Background:Intestinal microbiota is critical for maintaining animal health and homeostasis.However,involvement of the fungal community,also known as the mycobiota,in animal health and disease is poorly understood.This...Background:Intestinal microbiota is critical for maintaining animal health and homeostasis.However,involvement of the fungal community,also known as the mycobiota,in animal health and disease is poorly understood.This study was aimed to examine the association between the intestinal mycobiota and the severity of necrotic enteritis(NE),an economically significant poultry disease.Methods:A total of 90 day-of-hatch Cobb broilers were infected with Eimeria maxima on d 10,followed by an oral challenge with C.perfringens on d 14 to induce NE,while another 10 broilers were served as mock-infected controls.On d 17,the lesions in the jejunum were scored,and the ileal digesta were subjected to DNA isolation and real-time PCR quantification of total bacterial and fungi populations.Internal transcribed spacer 2(ITS2)amplicon sequencing was also performed to profile the ileal mycobiota composition.Changes in the ileal mycobiota in response to NE were investigated.Spearman correlation analysis was further conducted to identify the correlations between relative abundances of individual ileal fungi and the severity of NE.Results:While the total bacterial population in the ileum was increased by 2-to 3-fold in NE chickens,the total fungal population was progressively declined in more exacerbated NE,with the most severely infected chickens showing a nearly 50-fold reduction relative to mock-infected controls.Richness of the ileal mycobiota also tended to reduce in chickens with NE(P=0.06).Compositionally,among 30 most abundant fungal amplicon sequence variants(ASVs),11 were diminished and 7 were enriched(P<0.05),while 12 remained largely unchanged in NEafflicted chickens(P>0.05).Multiple Wallemia and Aspergillus species were markedly diminished in NE(P<0.05)and also showed a significant negative correlation with NE severity(P<0.05).Conclusions:Dysbiosis of the ileal mycobiota is induced evidently by NE and the extent of the dysbiosis is positively correlated with disease severity.These findings suggest a possible role of the intestinal mycobiota in NE pathogenesis and highlight the mycobiota as a new potential target for NE mitigation in poultry.展开更多
The purpose of the presented work was dedicated to identifying the species composition of the mycobiota of honey bees in Azerbaijan condition. From the samples taken from bees, materials became clear that in the forma...The purpose of the presented work was dedicated to identifying the species composition of the mycobiota of honey bees in Azerbaijan condition. From the samples taken from bees, materials became clear that in the formation of mycobiota those materials (from bees, from where they live and their products) in generally participate 52 species of fungi. Among the recorded fungi, species take part such as Alternaria alternata (Fr.) Keissl., Aspergillus flavus Link, Candida albicans (C.P. Robin) Berkhout, Cladosporium herbarum (Pers.) Link, Penicillium cuclopium Westling, P. granulatum Bainier and etc. which carry features conditionally pathogenicity, toxicity, allergens and danger to biological productivity of bees and as well as to pollution of their products. It is known for a long time to scientists that these species are dangerous for human health. For this reason, preparation of normative documents that reflect the principles of microbiological safety of bee products is a necessary task.展开更多
Endophytic fungi were identified from different parts of the medicinal parasitic mistletoe Cladocolea micrantha and from its host Anacardium occidentale, suggesting a strict host-parasite relationship. Eight fungal en...Endophytic fungi were identified from different parts of the medicinal parasitic mistletoe Cladocolea micrantha and from its host Anacardium occidentale, suggesting a strict host-parasite relationship. Eight fungal endophytes were isolated and morphologically characterized. The ascomycete Guignardia mangiferae and strains of Mycelia sterilia were prevalent in the isolations. The unequivocal identification of Guignardia mangiferae at a probabilistic degree close to 100% was carried out by DNA extraction followed by PCR analyses of the ITS-1 and ITS-2 regions and comparison of the genetic sequence with the NCBI database.展开更多
Background Broad-spectrum antibiotic administration promotes intestinal colonization of exogenous fungal pathogens in healthy animals and has been recognized as one of the risk factors of invasive fungal infection in ...Background Broad-spectrum antibiotic administration promotes intestinal colonization of exogenous fungal pathogens in healthy animals and has been recognized as one of the risk factors of invasive fungal infection in clinical settings. It is unclear whether broad-spectrum antibiotic treatment would change the intestinal mycobiota without exogenous fungal challenge in the context of sepsis. Methods We established a rat model of double-hit sepsis using burn injury and endotoxin challenge. Rats with burn injury or double-hit sepsis received imipenem treatment for 3 days or 9 days, and their colon contents were sampled for selective fungal culture and isolation counts. Results Imipenem treatment promoted the overgrowth of the commensal fungus Geotrichum capitatum in rats with burn injury. Imipenem treatment also promoted colon colonization by exogenous fungi in rats with burn injury and double-hit sepsis, including Trichosporon cutaneum, Candida albicans, Candida krusei, and Candida glabrata. A longer duration of imipenem treatment had a stronger impact on colon colonization by exogenous fungi. Conclusion Imipenem treatment facilitates the overgrowth of commensal fungi and colonization by exogenous, potentially pathogenic fungi in the colons of rats with burn injury or double-hit sepsis.展开更多
Fungal endophytes are receiving increasing attention as resources to improve crop production and ecosystem management.However,the biology and ecological significance of these symbionts remains poorly understood,due to...Fungal endophytes are receiving increasing attention as resources to improve crop production and ecosystem management.However,the biology and ecological significance of these symbionts remains poorly understood,due to a lack of model systems for more efficient research.In this work,we have analyzed the culturable endophytic mycobiota associated,in the wild,with leaves and siliques of the model plant A.thaliana.We have studied the effect of biotic and abiotic factors in the frequency of fungal endophytes in plant specimens,and in the species composition of the endophytic community.Our results indicate that the frequency of Arabidopsis plants hosting endophytes depends on the time of the year and the phenological stage of the plant,and that the probability of endophyte colonization increases as the life cycle of the plant progresses.The diversity of the endophytic assemblages of natural A.thaliana populations was high,and precipitation and temperature were the two main factors determining the diversity and species composition of the communities.We propose A.thaliana and its endophytes as a model system for an integral approach to the principles governing the endophytic lifestyle,taking advantage of the molecular tools and the abundant knowledge accessible from the host plant.展开更多
基金supported by the USDA National Institute of Food and Agriculture (grant no. 2018–68003-27462 and 2018–67011-28041)the Ralph F. and Leila W. Boulware Endowment FundOklahoma Agricultural Experiment Station Project H-3112。
文摘Background:Intestinal microbiota is critical for maintaining animal health and homeostasis.However,involvement of the fungal community,also known as the mycobiota,in animal health and disease is poorly understood.This study was aimed to examine the association between the intestinal mycobiota and the severity of necrotic enteritis(NE),an economically significant poultry disease.Methods:A total of 90 day-of-hatch Cobb broilers were infected with Eimeria maxima on d 10,followed by an oral challenge with C.perfringens on d 14 to induce NE,while another 10 broilers were served as mock-infected controls.On d 17,the lesions in the jejunum were scored,and the ileal digesta were subjected to DNA isolation and real-time PCR quantification of total bacterial and fungi populations.Internal transcribed spacer 2(ITS2)amplicon sequencing was also performed to profile the ileal mycobiota composition.Changes in the ileal mycobiota in response to NE were investigated.Spearman correlation analysis was further conducted to identify the correlations between relative abundances of individual ileal fungi and the severity of NE.Results:While the total bacterial population in the ileum was increased by 2-to 3-fold in NE chickens,the total fungal population was progressively declined in more exacerbated NE,with the most severely infected chickens showing a nearly 50-fold reduction relative to mock-infected controls.Richness of the ileal mycobiota also tended to reduce in chickens with NE(P=0.06).Compositionally,among 30 most abundant fungal amplicon sequence variants(ASVs),11 were diminished and 7 were enriched(P<0.05),while 12 remained largely unchanged in NEafflicted chickens(P>0.05).Multiple Wallemia and Aspergillus species were markedly diminished in NE(P<0.05)and also showed a significant negative correlation with NE severity(P<0.05).Conclusions:Dysbiosis of the ileal mycobiota is induced evidently by NE and the extent of the dysbiosis is positively correlated with disease severity.These findings suggest a possible role of the intestinal mycobiota in NE pathogenesis and highlight the mycobiota as a new potential target for NE mitigation in poultry.
文摘The purpose of the presented work was dedicated to identifying the species composition of the mycobiota of honey bees in Azerbaijan condition. From the samples taken from bees, materials became clear that in the formation of mycobiota those materials (from bees, from where they live and their products) in generally participate 52 species of fungi. Among the recorded fungi, species take part such as Alternaria alternata (Fr.) Keissl., Aspergillus flavus Link, Candida albicans (C.P. Robin) Berkhout, Cladosporium herbarum (Pers.) Link, Penicillium cuclopium Westling, P. granulatum Bainier and etc. which carry features conditionally pathogenicity, toxicity, allergens and danger to biological productivity of bees and as well as to pollution of their products. It is known for a long time to scientists that these species are dangerous for human health. For this reason, preparation of normative documents that reflect the principles of microbiological safety of bee products is a necessary task.
文摘Endophytic fungi were identified from different parts of the medicinal parasitic mistletoe Cladocolea micrantha and from its host Anacardium occidentale, suggesting a strict host-parasite relationship. Eight fungal endophytes were isolated and morphologically characterized. The ascomycete Guignardia mangiferae and strains of Mycelia sterilia were prevalent in the isolations. The unequivocal identification of Guignardia mangiferae at a probabilistic degree close to 100% was carried out by DNA extraction followed by PCR analyses of the ITS-1 and ITS-2 regions and comparison of the genetic sequence with the NCBI database.
基金This study was supported by a grant from the National Natural Science Foundation of China （No. 30472270）.
文摘Background Broad-spectrum antibiotic administration promotes intestinal colonization of exogenous fungal pathogens in healthy animals and has been recognized as one of the risk factors of invasive fungal infection in clinical settings. It is unclear whether broad-spectrum antibiotic treatment would change the intestinal mycobiota without exogenous fungal challenge in the context of sepsis. Methods We established a rat model of double-hit sepsis using burn injury and endotoxin challenge. Rats with burn injury or double-hit sepsis received imipenem treatment for 3 days or 9 days, and their colon contents were sampled for selective fungal culture and isolation counts. Results Imipenem treatment promoted the overgrowth of the commensal fungus Geotrichum capitatum in rats with burn injury. Imipenem treatment also promoted colon colonization by exogenous fungi in rats with burn injury and double-hit sepsis, including Trichosporon cutaneum, Candida albicans, Candida krusei, and Candida glabrata. A longer duration of imipenem treatment had a stronger impact on colon colonization by exogenous fungi. Conclusion Imipenem treatment facilitates the overgrowth of commensal fungi and colonization by exogenous, potentially pathogenic fungi in the colons of rats with burn injury or double-hit sepsis.
基金funded by grants CAM CCG07-UPM/GEN-1899 of DGUI of Comunidad de Madrid and UPM and AGL2008-00818 of Ministerio de Educación y Ciencia of the Spanish Government to Soledad Sacristán.
文摘Fungal endophytes are receiving increasing attention as resources to improve crop production and ecosystem management.However,the biology and ecological significance of these symbionts remains poorly understood,due to a lack of model systems for more efficient research.In this work,we have analyzed the culturable endophytic mycobiota associated,in the wild,with leaves and siliques of the model plant A.thaliana.We have studied the effect of biotic and abiotic factors in the frequency of fungal endophytes in plant specimens,and in the species composition of the endophytic community.Our results indicate that the frequency of Arabidopsis plants hosting endophytes depends on the time of the year and the phenological stage of the plant,and that the probability of endophyte colonization increases as the life cycle of the plant progresses.The diversity of the endophytic assemblages of natural A.thaliana populations was high,and precipitation and temperature were the two main factors determining the diversity and species composition of the communities.We propose A.thaliana and its endophytes as a model system for an integral approach to the principles governing the endophytic lifestyle,taking advantage of the molecular tools and the abundant knowledge accessible from the host plant.
