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笠贝幼虫变态相关基因筛选及分子网络构建 被引量:1
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作者 尹诚 张丽莉 +1 位作者 王国栋 王艺磊 《集美大学学报(自然科学版)》 CAS 2015年第5期339-347,共9页
利用NCBI在线数字化差异显示工具(Digital Differential Display)对笠贝(Lottia gigantea)EST数据库进行筛选,获得笠贝幼虫时期显著差异表达基因203个,其中124个基因有Blast2Go注释结果,这124个基因可以归类成细胞组分、分子功能和生物... 利用NCBI在线数字化差异显示工具(Digital Differential Display)对笠贝(Lottia gigantea)EST数据库进行筛选,获得笠贝幼虫时期显著差异表达基因203个,其中124个基因有Blast2Go注释结果,这124个基因可以归类成细胞组分、分子功能和生物学过程三大类;参与MAPK、Ras、PI3K-Akt、Rap1、c AMP等信号通路;涉及能量代谢、免疫应激、细胞分化、神经发育、细胞骨架、信号传递等生物学过程.将获得的转录子运用Cytoscape软件构建分子相互作用网络,最终获得7个核心转录子.涉及到神经发育、次生壳形成等相关基因调控关系. 展开更多
关键词 笠贝 数字化差异显示 变态相关基因 生物分子网络
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Phylogeny of forkhead genes in three spiralians and their expression in Pacific oyster Crassostrea gigas 被引量:1
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作者 杨梅 许飞 +3 位作者 刘俊 阙华勇 李莉 张国范 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2014年第6期1207-1223,共17页
The Fox genes encode a group of transcription factors that contain a forkhead domain,which forms a structure known as a winged helix.These transcription factors play a crucial role in several key biological processes,... The Fox genes encode a group of transcription factors that contain a forkhead domain,which forms a structure known as a winged helix.These transcription factors play a crucial role in several key biological processes,including development.High-degree identity in the canonical forkhead domain has been used to divide Fox proteins into 23 families(FoxA to FoxS).We surveyed the genome of three spiralians,the oyster Crassostrea gigas,the limpet Lottia gigantea,and the annelid Capitella teleta.We identified 25 C.gigas fox genes,21 L.gigantea fox genes,and 25 C.teleta fox genes.The C.gigas fox and L.gigantea fox genes represented 19 of the 23 families,whereas FoxI,Ql,R,and S were missing.The majority of the Fox families were observed within the C.teleta fox genes,with the exception of FoxR and S.In addition,the foxAB-like gene,foxY-like gene,and foxH gene were also present in the three genomes.The conserved FoxC-FoxL1 cluster,observed in mammals,was also found in C.gigas.The diversity of temporal expression patterns observed across the developmental process implies the C.gigas fox genes exert a wide range of functions.Further functional studies are required to gain insight into the evolution of Fox genes in bilaterians. 展开更多
关键词 太平洋牡蛎 基因编码 系统发育 叉头 转录因子 生物学过程 螺旋结构 环节动物
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