH values suggest that electrostatic interaction plays an important role in the conformational changes of active site. From the results of the kinetic analyses, it is concluded that the conformational changes of the active site are parallel with the inactivation.
基金theNaturalScienceFoundationofShandongProvince (No .Y99B0 1) theNationalKeyLaboratoryFoundationofCrystalMaterialtheNationalNaturalScienceFoundationofChina (No.2 96 730 5 )
文摘To test the theory of dissociative electron transfer, a simple model describing the kinetics of electron transfer bond breaking reactions was used. The Hamiltonian of the system was given. The homogeneous and heterogeneous kinetic data fit reasonably well with an activation driving force relationship derived from the Marcus quadratic theory. In the heterogeneous case, there is a good agreement between the theoretical calculation and the experimental result, while in the homogeneous case, a good agreement is only observed for the tertiary halides. This is due to the stability of tertiary radical resulting from the sterical effect.