期刊文献+
共找到4篇文章
< 1 >
每页显示 20 50 100
免疫抑制剂代谢相关基因多态性检测芯片的研制及其在肝移植患者中的应用 被引量:2
1
作者 姜楠 李洋 +7 位作者 胥顺 傅斌生 汪国营 李华 汪根树 张剑 杨扬 陈规划 《器官移植》 CAS CSCD 2013年第3期127-135,共9页
目的建立一种快速、准确的检测免疫抑制剂常见代谢相关基因多态性的微阵列芯片技术,明确肝移植供、受体细胞色素P450家族细胞色素3A5(cytochrome P4503A5,CYP3A5)及多药耐药1(multidrug resistance1,MDR1)基因多态性对术后患者他克莫司(... 目的建立一种快速、准确的检测免疫抑制剂常见代谢相关基因多态性的微阵列芯片技术,明确肝移植供、受体细胞色素P450家族细胞色素3A5(cytochrome P4503A5,CYP3A5)及多药耐药1(multidrug resistance1,MDR1)基因多态性对术后患者他克莫司(FK506)浓度/剂量比(C/D)的影响。方法选取CYP3A5和MDR1基因外显子的8个常见变异基因位点(CYP3A5Exon1、Exon2、Exon3、Exon13和MDR1Exon1、Exon12、Exon21、Exon26)设计特异性野生型、突变型引物检测探针,通过AD3200微阵列芯片点样仪点样于醛基基片上,室温保湿过夜固定。采用该基因芯片对109份肝移植供、受者全血标本进行检测,每份样本重复检测3次,GenePix4100共聚焦扫描仪阅读芯片,GenePixPro410芯片图像分析软件分析结果,根据同一检测位点野生型探针和突变型探针在阴阳性状态的信号值比值来确定探针的切值(cut-off值)。引物探针和样本微阵列芯片检测结果与脱氧核糖核酸(DNA)测序作比对进行验证。进一步分析临床资料完整的32例肝移植患者,比较供、受体CYP3A5和MDR1基因多态性对患者FK506C/D值的影响。结果芯片样点分布均匀、清晰、规整度好、无漏点和连点,突变型探针和野生型探针的荧光信号强度区分明显;按照突变型探针和野生型探针的荧光强度比值设定cut-off值,结果易于判断,芯片检测结果与测序结果符合率高达99%。供体CYP3A5基因Exon3第6986位点A/G单核苷酸多态性(CYP3A5*3)与FK506C/D值有关,术后2、4、12周供体CYP3A5*1/*1和*1/*3型患者的FK506C/D值明显低于*3/*3型患者(均为P<0.05),而供、受体CYP3A5其它基因型及供受体MDR1各基因型组间FK506C/D值相比差异无统计学意义(均为P>0.05)。结论供体CYP3A5基因第6986位点携带*1等位基因的患者需更高剂量FK506才能达到目标血药浓度。CYP3A5和MDR1基因多态性的微阵列芯片技术的检测效果理想,可重复性强,为肝移植术后免疫抑制剂的个体化用药提供可靠的参考指标。 展开更多
关键词 微阵列芯片技术 寡核苷酸序列分析 基因位点 他克莫司 细胞色素3A5 多药耐药基因
下载PDF
Effects of Radix Aconiti Lateralis Preparata and Rhizoma Zingiberis on Energy Metabolism and Expression of the Genes Related to Metabolism in Rats 被引量:6
2
作者 于华芸 王世军 +4 位作者 滕佳林 季旭明 吴智春 马清翠 付先军 《Chinese Journal of Integrative Medicine》 SCIE CAS 2012年第1期23-29,共7页
Objective: To study the influence of Radix aconiti lateralis preparata and Rhizoma zingiberis, two species of Chinese medicinal herbs with hot property, on energy metabolism and gene expression spectrum, and to analy... Objective: To study the influence of Radix aconiti lateralis preparata and Rhizoma zingiberis, two species of Chinese medicinal herbs with hot property, on energy metabolism and gene expression spectrum, and to analyze the possible mechanism of their effects. Methods: Forty-eight specific pathogen free Wistar rats were randomly divided into a Radix aconiti lateralis preparata group, a Rhizoma zingiberis group, and a control group. They were intragastrically treated with concentrated decoction of Radix aconiti lateralis preparata, Rhizoma zingiberis and normal saline respectively for 20 days. Toe temperature (TT), energy intake (El), digestible energy (DE), and metabolizable energy (ME) were measured. The content of adenosine triphosphate (ATP) and energy charge (EC) in hepatic tissue were measured with high performance liquid chromatography (HPLC). The activity of ATPase and succinate dehydrogenase (SDH) in the liver were detected with chemical colorimetry. The gene expression in the liver was detected with Illumina's rat Ref-12 gene array. The differential expression genes were selected, annotated and classified based on Gene Ontology (GO). Real-time quantitative reverse-transcriptase PCR (Q-RT-PCR) was used to test the accuracy of results. Results: Compared with the control group, the -I-r on the 10^th day after the beginning of administration and ATP in the Radix aconiti lateralis preparata and Rhizoma zingiberis groups increased significantly (P〈0.05). El/body mass (BM), DE/BM, ME/BM, the hepatic EC and the activity of Na^+-K^+-ATPase, Ca^2+-Mg^2+-ATPase and SDH of liver increased significantly only in the Radix aconiti lateralis preparata group (P〈0.05). There were 592 differential expression genes in the Radix aconiti/ateralis preparata group and 1 159 in the Rhizoma zingiberis group compared with the control group. Among the differential expression genes, genes related to metabolic processes were the most significant based on GO analysis. There were 337 strips of gene differential expression in common in both Radix aconiti lateralis preparata and Rhizoma zingiberis groups compared with the control group. Conclusions: Herbs with hot property such as Radix aconiti lateralis preparata and Rhizoma zingiberis could improve the energy metabolism in rats, through influencing the metabolic process of sugar, lipid, and amino acid. It could also promote the production, storage, and utilization of energy by regulating the gene expression related to metabolism, which may be the main molecular mechanism of warming yang and dispelling cold for the treatment of the cold syndrome according to Chinese medicine theory. 展开更多
关键词 Radix aconiti lateralis preparata Rhizoma zingiberis hot property energy metabolism gene array
原文传递
Microbial community functional structure in response to micro-aerobic conditions in sulfate-reducing sulfur-producing bioreactor 被引量:4
3
作者 Hao Yu Chuan Chen +3 位作者 Jincai Ma Xijun Xu Ronggui Fan Aijie Wang 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2014年第5期1099-1107,共9页
Limited oxygen supply to anaerobic wastewater treatment systems had been demonstrated as an effective strategy to improve elemental sulfur (So) recovery, coupling sulfate reduction and sulfide oxidation. However, li... Limited oxygen supply to anaerobic wastewater treatment systems had been demonstrated as an effective strategy to improve elemental sulfur (So) recovery, coupling sulfate reduction and sulfide oxidation. However, little is known about the impact of dissolved oxygen (DO) on the microbial functional structures in these systems. We used a high throughput tool (GeoChip) to evaluate the microbial community structures in a biological desulfurization reactor under micro-aerobic conditions (DO: 0.02-0.33 rag/L). The results indicated that the microbial community functional compositions and structures were dramatically altered with elevated DO levels. The abundances of dsrA/B genes involved in sulfate reduction processes significantly decreased (p 〈 0.05, LSD test) at relatively high DO concentration (DO: 0.33 mg/L). The abundances of sox and fccA/B genes involved in sulfur/sulfide oxidation processes significantly increased (p 〈 0.05, LSD test) in low DO concentration conditions (DO: 0.09 mg/L) and then gradually decreased with continuously elevated DO levels. Their abundances coincided with the change of sulfate removal efliciencies and elemental sulfur (S^0) conversion efficiencies in the bioreactor. In addition, the abundance of carbon degradation genes increased with the raising of DO levels, showing that the heterotrophic microorganisms (e.g., fermentative microorganisms) were thriving under micro-aerobic condition. This study provides new insights into the impacts of micro-aerobic conditions on the microbial functional structure of sulfate- reducing sulfur-producing bioreactors, and revealed the potential linkage between functional microbial communities and reactor performance. 展开更多
关键词 micro-aerobic condition elemental sulfur recovery microbial community functional gene array
原文传递
GeoChip-based analysis of the microbial community functional structures in simultaneous desulfurization and denitrification process 被引量:3
4
作者 Hao Yu Chuan Chen +5 位作者 Jincai Ma Wenzong Liu Jizhong Zhou Duu-Jong Lee Nanqi Ren Aijie Wang 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2014年第7期1375-1382,共8页
The elemental sulfur (S^0) recover), was evaluated in the presence of hi,ate in two development models of simultaneous desulfurization and denitrification (SDD) process. At the loading rates of 0.9 kg S/(m^3.day... The elemental sulfur (S^0) recover), was evaluated in the presence of hi,ate in two development models of simultaneous desulfurization and denitrification (SDD) process. At the loading rates of 0.9 kg S/(m^3.day) for sulfide and 0.4 kg N/(m^3.day) for nitrate, SO conversion rate was 91.1% in denitrifying sulfide removal (DSR) model which was higher than in integrated simultaneous desulfurization and denitrification (ISDD) model (25.6%). A comprehensive analysis of functional diversity, structure and metabolic potential of microbial communities was examined in two models by using functional gene array (GeoChip 2.0). GeoChip data indicated that diversity indices, community structure, and abundance of functional genes were distinct between two models. Diversity indices (Simpson's diversity index (1/D) and Shannon-Weaver index (H′)) of all detected genes showed that with elevated infiuent loading rate, the functional diversity decreased in ISDD model but increased in DSR model. In contrast to ISDD model, the overall abundance of dsr genes was lower in DSR model, while some functional genes targeting from nitrate-reducing sulfide-oxidizingbacteria {NR-SOB), such as Thiobacillus denitrficans, Sulfurimonas denitrificans, and Paracoccus pantotrophus were more abundant in DSR model which were highly associated with the change of SO conversion rate obtained in two models. The results obtained in this study provide additional insights into the microbial metabolic mechanisms involved in ISDD and DSR models, which in turn will improve the overall performance of SDD process. 展开更多
关键词 Expanded granular sludge bedElemental sulfur recoveryMicrobial communityFunctional gene array
原文传递
上一页 1 下一页 到第
使用帮助 返回顶部