Artificial selection of the Green Revolution gene Semidwarf 1 is implicated in upland rice breeding

Semidwarf breeding has boosted crop production and is a well-known outcome from the first Green Revolution. The Green Revolution gene Semidwarf 1(SD1), which modulates gibberellic acid(GA) biosynthesis, plays a principal role in determining rice plant height. Mutations in SD1 reduce rice plant height and promote lodging resistance and fertilizer tolerance to increase grain production. The plant height mediated by SD1 also favors grain yield under certain conditions. However, it is not yet known whether the function of SD1 in upland rice promotes adaptation and grain production. In this study, the plant height and grain yield of irrigated and upland rice were comparatively analyzed under paddy and dryland conditions. In response to dryland environments, rice requires a reduction in plant height to cope with water deficits. Upland rice accessions had greater plant heights than their irrigated counterparts under both paddy and dryland conditions, and appropriately reducing plant height could improve adaptability to dryland environments and maintain high grain yield formation. Moreover, upland rice cultivars with thicker stem diameters had stronger lodging resistance, which addresses the lodging problem. Knockout of SD1 in the upland rice cultivar IRAT104 reduced the plant height and grain yield, demonstrating that the adjustment of plant height mediated by SD1 could increase grain production in dryland fields. In addition, an SD1 genetic diversity analysis verified that haplotype variation causes phenotypic variation in plant height. During the breeding history of rice, SD1 allelic mutations were selected from landraces to improve the grain yield of irrigated rice cultivars, and this selection was accompanied by a reduction in plant height. Thus, five known mutant alleles were analyzed to verify that functional SD1 is required for upland rice production. All these results suggest that SD1 might have undergone artificial positive selection in upland rice, which provides further insights concerning greater plant height in upland rice breeding.

Physiological Characterization of Green Turning of Rice Seedlings at Different Temperatures

Using early indica rice Zhongzao 39 and japonica rice Xiushui 134 as the experimental materials, the effects of 4 temperature levels after transplantation on turning green, leaf growth, tillering, dry matter accumulation and nutrition absorption were studied using a greenhouse and an artificial climate chest. We found that （1） tillering did not occur and growth of one new leaf took over 15 days at 16℃. New leaf growth took over 10 days and tillering occurred after 15 days of transplanta- tion at 19 ℃. Tillering appeared 10 days after planting and new leaf growth took 5 days between 22 and 25 ℃. This showed that low temperature impeded the turn- ing green of rice seedlings and the temperature must reach above 19 ℃ to ensure timely appearance of new leaf, tillering and turning green in rice seedlings. （2） When the temperature was 10 increased, both 100-seedling dry weight and nitrogen absorption increased. At temperatures lower 11 than 19 ℃, both dry weight incre- ment and nitrogen absorption were low. Nitrogen absorption of all organs increased obviously between 19 and 22 ℃. Thus, 19 ℃ was found to be an minimum tem- perature for plant organs to absorb nutrients. （3）Tiller of seedling cultivated on dry- land soil and substrate grew quickly and tillering occurred about 7 days after trans- planting. After that, the growth rate was about 0.18 tiller per day. For seedlings cultivated in slurry, tillering occurred 10 days after transplanting and the tillers grew at a rate of 0.16 tiller per day. However, substrate choice during the seedling rais- ing stage had no significant influence on leaf age. （4） Japonica rice exhibited stronger resistance to low temperature than indica rice. Tillering began at about the same time after transplanting in both rice varieties, but japonica rice exhibited higher tillering speed than early indica rice. The speed of leaf growth was higher in japoni- ca rice before transplantation but higher in indica rice after transplantation.

Key Techniques of an Ecological Pattern“Planting Rice in One Season and Breeding Red Swamp Crawfish in Three Seasons” for Green Production in Lixiahe Region of Jiangsu Province

Three big field projects, independent irrigation and drainage facilities, and a blocking net, which are auxiliary projects of a green planting and breeding pattern composed of rice and red swamp crawfish （Procambarus clarkii）, spatial and temporal coupling technology of ＂planting rice in one season and breeding red swamp crawfish in three seasons＂, green fertilization technology, green prevention and control technology, control technology of water level, and throwing technology of bait in Lixiahe region of Jiangsu Province were introduced successively, which can provide technical support for the development of ecological planting and breeding patterns and realization of green production in paddy fields.

Effects of Green Manure Rotation on Rice Growth Dynamics and Nitrogen Uptake and Utilization

This study aimed to comprehensive evaluation of different winter green manure on characterization of nitrogen uptake and utilization, to provide the basis for N fertilizer reasonable operation and characteristics improvement of nitrogen nutrition in rice high-yield cultivation. This experiment was set to compare milk vetch, rapeseed,ryegrass and mixed of green manure on rice yield, rice growth dynamics and nitrogen uptake and utilization in rice. The results showed that among 4 different winter green manure, the treatment of MV-R-R（milk vetch-rice-rice） for the early rice yield was the most than others treatments. Compared with RG-R-R（ryegrass-rice-rice）, RPR-R（rapeseed-rice-rice）, MS-R-R（mixed green manure-rice-rice）, the treatment of MVR-R inceased by 6.61%, 3.29%, 0.78%, respectively. The treatment of MV-R-R in N content in plant of rice was maximized in the tillering, booting, heading and maturity periods, respectively higher than the average of other treatments 9.68%, 19.72%,6.23% and 8.66%. At tillering, booting, heading and maturity, the treatment of MV-R-R were the highest in N uptake, RP-R-R minimum. The N periodic accumulation for MV-R-R were higher than other treatments in the tillering to booting, booting to heading and heading to maturity periods. The rates respectively were 21.81%, 68.73% and286.5%. In addition, N periodic accumulation and its ratio to total in the heading to maturity was minimum, maximum before tillering under green manure rotation system.So the cropping system of milk vetch-rice-rice could increase nitrogen use efficiency and improve N cycling.

Identification and Fine Mapping of a Gene Related to Pale Green Leaf Phenotype near the Centromere Region in Rice(Oryza sativa)

A thermo-insensitive pale green leaf mutant （pgl2） was isolated from T-DNA inserted transgenic lines of rice （Oryza sativa L. subsp, japonica cv. Nipponbare）. Genetic analysis indicated that the phenotype was caused by a recessive mutation in a single nuclear-encoded gene. To map the PGL2gene, an F2 population was constructed by crossing the mutant with Longtefu （Oryza sativa L. subsp, indica）. The PGL2 locus was roughly linked to SSR marker RM331 on chromosome 8. To finely map the gene, 14 new InDel markers were developed around the marker, and PGL2 was further mapped to a 2.37 Mb centromeric region. Analysis on chlorophyll contents of leaves showed that there was no obvious difference between the mutant and the wild type in total chlorophyll （Chl） content, while the ratio of Chl a / Chl b in the mutant was only about 1, which was distinctly lower than that in the wild type, suggesting that the PGL2 gene was related to the conversion between Chl a and Chl b. Moreover, the method of primer design around the centromeric region was discussed, which would provide insight into fine mapping of the functional genes in plant centromeres.

Long-term rice-rice-green manure rotation changing the microbial communities in typical red paddy soil in South China

On the basis of a long-term（30 years） field experiment that involved four rotation systems, rice-rice-winter fallow（RRF）, rice-rice-ryegrass（RRG）, rice-rice-rape（RRP）, and rice-rice-milk vetch（RRV）, this study described the effects of green manure on the microbial communities in the red paddy soils using 454 pyrosequencing for the 16 S r RNA gene. The Chao1 richness and non-parametric Shannon＇s index increased in all soil samples that received green manure treatments. The communities＇ structures with the green manure applications were significantly dissimilar from that under the winter fallow. Using Metastats tests, many genera in the RRG, RRP and RRV soils were significantly different from those in the RRF soil, including a number of genera that functioned in the nitrogen and sulfur cycles. Analyses of the genera with these functions revealed the shifts in microbial ecosystem functions after long-term green manuring. Changes in the microbial communities increased the ammonium supply and decreased the soil acidification in green-manure-amended soils. Together, these data suggested powerful effects of green manure on both the microbial communities and the biogeochemical cycle driven by the shifts in bacterial functional groups.

Developing green super rice varieties with high nutrient use efficiency by phenotypic selection under varied nutrient conditions

The development of green super rice varieties with improved nutrient use efficiency(NuUE)is a vital target area to increase yield and make it more stable under rainfed conditions.In the present study, we followed an early backcross(BC) breeding approach by using a highyielding and widely adapted Xian variety, Weed Tolerant Rice 1(WTR-1), as a recipient and a Geng variety, Hao-An-Nong(HAN), as a donor.Starting from the BC1F2 generation, the BC population went through one generation of selection under irrigated, low-input, and rainfed conditions, followed by four consecutive generations of screening and selection for high grain yield(GY) under six different nutrient conditions(NPK, 75 N,-N,-P,-NP, and-NPK), leading to the development of 230 BC1F6 introgression lines(ILs).These 230 ILs were evaluated under the same six nutrient conditions for 13 agro-morphological and grain yield component traits in comparison to four checks and parents.Significant trait variations were observed between the treatments and ILs.Positive correlations were identified for GY with biomass, panicle length, flag-leaf area, flag-leaf width, filled grain number per panicle,1000-grain weight, and tiller number under-N,-P,-NP, and-NPK conditions.Out of 230 ILs,12 were identified as promising under two or more nutrient deficiency conditions.The results demonstrated an efficient inter-subspecific BC breeding procedure with a first round of selection under rainfed-drought conditions, followed by four generations of progeny testing for yield performance under six nutrient conditions.The promising ILs can be useful resources for molecular genetic dissection and understanding the physiological mechanisms of NuUE.

Sawah Rice Eco-technology and Actualization of Green Revolution in West Africa: Experience from Nigeria and Ghana

The development and dissemination of sawah rice eco-technology in Nigeria and Ghana as prerequisites for the actualization of green revolution in West Africa were described. It showed that the neglect of the eco-technology and the overemphasis of the biotechnology have rendered the ineffective transferability of the green revolution process from Asia to Africa. The sawah eco-technology increases yield up to 5 t/hm2 through bunding and the use of inlet and outlet connecting irrigation and drainage, which enhances effective water control and management, improves the efficiency of fertilizer, improves nitrogen fixation by soil microbes and algae, increases the use of wetlands, improves soil organic matter accumulation, suppresses weed growth, and enhances immune mechanism of rice through nutrient supply. The current experience has therefore established that the technology overcomes the constraints that have limited the realization of green revolution in West Africa.

Inheritance of the Pale—Green Leaf Marker and Sterility Trait in Photo—Thermo Sensitive Genic Male Sterile Rice

P/TGMS (photo-thermo sensitive genie male sterility) lines with pale-green leaf color have been developed in japonica rice. The marker trait is used as an assistant selection in the production of the two-lines system hybrid rice for the improvement of F, seed purity. A joint inheritance study of both leaf color and male sterility is presented for P/TGMS line with pale-green leaf color. The segregation ratios for leaf color in the F2 populations of the three crosses showed 13 : 3 and 15 : 1 at early and late sowing stages (April 26 and June 23) respectively, implying that the leaf color is controlled by two genes with fertility gene as dominant. Sterility level is higher in the early sowing stage than that in the late sowing. The inducement of male sterility is closely related to longer day-length and higher temperature at the developmental stages of young panicle. The genes to govern the leaf color and male fertility are inherited independently.

Characterization of Resistance to the Green Rice Leafhopper (<i>Nephotettix cincticeps</i>Uhler) in a Core Collection of Landraces in Rice (<i>Oryza sativa</i>L.)

The green rice leafhopper (GRH;Nephotettix cincticeps Uhler) is one of the most devastating insect pests of cultivated rice (Oryza sativa L.) in temperate regions in Asia. Using the rice germplasms with biotic stress resistance is the most effective and environmentally-friendly way to control the insect pests in the paddy. Sixty accessions from a core set of worldwide collection of rice were characterized for resistance to the GRH by antibiosis test both at the seedling and at the booting stages. The positive correlations of average nymph mortality (ANM) were observed between at the seedling stage and at the booting stage on 3 days after infestation (DAI) (r = 0.684**), 5DAI (r = 0.680**), and 7DAI (r = 0.652**), respectively. This result will give us the opportunity to screen resistance to the GRH with the cost-efficient way using rice seedlings in a growth chamber. To classify the 60 accessions evaluated, the ANM of the GRH of each accession was compared to the respective ANM of resistant and susceptible controls with the least significant difference (LSD) value. Based on the statistical difference or similarity of the ANMs to the resistant and the susceptible controls, we proposed the four groups of resistance to the GRH, (I) high level of resistance, (II) considerable level of resistance, (III) moderate level of resistance, and (IV) susceptibility. At the seedling stage, a total of 26 accessions were highly resistant in addition to other 6 for considerable level of resistance and other 10 for moderate level of resistance. At the booting stage, on the other hand, a total of 18 accessions were highly resistant in addition to other 3 for considerable level of resistance and other 5 for moderate level of resistance. A total of 42 accessions with high to moderate level of resistance were distributed across 16 countries in Asia in addition to each one for Madagascar and USA. The classification of landraces based on the present protocol for screening resistance to the insect provided fundamental information for genetics and breeding on resistance to the GRH in rice.

Adsorption of Malachite Green from Aqueous Solutions onto Rice Husks: Kinetic and Equilibrium Studies

A study was done to evaluate the removal of a cationic dye from simulated waste water onto rice husks (RH). Spectroscopic methods such as FTIR and SEM/EDX were used for adsorbent characterization. Experimental dependency on solution pH, initial dye concentration, agitation speed, adsorbentparticle size, temperature of the solution and contact time was evaluated. The adsorption data was tested using both Langmuir and Freundlich isotherms. The data fitted well into Langmuir isotherm model with a monolayer adsorption capacity of 6.5 mg/g. Further, the separation factor (RL) value was less than unity indicating a favorable adsorption process. Adsorption kinetics was determined using pseudo-first-order, pseudo-second-order and intra-particle diffusion models. The results showed that the adsorption of malachite green onto rice husks followed pseudo-second-order model with a determination coefficient of 0.986. This work has revealed that rice husks have a great potential to sequester cationic dyes from aqueous solutions and therefore it can be utilized to clean contaminated effluents.

Green Chemistry Preparation and Characterization of Rice Husk Derived Silica Gel in Kenya

Rice is a grass seed from Oryza glaberrima species also known as the African rice.In Kenya,rice is mostly grown in Central(Mwea)and Nyanza(Ahero,West Kano,Migori and Kuria)areas.Milling rice produces rice husks as by-products which can be sources of valuable chemical products(silica gel,sodium silicate).In trials to produce silica gel from rice husks,rice husks were charred in a combustion chamber(30 min)then ashed in a Muffle furnace(Advantec KL-420)at different temperatures.The ashes were then leached with distilled water/acids to remove metal oxides.Sixty grams(60 g)of the leached RHA(Rice Husk Ash)was mixed with 300 mL of 3 M NaOH solution in a Pyrex 500 mL beaker and boiled at 100℃(1 h).The silica gel samples were characterized using several methods.Elemental analysis was done using TXRF(Total X-Ray Fluorescence),while FTIR(Fourier-Transform Infrared Spectroscopy)was used to obtain an infrared spectrum of absorption of the silica sample.Results of the analysis conform to local and international quality standards.The rice husks had an average moisture content of 7.07%and 1.00-2.00 mm diameter.And 1.74%of the rice husk had pore sizes of about 0.710 mm.The average ash content was 22.65%.At 600℃,leaching with water yielded 98.2%silica compared with 99.1%(H2SO4)and 96.9%(HCl).At 500℃,leaching with HCl/H2SO4 causes a decrease.At 500℃,the availability of SiO2 is more for water leached samples.At 400℃,water leaching gave 98.49%silica while HCl leaching was 97.85%silica and H2SO4 was 99.41%.Silica is a precursor of silica gel.Statistical analyses imply water leaching RHA instead of acid leaching at 500℃ will produce a significant amount of silica gel.The open burn samples produced equal or better SiO2(silica gel precursor)yields compared with the incineration samples.FTIR analysis of the silica gel sample compared well with adsorption peaks of silica gel in literature.XRD(X-Ray Diffraction)analysis produced a pattern consistent with other XRD patterns of silica gel published by other researchers.

Oxidative Stability of Green Tea Extract-Enriched Rice Bran Oil During Storage

Adding green tea extract to rice bran oil was expected to improve its oxidative stability,so this study was conducted to investigate oxidative stability of green tea extract-enriched rice bran oil(RBOG) during storage at 60℃ for 15 days compared to rice bran oil(RBO),olive(OL),canola(CN),and grape-seed oil(GS).Acid values did not increase during storage,and the highest value was found for OL.The peroxide values of RBOG,RBO,CN,OL,and GS increased for up to 15 days.The highest average rate constant for the change in peroxide value was found for RBO(0.282).TBARS increased continually during storage of RBOG,RBO,CN,and OL;however,the value increased for up to 9 days and then decreased for GS.The highest average rate constant of change in TBARS was found for CN.Overall,the results suggest that green tea extract improves oxidative stability of rice bran oil.

Effect of desiccation on regeneration frequency of green plantlets and some biochemical properties of calli of wild rice

Wild rice is an important resource of usefulgenes to rice breeders. However, low regener-ation frequency is an obstacle to use the valu-able genes. We used desiccation to improve theregeneration frequency and studied the bio-chemical changes of calli of wild rice after des-iccation.Materials used in this experiment werewild species O. rufipogon, O. meyeriana, O.alta, and O. brachyantha. Young panicles(0.1-0. 5 cm in length of the inflorescence)

Effect of agar concentration in media on green plantlet regeneration frequency in rice anther culture

We studied the effect of agar concentration inmedia on callus induction rate and green plant-let regeneration frequency in rice.Materialswere Fgeneration of indica/indica or indica/japonica,which were 96E76(Hei’e/Zhaiye- qing 8),96E80[(IR 24/Guanglu＇ai 4//Zhongnan’ai)/Yifengzao],96E86(Zhong- munong 9/Zhaiyeqing 8).The induction mediaused was M8+2mg/L 2,4-D,and agar con-centrations were 0.6％,0.8％,and 1.0％,respectively.Regeneration media was MS+2mg/L KT+0.5mg/L IAA+0.5mg/LNAA,and agar concentrations were 0.6％ and1.0％.Results indicated that the calli induc-

TaqMan探针与SYBR Green实时定量PCR法检测转基因植物外源基因拷贝数的差异分析

探讨TaqMan探针与SYBR Green实时定量PCR 2种方法检测转基因植物外源基因的拷贝数方法的差异。以12株T0转基因水稻为材料,分别用TaqMan与SYBR Green实时定量PCR法检测其拷贝数,然后用SAS 9.1软件对2种方法的结果进行t检验分析。通过SAS对2组数据的t检验分析,在内参基因扩增效率与目的基因扩增效率接近时,SYBR Green与TaqMan探针法的结果接近,差异不显著;当内参基因与目的基因扩增效率差异明显时,SYBR Green与TaqMan探针法差异显著。在内参基因扩增效率与目的基因扩增效率接近时,SYBR Green法测定转基因植物外源基因的拷贝数时结果接近TaqMan探针法。

SYBR~ Green Ⅰ实时PCR检测转Cry1Ab/c基因水稻

为了建立转基因产品新型检测技术,采用SYBR Green Ⅰ实时PCR技术和三对特异引物,检测抗虫转基因水稻外源基因(CaMV35S,NOS,Cry1Ab/c)。结果表明,利用SYBR Green Ⅰ染料能结合双链DNA的特点,应用实时PCR技术可检测到转Cry1Ab/c基因抗虫水稻外源基因(CaMV35S,NOS,Cry1Ab/c)扩增所产生的荧光信号,通过扩增产物的熔解曲线能有效地区分特异性产物、非特异性产物以及引物二聚体。SYBR Green Ⅰ实时PCR技术是转基因成分检测的一种新方法。

水稻黄绿叶基因Yellow-Green Leaf 6(YGL6)的表达模式与蛋白定位

叶色突变既可作为形态标记用于杂交稻育种,又是研究光合系统的结构和功能、叶绿素生物合成及其调控机制的理想材料。EMS(ethyl methane sulfonate)诱变籼稻恢复系"缙恢10号"获得1个稳定遗传的黄绿叶突变体,暂命名为ygl6(yellow-green leaf 6)。前期我们通过图位克隆筛选出候选基因Os12g23180,通过遗传互补实验证实了黄绿叶基因YGL6为Os12g23180,BLASTp分析表明YGL6基因编码NAD(P)-结合的Rossmann折叠超家族蛋白质,属于短链脱氢酶/还原酶家族,推断为异黄酮还原酶、糖脱水酶或mRNA结合蛋白。利用qRT-PCR进行表达模式的分析表明YGL6基因仅在绿色组织如心叶、成熟叶、叶鞘和绿色颖壳中表达,尤其以心叶的表达量最高,同时YGL6基因表达还受光照的诱导。构建亚细胞定位载体,转水稻原生质体结果表明YGL6蛋白定位于叶绿体。本研究丰富了水稻突变体库,为YGL6基因的功能分析奠定了基础。

Yield potential and nitrogen use efficiency of China's super rice

In 1996, a mega project that aimed to develop rice varieties with super-high yield potential （super rice） was launched by the Ministry of Agriculture （MOA） in China using a combination of the ideotype approach and intersubspecific heterosis. Significant progress has been made in the last two decades, with a large number of super rice varieties being approved by the MOA and the national average grain yield being increased from 6.21 t ha^-1 in 1996 to 6.89 t ha^-1 in 2015. The increase in yield potential of super rice was mainly due to the larger sink size which resulted from larger panicles. Moreover, higher photosynthetic capacity and improved root physiological traits before heading contributed to the increase in sink size. However, the poor grain filling of the later-flowering inferior spikelets and the quickly decreased root activity of super rice during grain filling period restrict the achievement of high yield potential of super rice. Furthermore, it is widely accepted that the high yield potential of super rice requires a large amount of N fertilizer input, which has resulted in an increase in N consumption and a decrease in nitrogen use efficiency （NUE）, although it remains unclear whether super rice per se is responsible for the latter. In the present paper, we review the history and success of China＇s Super Rice Breeding Pro- gram, summarize the advances in agronomic and physiological mechanisms underlying the high yield potential of super rice, and examine NUE differences between super rice and ordinary rice varieties. We also provide a brief introduction to the Green Super Rice Project, which aims to diversify breeding targets beyond yield improvement alone to address global concerns around resource use and environmental change. It is hoped that this review will facilitate further improvement of rice production into the future.

水稻黄绿叶突变体yellow-green leaf 4的表型鉴定及候选基因定位和功能分析

[目的]本研究旨在对水稻黄绿叶突变体yellow-green leaf 4(ygl4)进行表型分析及基因定位和功能分析,探讨水稻叶绿体发育分子机制。[方法]水稻黄绿叶突变体ygl 4来自粳稻品种‘中花11’化学诱变突变体库。ygl 4与籼稻品种‘N22’杂交构建F_(2)分离群体以进行YGL 4基因定位,并利用实时定量PCR和亚细胞定位等技术对基因进行初步功能分析。[结果]相比于野生型,ygl 4在幼苗2~3叶龄出现黄绿叶症状,在6月下旬移栽大田后,黄绿叶症状加剧,甚至开始出现白化,突变性状可以一直保持到全生育期直到种子成熟。温敏性试验表明,ygl 4突变体在20℃表现出更严重黄化表型。透射电镜观察表明,ygl 4的叶片细胞结构中出现了较多的双膜囊泡结构。基因定位显示,ygl 4突变性状由1个隐性核基因LOC_Os 04g42000突变导致。该基因编码一个核黄素合成途径中的关键酶,6,7-二甲基-8-核糖醇基二氧四氢蝶啶合酶(LS),且突变体叶色表型可被外施核黄素恢复为正常表型。亚细胞定位结果显示YGL4定位于叶绿体。实时定量PCR分析表明,在突变体中,叶绿素暗反应阶段参与5-氨基乙酰丙酸(ALA)到原叶绿素酸酯合成过程的基因表达上调。[结论]水稻YGL 4编码LS基因,并通过调控植物体内核黄素合成途径影响叶色和叶绿体发育。